Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5634
         (589 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49127-10|CAA88951.1|  400|Caenorhabditis elegans Hypothetical p...   219   2e-57
AL033535-3|CAA22133.1|  400|Caenorhabditis elegans Hypothetical ...   219   2e-57
Z96047-9|CAB09417.1|  372|Caenorhabditis elegans Hypothetical pr...   189   1e-48
Z81077-16|CAB03073.1|  372|Caenorhabditis elegans Hypothetical p...   189   1e-48
U40945-5|AAS80344.1|  617|Caenorhabditis elegans Hypothetical pr...    31   0.80 
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ...    27   9.9  

>Z49127-10|CAA88951.1|  400|Caenorhabditis elegans Hypothetical
           protein VF13D12L.3 protein.
          Length = 400

 Score =  219 bits (534), Expect = 2e-57
 Identities = 98/175 (56%), Positives = 127/175 (72%)
 Frame = +2

Query: 23  LLIHADTVGHYSHGLNRLEFYINDILSKATDPCAKPVILKESAATALVDGCDALGATVGN 202
           +L+  D  GHYSHGLNRL+ Y+ DI         +P+ILKE A TA VDG + LG  VGN
Sbjct: 78  VLLEGDIRGHYSHGLNRLDMYVRDIEQNVCKGDGEPIILKEKAGTAWVDGNNLLGPVVGN 137

Query: 203 FCMDVAIRKAQEAGVGWVAARRSNHYGMAGYWALKAEKQGLIGLSFTNSSPILVPTRSKT 382
           FCMD+AI KA+ AG+GWV A+ SNHYG+AG++AL+A K+G++G+S TN+SPI  PTRS  
Sbjct: 138 FCMDLAIEKAKNAGIGWVVAKGSNHYGIAGWYALRAMKKGMLGMSMTNTSPISFPTRSAV 197

Query: 383 SALGTNPIALAAPAKNGDNLVVDLATTAVAMGKVEIQVHKEEPLPAGWALGPDGK 547
            ALGTNPI+LAAP    D+ V+D+A+T VA+GKVE+   KE P+P  W +G  GK
Sbjct: 198 PALGTNPISLAAPGTGDDSFVLDMASTTVAIGKVELAARKENPVPLSWGVGEGGK 252


>AL033535-3|CAA22133.1|  400|Caenorhabditis elegans Hypothetical
           protein VF13D12L.3 protein.
          Length = 400

 Score =  219 bits (534), Expect = 2e-57
 Identities = 98/175 (56%), Positives = 127/175 (72%)
 Frame = +2

Query: 23  LLIHADTVGHYSHGLNRLEFYINDILSKATDPCAKPVILKESAATALVDGCDALGATVGN 202
           +L+  D  GHYSHGLNRL+ Y+ DI         +P+ILKE A TA VDG + LG  VGN
Sbjct: 78  VLLEGDIRGHYSHGLNRLDMYVRDIEQNVCKGDGEPIILKEKAGTAWVDGNNLLGPVVGN 137

Query: 203 FCMDVAIRKAQEAGVGWVAARRSNHYGMAGYWALKAEKQGLIGLSFTNSSPILVPTRSKT 382
           FCMD+AI KA+ AG+GWV A+ SNHYG+AG++AL+A K+G++G+S TN+SPI  PTRS  
Sbjct: 138 FCMDLAIEKAKNAGIGWVVAKGSNHYGIAGWYALRAMKKGMLGMSMTNTSPISFPTRSAV 197

Query: 383 SALGTNPIALAAPAKNGDNLVVDLATTAVAMGKVEIQVHKEEPLPAGWALGPDGK 547
            ALGTNPI+LAAP    D+ V+D+A+T VA+GKVE+   KE P+P  W +G  GK
Sbjct: 198 PALGTNPISLAAPGTGDDSFVLDMASTTVAIGKVELAARKENPVPLSWGVGEGGK 252


>Z96047-9|CAB09417.1|  372|Caenorhabditis elegans Hypothetical
           protein F36A2.3 protein.
          Length = 372

 Score =  189 bits (461), Expect = 1e-48
 Identities = 84/181 (46%), Positives = 122/181 (67%), Gaps = 1/181 (0%)
 Frame = +2

Query: 17  ADLLIHADTVGHYSHGLNRLEFYINDILSKATDPCAKPVILKESAATALVDGCDALGATV 196
           A+ L+ +D  GHYSHG+NRL  Y++D++ K+T     P +LK   +TA VDG + LG  V
Sbjct: 44  AETLLCSDYRGHYSHGINRLHIYVHDLMMKSTAVTGTPQVLKSKGSTAWVDGNNLLGPVV 103

