Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5627
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 37 0.013
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 35 0.041
U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 31 0.66
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 31 0.66
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 31 0.66
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 31 0.66
Z81076-3|CAB03052.1| 394|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 0.88
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 0.88
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 0.88
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 0.88
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 0.88
AF003388-2|AAB54267.2| 167|Caenorhabditis elegans Hypothetical ... 30 1.5
AF000194-1|AAK39376.4| 386|Caenorhabditis elegans Hypothetical ... 30 1.5
U10438-14|ABB88242.1| 441|Caenorhabditis elegans Hypothetical p... 29 3.5
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 28 6.2
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z29116-2|CAA82368.3| 374|Caenorhabditis elegans Hypothetical pr... 28 6.2
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 28 6.2
U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 28 6.2
Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical p... 27 8.2
Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z81086-4|CAB03117.1| 342|Caenorhabditis elegans Hypothetical pr... 27 8.2
AL023844-11|CAA19525.3| 489|Caenorhabditis elegans Hypothetical... 27 8.2
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 36.7 bits (81), Expect = 0.013
Identities = 32/121 (26%), Positives = 44/121 (36%)
Frame = -1
Query: 451 NAVAPENPRTSPNSAPTSLKWTTESGNRPGRGPERNQLNLGTRNDRAANETADTLRAPTR 272
N E P ++ S T+L +TTE P + + T+ E+ T + T
Sbjct: 573 NPTTTEQPTSTAESTTTALPFTTEQ-TVTTEEPTTAEKSTATQKPTTTQESVSTEKTSTT 631
Query: 271 NKRRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAPSEQTGTATGLAETLH*ENTNAR 92
K T T + T+ E T G A P SE+T T T L T T
Sbjct: 632 KKAST---TEEPTTTDEPTTTTESSTTGKATTPELSTTSEET-TTTELKITTEGSTTTEE 687
Query: 91 P 89
P
Sbjct: 688 P 688
Score = 28.3 bits (60), Expect = 4.7
Identities = 33/122 (27%), Positives = 41/122 (33%), Gaps = 17/122 (13%)
Frame = -1
Query: 448 AVAPENPRTSPNSAPTSLKWTTESGNRPGRGPERNQLNLGTRNDRAANETADTLRAPTRN 269
A+ E P T+ S+ T TTE G P + A T L T
Sbjct: 538 AITTEEPTTTEESSTTEEVTTTEEPANTGNPPTTENPTTTEQPTSTAESTTTALPFTTEQ 597
Query: 268 KRRTE--------TGTRKLTSRLETVARRHRLTRGDAPA---------PTTGAPSEQTGT 140
TE T T+K T+ E+V+ T A PTT S TG
Sbjct: 598 TVTTEEPTTAEKSTATQKPTTTQESVSTEKTSTTKKASTTEEPTTTDEPTTTTESSTTGK 657
Query: 139 AT 134
AT
Sbjct: 658 AT 659
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 35.9 bits (79), Expect = 0.023
Identities = 21/52 (40%), Positives = 22/52 (42%)
Frame = -1
Query: 301 TADTLRAPTRNKRRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAPSEQT 146
T T PTR + R LTSR R TR APAP T PS T
Sbjct: 248 TTGTATRPTRPAVPAASAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRAT 299
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 35.9 bits (79), Expect = 0.023
Identities = 21/52 (40%), Positives = 22/52 (42%)
Frame = -1
Query: 301 TADTLRAPTRNKRRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAPSEQT 146
T T PTR + R LTSR R TR APAP T PS T
Sbjct: 248 TTGTATRPTRPAVPAASAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRAT 299
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 35.9 bits (79), Expect = 0.023
Identities = 21/52 (40%), Positives = 22/52 (42%)
Frame = -1
Query: 301 TADTLRAPTRNKRRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAPSEQT 146
T T PTR + R LTSR R TR APAP T PS T
Sbjct: 248 TTGTATRPTRPAVPAASAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRAT 299
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/90 (22%), Positives = 38/90 (42%)
Frame = -1
Query: 286 RAPTRNKRRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAPSEQTGTATGLAETLH*E 107
+ P ++ T T +++ E + + + T D P PT +PS T T+T + +
Sbjct: 57 KCPPKSPTTTSISTSTVSTTPERLTKPYEET--DTPIPTHSSPSTSTSTSTSTSTSTSTS 114
Query: 106 NTNARPDELTRQTTRSQDAKSPIQKKKKKT 17
+ + TR +T + +P K T
Sbjct: 115 RSTSTVTPTTRSSTTTTATSTPTSSSKATT 144
>U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical
protein B0507.6 protein.
