Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5638
         (711 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81134-5|CAB54316.1|  101|Caenorhabditis elegans Hypothetical pr...   100   1e-21
AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p4...    33   0.15 
Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical pr...    31   0.61 
Z11505-1|CAA77582.1|  460|Caenorhabditis elegans Hypothetical pr...    31   0.81 
Z92804-5|CAD89722.2|  320|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z92829-5|CAB07345.1|  324|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z99171-2|CAB16314.1|  710|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z92796-4|CAB63231.1|  516|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z75548-1|CAA99911.1|  776|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z81134-5|CAB54316.1|  101|Caenorhabditis elegans Hypothetical
           protein T28D6.9 protein.
          Length = 101

 Score =  100 bits (239), Expect = 1e-21
 Identities = 44/100 (44%), Positives = 59/100 (59%)
 Frame = +2

Query: 62  MDLSKLPNDMKLQLCKSYFKVGCLFLPFVWAVNVCWFFRDAFIKPAYDEQKLIKKFVIMS 241
           MD+SKL +  K+ LCK YF +G  FLP VW VN  WFF DAF KP    ++ I+K+VI S
Sbjct: 1   MDISKLTDVKKVDLCKKYFLIGACFLPLVWIVNTFWFFSDAFCKPINAHRRQIRKYVIAS 60

Query: 242 AIGAFVWAVILVTWITVYQTNRVSWGATGDALSFIVPLGR 361
            +G+  W ++L  W   +Q  R       D L+F+ P GR
Sbjct: 61  IVGSIFWIIVLSAWEIFFQHYRAQGLVWTDFLTFVFPTGR 100


>AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p450
           family protein 25A5 protein.
          Length = 477

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = +2

Query: 605 KDLFLQEFFSYFSDHLRNNIFLFNQLARQILRN 703
           K++F+Q F S FSD +  NIF  NQL + +L+N
Sbjct: 73  KEIFIQNF-SNFSDRMTPNIFGMNQLNQSLLQN 104


>Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical
           protein C36A4.6 protein.
          Length = 501

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = +2

Query: 605 KDLFLQEFFSYFSDHLRNNIFLFNQLARQILRN 703
           K++F+Q F S FSD +  +IF  NQL + +L+N
Sbjct: 97  KEIFIQNF-SNFSDRMTPDIFGMNQLNQSLLQN 128


>Z11505-1|CAA77582.1|  460|Caenorhabditis elegans Hypothetical
           protein F59B2.2 protein.
          Length = 460

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 80  PNDMKLQLCKSYFKVGCLFLPFVWAVNVCW 169
           P    L L KS F  GC  LP+ W +   W
Sbjct: 39  PTRAVLTLSKSMFNAGCFSLPYAWKLGGLW 68


>Z92804-5|CAD89722.2|  320|Caenorhabditis elegans Hypothetical
           protein K05D4.8 protein.
          Length = 320

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 200 YDEQKLIKKFVIMSAIGAFVWAVILVTWITVYQTNR 307
           Y E+    +F ++  I A V+ VI   +I VY+TNR
Sbjct: 18  YLEEAHNSEFALLGGICAIVFCVIFPFYIVVYRTNR 53


>Z92829-5|CAB07345.1|  324|Caenorhabditis elegans Hypothetical
           protein F10A3.5 protein.
          Length = 324

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = +1

Query: 268 YIGYVDYGVSNKQSVVGSYRRRTILHSTFRTSLEM*ISNMYFY**DFFILTCWTVF 435
           Y G+  Y   NK  VV S   R + +  FRT +   I    F    FF ++C  VF
Sbjct: 222 YFGFQTYNHLNKLEVVASVNFRELQNQLFRTLVVQTIFPTIFL---FFPVSCLVVF 274


>Z99171-2|CAB16314.1|  710|Caenorhabditis elegans Hypothetical
           protein F47G4.2 protein.
          Length = 710

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
 Frame = -1

Query: 273 NITAHTKAPIALIITNFFISFCSSYAGFMNASRKNQ-----HTFTAHTNGRNRQPTLKYD 109
           ++ A   +PI ++    F S  ++   ++N  R+N+          H   R  +  ++YD
Sbjct: 275 DVKAPKSSPIRILSCTTFDSSITALKYYLNLKRRNEVQICFQELRLHVK-RLHERKMQYD 333

Query: 108 LHNCSFISFGSLLKSIIN*LNQFDLID 28
           +  C  +S  SL K   + +  FD+++
Sbjct: 334 VTECVTLSLQSLEKLPCSLIMNFDIVE 360


>Z92796-4|CAB63231.1|  516|Caenorhabditis elegans Hypothetical
           protein H25K10.5 protein.
          Length = 516

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +3

Query: 486 LSYLRPDYTAIYVE--SWLENYVYWNGLS*CTFCSRAEKLNRKTFFCKNFS 632
           L  L PD+   + E   +LENYV ++ L     C   E      F   NF+
Sbjct: 310 LENLHPDFCITFREWRIFLENYVEFHNLKDAKLCQELESAQESDFVFCNFT 360


>Z75548-1|CAA99911.1|  776|Caenorhabditis elegans Hypothetical
           protein R90.1 protein.
          Length = 776

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +1

Query: 217 NKEICDNECNWSFRVGCYIGYVDYGVSNKQSVVGSYRRRTILHST 351
           NK + +NE +W       +GY +     KQ   G+   R   H+T
Sbjct: 281 NKIVAENEISWDEPYDWELGYDNMATRQKQQANGNLSARLKSHTT 325


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,141,859
Number of Sequences: 27780
Number of extensions: 347926
Number of successful extensions: 745
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)