Query: 197 GNFCMDVAIRKAQEAGVGWVAARRSNHYGMAGYWALKAEKQGLIGLSFTNSSPILVPTRS 376
           GNFCM +A+ KA+E G+GWV  R SNH+G+AG++A  A + GL+G++FTN+SP + PT S
Sbjct: 104 GNFCMQLAVEKAKEFGIGWVVCRNSNHFGIAGWYADFACRNGLVGMAFTNTSPCVFPTGS 163

Query: 377 KTSALGTNPIALAAPAKNGDNLVVDLATTAVAMGKVEIQVHKEEP-LPAGWALGPDGKNY 553
           +  +LG+NPI +AAP   GD+  +D+A+T VA GK+E+   K E  +P  W    +G   
Sbjct: 164 REKSLGSNPICMAAPGMEGDSFFLDMASTTVAYGKIEVVDRKGETYIPGSWGADKNGDET 223

Query: 554 H 556
           H
Sbjct: 224 H 224


>Z81077-16|CAB03073.1|  372|Caenorhabditis elegans Hypothetical
           protein F36A2.3 protein.
          Length = 372

 Score =  189 bits (461), Expect = 1e-48
 Identities = 84/181 (46%), Positives = 122/181 (67%), Gaps = 1/181 (0%)
 Frame = +2

Query: 17  ADLLIHADTVGHYSHGLNRLEFYINDILSKATDPCAKPVILKESAATALVDGCDALGATV 196
           A+ L+ +D  GHYSHG+NRL  Y++D++ K+T     P +LK   +TA VDG + LG  V
Sbjct: 44  AETLLCSDYRGHYSHGINRLHIYVHDLMMKSTAVTGTPQVLKSKGSTAWVDGNNLLGPVV 103

Query: 197 GNFCMDVAIRKAQEAGVGWVAARRSNHYGMAGYWALKAEKQGLIGLSFTNSSPILVPTRS 376
           GNFCM +A+ KA+E G+GWV  R SNH+G+AG++A  A + GL+G++FTN+SP + PT S
Sbjct: 104 GNFCMQLAVEKAKEFGIGWVVCRNSNHFGIAGWYADFACRNGLVGMAFTNTSPCVFPTGS 163

Query: 377 KTSALGTNPIALAAPAKNGDNLVVDLATTAVAMGKVEIQVHKEEP-LPAGWALGPDGKNY 553
           +  +LG+NPI +AAP   GD+  +D+A+T VA GK+E+   K E  +P  W    +G   
Sbjct: 164 REKSLGSNPICMAAPGMEGDSFFLDMASTTVAYGKIEVVDRKGETYIPGSWGADKNGDET 223

Query: 554 H 556
           H
Sbjct: 224 H 224


>U40945-5|AAS80344.1|  617|Caenorhabditis elegans Hypothetical
           protein F10D7.5a protein.
          Length = 617

 Score = 30.7 bits (66), Expect = 0.80
 Identities = 21/78 (26%), Positives = 32/78 (41%)
 Frame = -2

Query: 393 PNALVLDLVGTNIGEEFVNDSPMRPCFSAFNAQYPAIPXXXXXLAATHPTPASCAFLIAT 214
           P  L+LD+ G ++G E ++ S  RP     NA  P I       A    +PA  A  +  
Sbjct: 174 PMWLILDIYGNSVGVEIIDASEFRP---RRNAPPPPIIAVPPRPAPARTSPAITAIALTP 230

Query: 213 SIQKFPTVAPKASQPSTR 160
           S     ++A +      R
Sbjct: 231 SSASESSMASRTDDSGKR 248


>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
           protein 25, isoformb protein.
          Length = 1130

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = +2

Query: 239 AGVGWVAARRSNHYGMAGYWALKAEKQ-----GLIGLSFTNSSPILVPTRSKTSALGTNP 403
           AG   V +  SN  G+A  + ++  KQ     G   L  TN +P+L+PT    S + +  
Sbjct: 481 AGNDSVISGGSNSIGLANTYVMEPPKQAFDIRGNRVLPPTNKAPVLIPTNPAPSVISSTA 540

Query: 404 IA 409
            A
Sbjct: 541 SA 542


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,009,065
Number of Sequences: 27780
Number of extensions: 258348
Number of successful extensions: 725
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)