Length = 857
Score = 31.5 bits (68), Expect = 0.50
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 7/146 (4%)
Frame = -1
Query: 445 VAPENPRTSPNSAPTSLKWTTESGNRPGRGPERNQLNLGTRNDRAANETADTLRAPTRNK 266
+ N + PN S T NRP R +Q +L + + A+T T ++
Sbjct: 133 IVSNNGKVFPNPISQSKNQGTMLKNRPPRLVRTHQSDLANIDTSHSRNPAETKNENTSSR 192
Query: 265 RRTETGTRK------LTSRLETVARRHRLTR-GDAPAPTTGAPSEQTGTATGLAETLH*E 107
+ T +RK + S T ++R + G A + T T A+ H E
Sbjct: 193 TNSATSSRKDYLNTSIPSANVTCTEKYRSSEFGSAKSSVPRVTCNSTKLET--AQATH-E 249
Query: 106 NTNARPDELTRQTTRSQDAKSPIQKK 29
N P + T+ T RS D+ +KK
Sbjct: 250 NIVLDPKKCTQNTLRS-DSYQDTEKK 274
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein
T06D8.1b protein.
Length = 3653
Score = 31.1 bits (67), Expect = 0.66
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Frame = -1
Query: 310 ANETADTLRAPTRNKRRTET--GTRKLTSRL--ETVARRHRLT--RGDAPAPTTGAPSEQ 149
A ++ +T TE+ G+ + T+ + ET H + DAPA TGAP++
Sbjct: 3029 AKDSGETAHVEDEQVSSTESSIGSEETTTTVNKETTEEHHEASGEEDDAPAFVTGAPTDS 3088
Query: 148 TGTAT-GLAETLH*ENTNARPDELTRQTTRSQDAKSPI 38
T A+ + E T+ DE T + + S I
Sbjct: 3089 TTEASVSTTSAITDETTSVAADESTSTSAGEVQSSSAI 3126
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 31.1 bits (67), Expect = 0.66
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Frame = -1
Query: 310 ANETADTLRAPTRNKRRTET--GTRKLTSRL--ETVARRHRLT--RGDAPAPTTGAPSEQ 149
A ++ +T TE+ G+ + T+ + ET H + DAPA TGAP++
Sbjct: 3029 AKDSGETAHVEDEQVSSTESSIGSEETTTTVNKETTEEHHEASGEEDDAPAFVTGAPTDS 3088
Query: 148 TGTAT-GLAETLH*ENTNARPDELTRQTTRSQDAKSPI 38
T A+ + E T+ DE T + + S I
Sbjct: 3089 TTEASVSTTSAITDETTSVAADESTSTSAGEVQSSSAI 3126
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 31.1 bits (67), Expect = 0.66
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Frame = -1
Query: 310 ANETADTLRAPTRNKRRTET--GTRKLTSRL--ETVARRHRLT--RGDAPAPTTGAPSEQ 149
A ++ +T TE+ G+ + T+ + ET H + DAPA TGAP++
Sbjct: 3029 AKDSGETAHVEDEQVSSTESSIGSEETTTTVNKETTEEHHEASGEEDDAPAFVTGAPTDS 3088
Query: 148 TGTAT-GLAETLH*ENTNARPDELTRQTTRSQDAKSPI 38
T A+ + E T+ DE T + + S I
Sbjct: 3089 TTEASVSTTSAITDETTSVAADESTSTSAGEVQSSSAI 3126
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 31.1 bits (67), Expect = 0.66
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Frame = -1
Query: 310 ANETADTLRAPTRNKRRTET--GTRKLTSRL--ETVARRHRLT--RGDAPAPTTGAPSEQ 149
A ++ +T TE+ G+ + T+ + ET H + DAPA TGAP++
Sbjct: 3029 AKDSGETAHVEDEQVSSTESSIGSEETTTTVNKETTEEHHEASGEEDDAPAFVTGAPTDS 3088
Query: 148 TGTAT-GLAETLH*ENTNARPDELTRQTTRSQDAKSPI 38
T A+ + E T+ DE T + + S I
Sbjct: 3089 TTEASVSTTSAITDETTSVAADESTSTSAGEVQSSSAI 3126
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 31.1 bits (67), Expect = 0.66
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Frame = -1
