Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5638
(711 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009575-1|AAH09575.1| 101|Homo sapiens PSENEN protein protein. 124 3e-28
AF220053-1|AAF67646.1| 101|Homo sapiens uncharacterized hematop... 124 3e-28
L05628-1|AAB46616.1| 1531|Homo sapiens multidrug resistance-asso... 30 9.4
EF419769-1|ABN79590.1| 1531|Homo sapiens ATP-binding cassette, s... 30 9.4
AF022853-5|AAB83982.1| 1400|Homo sapiens multidrug resistance pr... 30 9.4
AF022853-4|AAB83981.1| 1456|Homo sapiens multidrug resistance pr... 30 9.4
AF022853-3|AAB83980.1| 1459|Homo sapiens multidrug resistance pr... 30 9.4
AF022853-2|AAB83983.1| 1450|Homo sapiens multidrug resistance pr... 30 9.4
AF022853-1|AAB83979.1| 1515|Homo sapiens multidrug resistance pr... 30 9.4
AC003026-1|AAC05808.1| 691|Homo sapiens Multiple drug resistanc... 30 9.4
AB209120-1|BAD92357.1| 1439|Homo sapiens ATP-binding cassette, s... 30 9.4
>BC009575-1|AAH09575.1| 101|Homo sapiens PSENEN protein protein.
Length = 101
Score = 124 bits (299), Expect = 3e-28
Identities = 51/99 (51%), Positives = 69/99 (69%)
Frame = +2
Query: 62 MDLSKLPNDMKLQLCKSYFKVGCLFLPFVWAVNVCWFFRDAFIKPAYDEQKLIKKFVIMS 241
M+L ++ N+ KL LC+ Y+ G FLPF+W VN+ WFFR+AF+ PAY EQ IK +V S
Sbjct: 1 MNLERVSNEEKLNLCRKYYLGGFAFLPFLWLVNIFWFFREAFLVPAYTEQSQIKGYVWRS 60
Query: 242 AIGAFVWAVILVTWITVYQTNRVSWGATGDALSFIVPLG 358
A+G W ++L +WIT++Q R WGA GD LSF +PLG
Sbjct: 61 AVGFLFWVIVLTSWITIFQIYRPRWGALGDYLSFTIPLG 99
>AF220053-1|AAF67646.1| 101|Homo sapiens uncharacterized
hematopoietic stem/progenitor cells protein MDS033
protein.
Length = 101
Score = 124 bits (299), Expect = 3e-28
Identities = 51/99 (51%), Positives = 69/99 (69%)
Frame = +2
Query: 62 MDLSKLPNDMKLQLCKSYFKVGCLFLPFVWAVNVCWFFRDAFIKPAYDEQKLIKKFVIMS 241
M+L ++ N+ KL LC+ Y+ G FLPF+W VN+ WFFR+AF+ PAY EQ IK +V S
Sbjct: 1 MNLERVSNEEKLNLCRKYYLGGFAFLPFLWLVNIFWFFREAFLVPAYTEQSQIKGYVWRS 60
Query: 242 AIGAFVWAVILVTWITVYQTNRVSWGATGDALSFIVPLG 358
A+G W ++L +WIT++Q R WGA GD LSF +PLG
Sbjct: 61 AVGFLFWVIVLTSWITIFQIYRPRWGALGDYLSFTIPLG 99
>L05628-1|AAB46616.1| 1531|Homo sapiens multidrug
resistance-associated protein protein.
Length = 1531
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 173 FRDAFIKPAYDEQKLIKKFVIMSAIGAFVW 262
F+D + +E K++KK +SA+G F W
Sbjct: 524 FKDKVLAIRQEELKVLKKSAYLSAVGTFTW 553
>EF419769-1|ABN79590.1| 1531|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 1 protein.
Length = 1531
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 173 FRDAFIKPAYDEQKLIKKFVIMSAIGAFVW 262
F+D + +E K++KK +SA+G F W
Sbjct: 524 FKDKVLAIRQEELKVLKKSAYLSAVGTFTW 553
>AF022853-5|AAB83982.1| 1400|Homo sapiens multidrug resistance
protein protein.
Length = 1400
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 173 FRDAFIKPAYDEQKLIKKFVIMSAIGAFVW 262
F+D + +E K++KK +SA+G F W
Sbjct: 508 FKDKVLAIRQEELKVLKKSAYLSAVGTFTW 537
>AF022853-4|AAB83981.1| 1456|Homo sapiens multidrug resistance
protein protein.
Length = 1456
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 173 FRDAFIKPAYDEQKLIKKFVIMSAIGAFVW 262
F+D + +E K++KK +SA+G F W
Sbjct: 508 FKDKVLAIRQEELKVLKKSAYLSAVGTFTW 537
>AF022853-3|AAB83980.1| 1459|Homo sapiens multidrug resistance
protein protein.
Length = 1459
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 173 FRDAFIKPAYDEQKLIKKFVIMSAIGAFVW 262
F+D + +E K++KK +SA+G F W
Sbjct: 508 FKDKVLAIRQEELKVLKKSAYLSAVGTFTW 537
>AF022853-2|AAB83983.1| 1450|Homo sapiens multidrug resistance
protein protein.
Length = 1450
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 173 FRDAFIKPAYDEQKLIKKFVIMSAIGAFVW 262
F+D + +E K++KK +SA+G F W
Sbjct: 508 FKDKVLAIRQEELKVLKKSAYLSAVGTFTW 537
>AF022853-1|AAB83979.1| 1515|Homo sapiens multidrug resistance
protein protein.
Length = 1515
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 173 FRDAFIKPAYDEQKLIKKFVIMSAIGAFVW 262
F+D + +E K++KK +SA+G F W
Sbjct: 508 FKDKVLAIRQEELKVLKKSAYLSAVGTFTW 537
>AC003026-1|AAC05808.1| 691|Homo sapiens Multiple drug resistance
gene MRP1 (partial) protein.
Length = 691
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 173 FRDAFIKPAYDEQKLIKKFVIMSAIGAFVW 262
F+D + +E K++KK +SA+G F W
Sbjct: 9 FKDKVLAIRQEELKVLKKSAYLSAVGTFTW 38
>AB209120-1|BAD92357.1| 1439|Homo sapiens ATP-binding cassette,
sub-family C, member 1 isoform 1 variant protein.
Length = 1439
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 173 FRDAFIKPAYDEQKLIKKFVIMSAIGAFVW 262
F+D + +E K++KK +SA+G F W
Sbjct: 422 FKDKVLAIRQEELKVLKKSAYLSAVGTFTW 451
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,543,229
Number of Sequences: 237096
Number of extensions: 2082683
Number of successful extensions: 7211
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7211
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -