Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5653
         (470 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    26   0.58 
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    24   2.3  
AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione S-tran...    23   5.4  

>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 26.2 bits (55), Expect = 0.58
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -3

Query: 450 TASRQK*GRAVVLPAPDSRRPPAITQIIILRV*FILHDSFTVEVNREH 307
           T  R +  R      PD R  P +TQ+       +LHDS   E N +H
Sbjct: 371 TVGRTRAARTATDGGPDDRTLPELTQVRDRHAAALLHDSGITE-NGDH 417


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 424 GCGTTRAGLTTSTSNYANY 368
           G GT  AG T STS+ + Y
Sbjct: 686 GAGTASAGTTNSTSSSSGY 704


>AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione
           S-transferase E3 protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +2

Query: 233 NVNDLPMLESHRRVQIFLMKYVLNKCSRLTSTVKESCNIN 352
           N N +P+ +SH  +   + KY  +        + +  NIN
Sbjct: 59  NDNGVPLYDSHAIINYLVQKYAKDDTLYPAKDLVKQANIN 98


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,368
Number of Sequences: 2352
Number of extensions: 8820
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)