Query: 310 ANETADTLRAPTRNKRRTET--GTRKLTSRL--ETVARRHRLT--RGDAPAPTTGAPSEQ 149
A ++ +T TE+ G+ + T+ + ET H + DAPA TGAP++
Sbjct: 3029 AKDSGETAHVEDEQVSSTESSIGSEETTTTVNKETTEEHHEASGEEDDAPAFVTGAPTDS 3088
Query: 148 TGTAT-GLAETLH*ENTNARPDELTRQTTRSQDAKSPI 38
T A+ + E T+ DE T + + S I
Sbjct: 3089 TTEASVSTTSAITDETTSVAADESTSTSAGEVQSSSAI 3126
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 31.1 bits (67), Expect = 0.66
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Frame = -1
Query: 310 ANETADTLRAPTRNKRRTET--GTRKLTSRL--ETVARRHRLT--RGDAPAPTTGAPSEQ 149
A ++ +T TE+ G+ + T+ + ET H + DAPA TGAP++
Sbjct: 3029 AKDSGETAHVEDEQVSSTESSIGSEETTTTVNKETTEEHHEASGEEDDAPAFVTGAPTDS 3088
Query: 148 TGTAT-GLAETLH*ENTNARPDELTRQTTRSQDAKSPI 38
T A+ + E T+ DE T + + S I
Sbjct: 3089 TTEASVSTTSAITDETTSVAADESTSTSAGEVQSSSAI 3126
>Z81076-3|CAB03052.1| 394|Caenorhabditis elegans Hypothetical
protein F35C5.3 protein.
Length = 394
Score = 30.7 bits (66), Expect = 0.88
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = -1
Query: 310 ANETADTLRAPTRNKRRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAPSEQT---GT 140
A TADT PT K T ++ TS A H T G +G E T GT
Sbjct: 68 APTTADTTAEPT--KAHETTVAQEATSE---GAETHETTVGQDTTVRSGESQETTVSQGT 122
Query: 139 ATGLAETLH*ENTNARPDELTRQTTRSQD 53
T+ E T ++ ++++TT SQD
Sbjct: 123 TVSQENTVSQETTVSQDTTVSQETTVSQD 151
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.7 bits (66), Expect = 0.88
Identities = 30/137 (21%), Positives = 42/137 (30%)
Frame = -1
Query: 454 SNAVAPENPRTSPNSAPTSLKWTTESGNRPGRGPERNQLNLGTRNDRAANETADTLRAPT 275
+ P T+P + T+ TT + P + T T T PT
Sbjct: 177 TTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTT-TVPTTTTTTPTTTTTTTTTPT 235
Query: 274 RNKRRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAPSEQTGTATGLAETLH*ENTNA 95
T T T+ ET T PTT + T T T T A
Sbjct: 236 TTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTT--TTTTA 293
Query: 94 RPDELTRQTTRSQDAKS 44
+ + T TT++ S
Sbjct: 294 KTTKSTTTTTKTTKTTS 310
Score = 28.7 bits (61), Expect = 3.5
Identities = 29/122 (23%), Positives = 35/122 (28%)
Frame = -1
Query: 430 PRTSPNSAPTSLKWTTESGNRPGRGPERNQLNLGTRNDRAANETADTLRAPTRNKRRTET 251
P T + PT+ TT + E T + T T PT T
Sbjct: 112 PTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTT-TPTTTTTTPTT 170
Query: 250 GTRKLTSRLETVARRHRLTRGDAPAPTTGAPSEQTGTATGLAETLH*ENTNARPDELTRQ 71
T T+ T APTT + T T T T T P T
Sbjct: 171 TTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTT 230
Query: 70 TT 65
TT
Sbjct: 231 TT 232
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.7 bits (66), Expect = 0.88
Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 1/143 (0%)
Frame = -1
Query: 442 APENPRTSPN-SAPTSLKWTTESGNRPGRGPERNQLNLGTRNDRAANETADTLRAPTRNK 266
+P SP SA +K T+ P + E + + D +++PT+ +
Sbjct: 1736 SPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKE 1795
