BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5627
(622 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 28 0.084
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 1.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 1.8
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.4
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 3.2
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 23 3.2
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 23 3.2
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 23 3.2
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 21 7.3
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 9.7
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 9.7
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 9.7
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 9.7
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 9.7
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 9.7
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 9.7
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 9.7
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 9.7
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 9.7
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 9.7
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 27.9 bits (59), Expect = 0.084
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 192 EATHQPRPQEHRANRQGQQQDSQRHSTKRTQTRDQTN 82
+A QP+ Q+ + +Q QQQ Q+ ++ Q TN
Sbjct: 825 QAQAQPQQQQQQQQQQPQQQQQQQQQQQQQQRGPMTN 861
Score = 25.8 bits (54), Expect = 0.34
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 219 Q*RVATA*QEATHQPRPQEHRANRQGQQQDSQRHSTKRTQ 100
Q R A Q+ Q + Q+ + +Q QQQ Q+H + +
Sbjct: 1201 QQRNAAMVQQQQQQQQQQQQQQQQQQQQQQQQQHQARERE 1240
Score = 23.8 bits (49), Expect = 1.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 195 QEATHQPRPQEHRANRQGQQQDSQR 121
Q+ + QP+ Q+ + +Q QQQ Q+
Sbjct: 1518 QQQSQQPQQQQPQPQQQQQQQQQQQ 1542
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 195 QEATHQPRPQEHRANRQGQQQDSQR 121
Q QP+PQ+ + +Q QQ Q+
Sbjct: 1523 QPQQQQPQPQQQQQQQQQQQPQQQQ 1547
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 189 ATHQPRPQEHRANRQGQQQDSQRH 118
A QP+ Q+ + +Q QQQ H
Sbjct: 1446 APQQPQQQQQQQQQQQQQQQQLNH 1469
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 168 QEHRANRQGQQQDSQRHSTKRTQTR 94
Q+H Q QQQ QR ++ + R
Sbjct: 157 QDHHRPYQQQQQQQQRQQQRQEERR 181
Score = 21.8 bits (44), Expect = 5.5
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -2
Query: 183 HQPRPQEHRANRQGQQQDSQRHSTKRTQTRDQ 88
HQ + +A Q QQQ Q+ + Q + Q
Sbjct: 817 HQSTHPQAQAQAQPQQQQQQQQQQPQQQQQQQ 848
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 195 QEATHQPRPQEHRANRQGQQQDSQ 124
Q+ Q +PQ+ + +Q QQQ +
Sbjct: 833 QQQQQQQQPQQQQQQQQQQQQQQR 856
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = -2
Query: 192 EATHQPRPQEHRANRQGQQQDSQRHSTKRTQTRDQ 88
++TH + + +Q QQQ Q ++ Q + Q
Sbjct: 818 QSTHPQAQAQAQPQQQQQQQQQQPQQQQQQQQQQQ 852
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -2
Query: 195 QEATHQPRPQEHRANRQGQQQDSQRHSTKRTQ 100
Q +PQ+ + Q QQQ Q+ ++ Q
Sbjct: 1516 QPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQ 1547
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.8 bits (49), Expect = 1.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 195 QEATHQPRPQEHRANRQGQQQDSQRH 118
Q+ Q + Q+ + +Q QQQ Q+H
Sbjct: 438 QQPQQQQQQQQQQQQQQQQQQQQQQH 463
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = -2
Query: 195 QEATHQPRPQEHRANRQGQQQDSQRHSTKR 106
Q + +PQ+ + +Q QQQ Q+ ++
Sbjct: 432 QHVINAQQPQQQQQQQQQQQQQQQQQQQQQ 461
