Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5631
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.17 
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    23   2.8  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    23   2.8  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   8.5  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 460  KPKEMEADGTKNHEGLSGTRPSAMKYAIEKREIIV 564
            KP+  EA+  K   G  GTRP   KY    R+ +V
Sbjct: 1015 KPQSQEANKPKPATGGKGTRPKRGKYRNYDRDSLV 1049


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -1

Query: 221 IASPLCLTYCSLTVPSVIVVVMRNK-GNDL 135
           I S LC+ YC+L     + ++   K G DL
Sbjct: 5   IVSLLCVIYCALVHADTVAILCSQKAGFDL 34


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -1

Query: 221 IASPLCLTYCSLTVPSVIVVVMRNK-GNDL 135
           I S LC+ YC+L     + ++   K G DL
Sbjct: 5   IVSLLCVIYCALVHADTVAILCSQKAGFDL 34


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 221 IASPLCLTYCSLTVPSVIVVVMR 153
           + S  CL+   LTV + +V+V R
Sbjct: 701 VPSKFCLSVTLLTVATSLVIVSR 723


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,903
Number of Sequences: 438
Number of extensions: 3835
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)