Query: 265 RRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAPSEQTGTATGLAETLH*ENTNARPD 86
+ E K S + + + +PT S + T E+ E + +P+
Sbjct: 1796 KSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESK--EKSPEKPE 1853
Query: 85 ELTRQTTRSQDAKSPIQKKKKKT 17
E + T + +KKK K+
Sbjct: 1854 EKPKSPTPKKSPPGSPKKKKSKS 1876
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.7 bits (66), Expect = 0.88
Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 1/143 (0%)
Frame = -1
Query: 442 APENPRTSPN-SAPTSLKWTTESGNRPGRGPERNQLNLGTRNDRAANETADTLRAPTRNK 266
+P SP SA +K T+ P + E + + D +++PT+ +
Sbjct: 1736 SPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKE 1795
Query: 265 RRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAPSEQTGTATGLAETLH*ENTNARPD 86
+ E K S + + + +PT S + T E+ E + +P+
Sbjct: 1796 KSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESK--EKSPEKPE 1853
Query: 85 ELTRQTTRSQDAKSPIQKKKKKT 17
E + T + +KKK K+
Sbjct: 1854 EKPKSPTPKKSPPGSPKKKKSKS 1876
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.7 bits (66), Expect = 0.88
Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 1/143 (0%)
Frame = -1
Query: 442 APENPRTSPN-SAPTSLKWTTESGNRPGRGPERNQLNLGTRNDRAANETADTLRAPTRNK 266
+P SP SA +K T+ P + E + + D +++PT+ +
Sbjct: 1736 SPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKE 1795
Query: 265 RRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAPSEQTGTATGLAETLH*ENTNARPD 86
+ E K S + + + +PT S + T E+ E + +P+
Sbjct: 1796 KSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESK--EKSPEKPE 1853
Query: 85 ELTRQTTRSQDAKSPIQKKKKKT 17
E + T + +KKK K+
Sbjct: 1854 EKPKSPTPKKSPPGSPKKKKSKS 1876
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.7 bits (66), Expect = 0.88
Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 1/143 (0%)
Frame = -1
Query: 442 APENPRTSPN-SAPTSLKWTTESGNRPGRGPERNQLNLGTRNDRAANETADTLRAPTRNK 266
+P SP SA +K T+ P + E + + D +++PT+ +
Sbjct: 1736 SPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKE 1795
Query: 265 RRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAPSEQTGTATGLAETLH*ENTNARPD 86
+ E K S + + + +PT S + T E+ E + +P+
Sbjct: 1796 KSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESK--EKSPEKPE 1853
Query: 85 ELTRQTTRSQDAKSPIQKKKKKT 17
E + T + +KKK K+
Sbjct: 1854 EKPKSPTPKKSPPGSPKKKKSKS 1876
>AF003388-2|AAB54267.2| 167|Caenorhabditis elegans Hypothetical
protein R10F2.4 protein.
Length = 167
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = -1
Query: 421 SPNSAPTSLKWTTESGNRPGRGPERNQLNLGTRNDRAANETADTLRAPTRNKRRTETGT 245
S S+ T+ K T SG+RPG GT A A RA + KR TE T
Sbjct: 113 SAGSSTTTTKPRTRSGSRPGTSSRP-----GTNASERATSAAGPKRAASAKKRTTEKKT 166
>AF000194-1|AAK39376.4| 386|Caenorhabditis elegans Hypothetical
protein ZC328.2 protein.
