Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5643
         (304 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL157903-10|CAI22406.1| 1350|Homo sapiens latrophilin 2 protein.       31   0.66 
M23162-1|AAA59014.1|  134|Homo sapiens IGL@ protein.                   29   2.0  
BC054893-1|AAH54893.1|  230|Homo sapiens IGLV2-14 protein protein.     29   2.0  
AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    29   3.5  
BX641020-1|CAE46013.1|  602|Homo sapiens hypothetical protein pr...    28   4.7  
BX537690-1|CAD97814.1|  509|Homo sapiens hypothetical protein pr...    28   4.7  
BC036831-1|AAH36831.1|  716|Homo sapiens ARID5B protein protein.       28   4.7  
AL671972-2|CAH72686.1| 1188|Homo sapiens modulator recognition f...    28   4.7  
AL671972-1|CAH72685.1|  945|Homo sapiens modulator recognition f...    28   4.7  

>AL157903-10|CAI22406.1| 1350|Homo sapiens latrophilin 2 protein.
          Length = 1350

 Score = 31.1 bits (67), Expect = 0.66
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +3

Query: 75   ICNGKLNTRIQNIQ-GKYFIYVYIKNYF*LSSYKTLTLFHCLLFISTYTIRMGFTLYYYR 251
            +C+G  NT +   +  K FI  ++   F L     LT    LLFI+  TI M +    + 
Sbjct: 905  VCDGYYNTDLPGYEDNKPFIKSWVLGAFALLCLLGLTWSFGLLFINEETIVMAYLFTIFN 964

Query: 252  IYWTLLXFIF 281
             +  +  FIF
Sbjct: 965  AFQGVFIFIF 974


>M23162-1|AAA59014.1|  134|Homo sapiens IGL@ protein.
          Length = 134

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 210 TYTIRMGFTLYYYRIYW 260
           T T+R GF +Y YRIYW
Sbjct: 40  TCTLRRGFYVYDYRIYW 56


>BC054893-1|AAH54893.1|  230|Homo sapiens IGLV2-14 protein protein.
          Length = 230

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 210 TYTIRMGFTLYYYRIYW 260
           T T+R GF +Y YRIYW
Sbjct: 30  TCTLRRGFYVYDYRIYW 46


>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = +3

Query: 126 FIYVYIKNYF*LSSYKTLTLF---HCLLFISTYTIRMGFTLYYYRIYWTLLXFIFIIVTT 296
           ++Y+Y+  YF + +Y  L +F   +  L+I  Y     FT  Y  ++  +   IFI +  
Sbjct: 30  YVYIYLYIYFYIFTYIYLYIFIYIYICLYIYLYIYLYIFTYIYIYLHIFIYLHIFIYICI 89

Query: 297 TL 302
            L
Sbjct: 90  CL 91


>BX641020-1|CAE46013.1|  602|Homo sapiens hypothetical protein
           protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +3

Query: 60  LFRGSICNGKLNTRIQNIQGKYFIYVYIKNYF*LSSYKTLTLFHCLL 200
           L+ GS+CN  LN+R+    G      Y+KN   LS       FH L+
Sbjct: 495 LYSGSLCNSGLNSRLP--AGYSHSLQYLKNQTVLSPLMQPLAFHSLV 539


>BX537690-1|CAD97814.1|  509|Homo sapiens hypothetical protein
           protein.
          Length = 509

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +3

Query: 60  LFRGSICNGKLNTRIQNIQGKYFIYVYIKNYF*LSSYKTLTLFHCLL 200
           L+ GS+CN  LN+R+    G      Y+KN   LS       FH L+
Sbjct: 402 LYSGSLCNSGLNSRLP--AGYSHSLQYLKNQTVLSPLMQPLAFHSLV 446


>BC036831-1|AAH36831.1|  716|Homo sapiens ARID5B protein protein.
          Length = 716

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +3

Query: 60  LFRGSICNGKLNTRIQNIQGKYFIYVYIKNYF*LSSYKTLTLFHCLL 200
           L+ GS+CN  LN+R+    G      Y+KN   LS       FH L+
Sbjct: 609 LYSGSLCNSGLNSRLP--AGYSHSLQYLKNQTVLSPLMQPLAFHSLV 653


>AL671972-2|CAH72686.1| 1188|Homo sapiens modulator recognition factor
            2 (MRF2) protein.
          Length = 1188

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +3

Query: 60   LFRGSICNGKLNTRIQNIQGKYFIYVYIKNYF*LSSYKTLTLFHCLL 200
            L+ GS+CN  LN+R+    G      Y+KN   LS       FH L+
Sbjct: 1081 LYSGSLCNSGLNSRLP--AGYSHSLQYLKNQTVLSPLMQPLAFHSLV 1125


>AL671972-1|CAH72685.1|  945|Homo sapiens modulator recognition
           factor 2 (MRF2) protein.
          Length = 945

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +3

Query: 60  LFRGSICNGKLNTRIQNIQGKYFIYVYIKNYF*LSSYKTLTLFHCLL 200
           L+ GS+CN  LN+R+    G      Y+KN   LS       FH L+
Sbjct: 838 LYSGSLCNSGLNSRLP--AGYSHSLQYLKNQTVLSPLMQPLAFHSLV 882


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,854,320
Number of Sequences: 237096
Number of extensions: 584402
Number of successful extensions: 1061
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)