Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5628
         (567 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC052248-1|AAH52248.2|  541|Homo sapiens formiminotransferase cy...    32   1.2  
AF289024-1|AAG01855.1|  158|Homo sapiens formiminotransferase cy...    32   1.2  
AF289023-1|AAG01854.1|  495|Homo sapiens formiminotransferase cy...    32   1.2  
AF289022-1|AAG01853.1|  572|Homo sapiens formiminotransferase cy...    32   1.2  
AF289021-1|AAG01852.1|  541|Homo sapiens formiminotransferase cy...    32   1.2  
AF169017-1|AAF15558.1|  541|Homo sapiens formiminotransferase cy...    32   1.2  
BC046248-1|AAH46248.1|  503|Homo sapiens similar to CG32656-PA p...    30   6.5  
BC121019-1|AAI21020.1|  560|Homo sapiens leiomodin 3 (fetal) pro...    29   8.6  
AK057852-1|BAB71596.1|  348|Homo sapiens protein ( Homo sapiens ...    29   8.6  

>BC052248-1|AAH52248.2|  541|Homo sapiens formiminotransferase
           cyclodeaminase protein.
          Length = 541

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
 Frame = -2

Query: 338 SPGCCFEDASGGQGS--TIPTLASPSVCLVRVTATEYLFGSRVTCVIRH--AHPSMRAYF 171
           +PGC   D   G  +  T+ T   P  C+V          SR+  + RH   HP M A  
Sbjct: 30  TPGCVLLDVDAGPSTNRTVYTFVGPPECVVEGALNAARVASRLIDMSRHQGEHPRMGALD 89

Query: 170 VC 165
           VC
Sbjct: 90  VC 91


>AF289024-1|AAG01855.1|  158|Homo sapiens formiminotransferase
           cyclodeaminase form E protein.
          Length = 158

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
 Frame = -2

Query: 338 SPGCCFEDASGGQGS--TIPTLASPSVCLVRVTATEYLFGSRVTCVIRH--AHPSMRAYF 171
           +PGC   D   G  +  T+ T   P  C+V          SR+  + RH   HP M A  
Sbjct: 30  TPGCVLLDVDAGPSTNRTVYTFVGPPECVVEGALNAARVASRLIDMSRHQGEHPRMGALD 89

Query: 170 VC 165
           VC
Sbjct: 90  VC 91


>AF289023-1|AAG01854.1|  495|Homo sapiens formiminotransferase
           cyclodeaminase form D protein.
          Length = 495

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
 Frame = -2

Query: 338 SPGCCFEDASGGQGS--TIPTLASPSVCLVRVTATEYLFGSRVTCVIRH--AHPSMRAYF 171
           +PGC   D   G  +  T+ T   P  C+V          SR+  + RH   HP M A  
Sbjct: 30  TPGCVLLDVDAGPSTNRTVYTFVGPPECVVEGALNAARVASRLIDMSRHQGEHPRMGALD 89

Query: 170 VC 165
           VC
Sbjct: 90  VC 91


>AF289022-1|AAG01853.1|  572|Homo sapiens formiminotransferase
           cyclodeaminase form C protein.
          Length = 572

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
 Frame = -2

Query: 338 SPGCCFEDASGGQGS--TIPTLASPSVCLVRVTATEYLFGSRVTCVIRH--AHPSMRAYF 171
           +PGC   D   G  +  T+ T   P  C+V          SR+  + RH   HP M A  
Sbjct: 30  TPGCVLLDVDAGPSTNRTVYTFVGPPECVVEGALNAARVASRLIDMSRHQGEHPRMGALD 89

Query: 170 VC 165
           VC
Sbjct: 90  VC 91


>AF289021-1|AAG01852.1|  541|Homo sapiens formiminotransferase
           cyclodeaminase form B protein.
          Length = 541

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
 Frame = -2

Query: 338 SPGCCFEDASGGQGS--TIPTLASPSVCLVRVTATEYLFGSRVTCVIRH--AHPSMRAYF 171
           +PGC   D   G  +  T+ T   P  C+V          SR+  + RH   HP M A  
Sbjct: 30  TPGCVLLDVDAGPSTNRTVYTFVGPPECVVEGALNAARVASRLIDMSRHQGEHPRMGALD 89

Query: 170 VC 165
           VC
Sbjct: 90  VC 91


>AF169017-1|AAF15558.1|  541|Homo sapiens formiminotransferase
           cyclodeaminase protein.
          Length = 541

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
 Frame = -2

Query: 338 SPGCCFEDASGGQGS--TIPTLASPSVCLVRVTATEYLFGSRVTCVIRH--AHPSMRAYF 171
           +PGC   D   G  +  T+ T   P  C+V          SR+  + RH   HP M A  
Sbjct: 30  TPGCVLLDVDAGPSTNRTVYTFVGPPECVVEGALNAARVASRLIDMSRHQGEHPRMGALD 89

Query: 170 VC 165
           VC
Sbjct: 90  VC 91


>BC046248-1|AAH46248.1|  503|Homo sapiens similar to CG32656-PA
           protein.
          Length = 503

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 359 NPECGHPSPGCCFEDASGGQGSTIPTLASPSV 264
           NP CG  S    F+  SG     +P+ ASP V
Sbjct: 369 NPSCGTGSERLAFQSRSGSPDPEVPSRASPPV 400


>BC121019-1|AAI21020.1|  560|Homo sapiens leiomodin 3 (fetal)
           protein.
          Length = 560

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +3

Query: 36  LADEQDEEDTARRHEEAVEKLNSMIKLHSKLDSGICMPPEM 158
           L   QD++   R+ E+  ++L    KL + L++G+ +PP M
Sbjct: 390 LTRNQDKQRQKRQEEQKQQQLKEQKKLIAMLENGLGLPPGM 430


>AK057852-1|BAB71596.1|  348|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25123 fis, clone CBR06154. ).
          Length = 348

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +3

Query: 36  LADEQDEEDTARRHEEAVEKLNSMIKLHSKLDSGICMPPEM 158
           L   QD++   R+ E+  ++L    KL + L++G+ +PP M
Sbjct: 294 LTRNQDKQRQKRQEEQKQQQLKEQKKLIAMLENGLGLPPGM 334


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,552,862
Number of Sequences: 237096
Number of extensions: 1803563
Number of successful extensions: 3960
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3946
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)