Length = 386
Score = 29.9 bits (64), Expect = 1.5
Identities = 38/131 (29%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Frame = -1
Query: 424 TSPNSAPTSLKWTTESGNRPGRGPERNQLNLGTRNDRAANETADTLRAPTRN-KRRTETG 248
+S NS P T S PG P LN+ ++++A E +R G
Sbjct: 154 SSTNSTPA-----TASTGPPGLSPGGAALNI--EHEKSAFEIVSCHHQSAEEILQRVRLG 206
Query: 247 TRKLTSRLETVARRHRLTRGDAPAPTTGAPSEQTGTATGLAETLH----*ENTNARPDEL 80
T TS A R + +A TTG+ +GTA G A + E RPD L
Sbjct: 207 TSGSTSS----ANNLRNSLSEATTTTTGSVESTSGTADGSAPGQYYCFICEKDFRRPDIL 262
Query: 79 TRQTTRSQDAK 47
+R T R K
Sbjct: 263 SRHTRRHTGEK 273
>U10438-14|ABB88242.1| 441|Caenorhabditis elegans Hypothetical
protein B0280.11 protein.
Length = 441
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -1
Query: 412 SAPTSLKWTTESGNRPGRGPERNQLNLGTRNDRAANETADTLRAPTRNKRRTETGTRKLT 233
SAPTS + T+E R R P ++++ G + A T NK +T+T ++T
Sbjct: 26 SAPTSKERTSEISKRKSRSPSKSKVTTGNSHG-----------ASTDNKTKTDTNRMEVT 74
Query: 232 SR 227
++
Sbjct: 75 AK 76
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = -3
Query: 284 GSDAEQ--APHRNRDAKTNKS-LRDSSASPPPDKRRRTSPDHXXXXXXXXXXXXXXXXTP 114
GSD+E P + + K NK ++SS + S + P
Sbjct: 88 GSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEESEGDVSEEDVKPQIHSDDELEEEDEAP 147
Query: 113 LREHKRETRRTNSPDYQKPRREEPHSKKKKK 21
+ + E +R +K +RE+ K+KK+
Sbjct: 148 TTDDEEEQKRKEKERRKKEKREKKERKEKKR 178
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/81 (19%), Positives = 30/81 (37%)
Frame = -3
Query: 254 NRDAKTNKSLRDSSASPPPDKRRRTSPDHXXXXXXXXXXXXXXXXTPLREHKRETRRTNS 75
N + + DS SPP R+R D+ +P R + ++ +
Sbjct: 102 NSPPRGKRQRHDSDNSPPRPSRKRNDSDNSPPRPSRNRHDSDKDNSPPRRRRHDSDNSPP 161
Query: 74 PDYQKPRREEPHSKKKKKNSR 12
+K R E P ++ ++ R
Sbjct: 162 RPSRKIREESPSARNRRSPPR 182
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 6.2
Identities = 24/92 (26%), Positives = 31/92 (33%)
Frame = -3
Query: 287 SGSDAEQAPHRNRDAKTNKSLRDSSASPPPDKRRRTSPDHXXXXXXXXXXXXXXXXTPLR 108
S S + AP R R ++S PP RRR SP P
Sbjct: 380 SASKSPPAPRRRRSPSKSRSPAPKREIPP--ARRRRSPSASKSPPAPKRAKSRSKSPPAP 437
Query: 107 EHKRETRRTNSPDYQKPRREEPHSKKKKKNSR 12
+R ++ SP PRR SK + R
Sbjct: 438 RRRRSPSQSKSP---APRRRRSPSKSPQAPRR 466
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -1
Query: 286 RAPTRNKRRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAP 158
R T+N R + + +R E ARR R P PT G P
Sbjct: 53 RLETQNDRLKRQQSAEERARAEADARRRERCRNRRPQPTPGPP 95
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -1
Query: 286 RAPTRNKRRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAP 158
R T+N R + + +R E ARR R P PT G P