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -1
Query: 424 TSPNSAPTSLKWTTESGNRPGRGPERNQLNLG--TRNDR 314
T P + P + W + PG G + L L R DR
Sbjct: 356 THPQAGPHFITWYKDGRQLPGTGRQSELLRLNGINREDR 394
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -1
Query: 424 TSPNSAPTSLKWTTESGNRPGRGPERNQLNLG--TRNDR 314
T P + P + W + PG G + L L R DR
Sbjct: 356 THPQAGPHFITWYKDGRQLPGTGRQSELLRLNGINREDR 394
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 1.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 497 AGSVASSVLSRTFPPRLDRS 556
A S S LS T PP +DRS
Sbjct: 45 ASSSNSDSLSMTIPPSIDRS 64
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 412 SAPTSLKWTTESGN 371
SA TS KW +E GN
Sbjct: 26 SAGTSCKWLSEGGN 39
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 22.6 bits (46), Expect = 3.2
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -2
Query: 180 QPRPQEHRANRQGQQQDSQRHSTKRTQTRDQTN*LARLPEAK 55
QPRP R R+ + + Q R L R PEA+
Sbjct: 108 QPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAE 149
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = -1
Query: 88 DELTRQTTRSQDAKS 44
DE+ ++TTR QD++S
Sbjct: 128 DEIKKKTTRFQDSRS 142
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = -1
Query: 88 DELTRQTTRSQDAKS 44
DE+ ++TTR QD++S
Sbjct: 128 DEIKKKTTRFQDSRS 142
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = -1
Query: 88 DELTRQTTRSQDAKS 44
DE+ ++TTR QD++S
Sbjct: 128 DEIKKKTTRFQDSRS 142
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 62 KPRREEPHSKKKKKN 18
K + E H KKKKN
Sbjct: 202 KSKASEEHGNKKKKN 216
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3
Query: 224 RDSSASPPPDKRR 186
R + SPPP KRR
Sbjct: 898 RGTVVSPPPTKRR 910
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3
Query: 224 RDSSASPPPDKRR 186
R + SPPP KRR
Sbjct: 936 RGTVVSPPPTKRR 948
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 71 DYQKPRREEPHSKKKKKNS 15
++Q+ RR EP ++KN+
Sbjct: 328 NFQEERRSEPVEPPRRKNN 346
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 576 DFFTGETSPGGRLNA 620
DFF+G +PG L++
Sbjct: 528 DFFSGSCAPGAPLDS 542
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 576 DFFTGETSPGGRLNA 620
DFF+G +PG L++
Sbjct: 528 DFFSGSCAPGAPLDS 542
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 576 DFFTGETSPGGRLNA 620
DFF+G +PG L++
Sbjct: 528 DFFSGSCAPGAPLDS 542
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.0 bits (42), Expect = 9.7
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 254 NRDAKTNKSLRDSSASPPPDKRRRTSP 174
N D+ +SSAS PD R SP
Sbjct: 25 NNDSSGIPHSAESSASNSPDHYERFSP 51
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 449 VGRA*SSCRPGRRPSCAGSVASSVLS 526
+ R S+ RP RR SC + +S
Sbjct: 395 INRVGSTRRPSRRNSCESQMMGDEMS 420
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.0 bits (42), Expect = 9.7
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 406 PTSLKWTTESGNRPGRGPERNQLNLGTRNDRAANETADTLR 284
P W TE RP ER + R AA A T R
Sbjct: 576 PPRALWPTEWKVRPSTVEEREEFRRQERMRYAAPHKAFTYR 616
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 86 RTNSPDYQKPRREEPHSKKKKKNS 15
R+ SP + + H+K+K KN+
Sbjct: 42 RSPSPSLLTSQPHQDHNKEKSKNN 65
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.0 bits (42), Expect = 9.7
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 352 ERNQLNLGTRNDRAANETADTLRAPTRNKRRTETGT 245
ER L G + ++ + LRA N+RR GT
Sbjct: 487 ERPNLLEGWKVEKIQEIYLEALRAYVDNRRRPNPGT 522
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,304
Number of Sequences: 438
Number of extensions: 2834
Number of successful extensions: 35
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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