Sbjct: 53 RLETQNDRLKRQQSAEERARAEADARRRERCRNRRPQPTPGPP 95
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -1
Query: 286 RAPTRNKRRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAP 158
R T+N R + + +R E ARR R P PT G P
Sbjct: 53 RLETQNDRLKRQQSAEERARAEADARRRERCRNRRPQPTPGPP 95
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/87 (24%), Positives = 36/87 (41%)
Frame = -3
Query: 278 DAEQAPHRNRDAKTNKSLRDSSASPPPDKRRRTSPDHXXXXXXXXXXXXXXXXTPLREHK 99
D ++ R+RD K RD+ D++R S D ++ K
Sbjct: 319 DRDRKRSRSRDRKRRSRSRDNKDR---DRKRSRSRDRRRRSKSRDRKRERSRSRS-KDRK 374
Query: 98 RETRRTNSPDYQKPRREEPHSKKKKKN 18
R+ +R+ S +K R +E +KK+N
Sbjct: 375 RDKKRSRSRSPEKRRDKEDRKTEKKEN 401
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 27.9 bits (59), Expect = 6.2
Identities = 28/112 (25%), Positives = 42/112 (37%)
Frame = -1
Query: 361 RGPERNQLNLGTRNDRAANETADTLRAPTRNKRRTETGTRKLTSRLETVARRHRLTRGDA 182
R P RN + + AAN++ P+R+ R TR + R +TVA +
Sbjct: 1442 RPPSRNTRSASAQKTVAANKSVLESEIPSRSASRR---TRSTSLRNDTVAEPDETSVAMT 1498
Query: 181 PAPTTGAPSEQTGTATGLAETLH*ENTNARPDELTRQTTRSQDAKSPIQKKK 26
T A SE + + T P + +T S A S + KK
Sbjct: 1499 TRRRTRATSEVVSKQSSEDDGRSTPKTGRTPTKKAAASTSSSRAGSVTRGKK 1550
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/87 (24%), Positives = 36/87 (41%)
Frame = -3
Query: 278 DAEQAPHRNRDAKTNKSLRDSSASPPPDKRRRTSPDHXXXXXXXXXXXXXXXXTPLREHK 99
D ++ R+RD K RD+ D++R S D ++ K
Sbjct: 319 DRDRKRSRSRDRKRRSRSRDNKDR---DRKRSRSRDRRRRSKSRDRKRERSRSRS-KDRK 374
Query: 98 RETRRTNSPDYQKPRREEPHSKKKKKN 18
R+ +R+ S +K R +E +KK+N
Sbjct: 375 RDKKRSRSRSPEKRRDKEDRKTEKKEN 401
>Z29116-2|CAA82368.3| 374|Caenorhabditis elegans Hypothetical
protein ZK507.3 protein.
Length = 374
Score = 27.9 bits (59), Expect = 6.2
Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Frame = -1
Query: 241 KLTSRLETVARRHRLTRGDAPAPTTGA----PSEQTGTATGLAETLH*ENTNARPDELTR 74
KLT + V + R PTT A PS TGT TG + N + + R
Sbjct: 288 KLTLKEPLVWFKERNDNESGSTPTTSATACSPSSSTGTGTGTGVSKIASNIDQKSIASDR 347
Query: 73 QTTRSQDAKSPIQKKKKKTRD 11
S D K KTR+
Sbjct: 348 NEENSLDGSKTGTWKSTKTRN 368
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = -3
Query: 284 GSDAEQ--APHRNRDAKTNKS-LRDSSASPPPDKRRRTSPDHXXXXXXXXXXXXXXXXTP 114
GSD+E P + + K NK ++SS + S + P
Sbjct: 88 GSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEESEGDVSEEDVKPQIHSDDELEEEDEAP 147
Query: 113 LREHKRETRRTNSPDYQKPRREEPHSKKKKK 21
+ + E +R +K +RE+ K+KK+
Sbjct: 148 TTDDEEEQKRKEKERRKKEKREKKKRKEKKR 178
>U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical
protein K10B2.5 protein.
Length = 1009
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 183 ASPLVRRWRRATVSKRLVSFRVPVSVRR 266
ASP+ RR RR T + L SF P SVR+
Sbjct: 280 ASPMSRRNRRGTQTIVLPSFDSPASVRK 307
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 27.9 bits (59), Expect = 6.2
Identities = 33/121 (27%), Positives = 50/121 (41%)
Frame = -1
Query: 451 NAVAPENPRTSPNSAPTSLKWTTESGNRPGRGPERNQLNLGTRNDRAANETADTLRAPTR 272
+ +AP P ++P AP+ L T+ S P P + L N A E +R
Sbjct: 303 STIAPAAP-SAPAPAPSQLNPTSTSPTMPAIAPSSSALK---SNFAALQEKM------SR 352
Query: 271 NKRRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAPSEQTGTATGLAETLH*ENTNAR 92
N + K+ S ++ +R R + G++ TTG PS +AE H AR
Sbjct: 353 NLK--VVAPEKVAS-IQKPDQRDRSSTGES---TTGEPSIDNSATDQVAELQHITKNRAR 406
Query: 91 P 89
P
Sbjct: 407 P 407
>Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical
protein M01E5.6 protein.
Length = 702
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -1
Query: 283 APTRNKRRTETGTR--KLTSRLETVARRHRLTRGDAPAPTTGAPSEQTGTATGLAETLH* 110
A + K+R E +R K+ ++++ + +R G ++ PSE+ A
Sbjct: 509 AMDKKKKRRELKSRLNKINAQIDELEKRRMERAGKKQVVSSSVPSEEAAQVEAPASPALA 568
Query: 109 ENTNARPDELT 77
ENTN +E T
Sbjct: 569 ENTNQISNEET 579
>Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical
protein M01E5.6 protein.
Length = 702
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -1
Query: 283 APTRNKRRTETGTR--KLTSRLETVARRHRLTRGDAPAPTTGAPSEQTGTATGLAETLH* 110
A + K+R E +R K+ ++++ + +R G ++ PSE+ A
Sbjct: 509 AMDKKKKRRELKSRLNKINAQIDELEKRRMERAGKKQVVSSSVPSEEAAQVEAPASPALA 568
Query: 109 ENTNARPDELT 77
ENTN +E T
Sbjct: 569 ENTNQISNEET 579
>Z81086-4|CAB03117.1| 342|Caenorhabditis elegans Hypothetical
protein F53B6.4 protein.
Length = 342
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/100 (18%), Positives = 48/100 (48%)
Frame = -1
Query: 316 RAANETADTLRAPTRNKRRTETGTRKLTSRLETVARRHRLTRGDAPAPTTGAPSEQTGTA 137
R +++ + R+ +K+ T + K +S+ + + ++ A T+G+ A
Sbjct: 101 RRSSKAKHSKRSSKSSKKGTSGKSGKGSSKRGGKSSKSSKSKKVKTATTSGSQVSTVSAA 160
Query: 136 TGLAETLH*ENTNARPDELTRQTTRSQDAKSPIQKKKKKT 17
TG+++ + ++R + ++ +++ S QKK +K+
Sbjct: 161 TGVSDKQSNSSKSSRKSSKSSKSRKNRRLDSDAQKKMEKS 200
>AL023844-11|CAA19525.3| 489|Caenorhabditis elegans Hypothetical
protein Y48A6B.10 protein.
Length = 489
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 582 RSRRIKIAIDRSRRGGNVRLRTDEATDPA-QEGRRPGRQELQARPTQSLQRILARA 418
+ I + +RR N ++R +A A QE R+ + QA Q +RILA +
Sbjct: 366 KENEISVEEREARRAKNRKIREKKARKKAAQEARQAAEEARQAEHLQREERILANS 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,606,319
Number of Sequences: 27780
Number of extensions: 216475
Number of successful extensions: 1391
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -