Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5621
(626 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 54 1e-09
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 54 1e-09
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 29 0.037
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 1.8
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 23 2.4
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 2.4
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 3.2
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 4.3
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 4.3
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 4.3
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 9.8
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 9.8
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 9.8
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 9.8
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 54.0 bits (124), Expect = 1e-09
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +1
Query: 316 GKCPQNEEYKFCEP-CNRTCEN--PFPVCPAQCARGCFCKDGLVRDKDGKCVELEQC 477
GKCP NE + C+ C R C N P P+C CA GC C+ G +R+K CV +C
Sbjct: 35 GKCPSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91
Score = 44.0 bits (99), Expect = 1e-06
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +1
Query: 109 CRANERFLECG--CRKTCRN--PAPNCRAMCITGCFCEEGQVNNDNGVCVNLADC 261
C +NE F C C++ C N P P C +C GC C G + N VCV + C
Sbjct: 37 CPSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 54.0 bits (124), Expect = 1e-09
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +1
Query: 316 GKCPQNEEYKFCEP-CNRTCEN--PFPVCPAQCARGCFCKDGLVRDKDGKCVELEQC 477
GKCP NE + C+ C R C N P P+C CA GC C+ G +R+K CV +C
Sbjct: 35 GKCPSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91
Score = 44.0 bits (99), Expect = 1e-06
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +1
Query: 109 CRANERFLECG--CRKTCRN--PAPNCRAMCITGCFCEEGQVNNDNGVCVNLADC 261
C +NE F C C++ C N P P C +C GC C G + N VCV + C
Sbjct: 37 CPSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 29.1 bits (62), Expect = 0.037
Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Frame = +1
Query: 106 LCRANER-FLECGCRKTCRNPAPNCRAMCITGCFCEEGQVNNDNGVCVNLADCPQAASAY 282
LCR F C C C A +C C GC C + N N V + +
Sbjct: 736 LCRYEAHCFALCHC---CDFDACDCEMTCPAGCKCYNDRTWNTNAVDCSGLGVEEIPRRI 792
Query: 283 KLQTTEPRFDGGKCPQNEEYKF 348
+ TE DG + + + F
Sbjct: 793 PMDATEVYLDGNVLRELQNHVF 814
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.4 bits (48), Expect = 1.8
Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 1/99 (1%)
Frame = +2
Query: 266 KPLPHTSCRQQSHASMEGNALKTRSTNSASPVTGLARIRSRC-VQRSAPEDVSVKTVW*G 442
K L + R++ S E ++ NS ++ RSR +R ++ + +
Sbjct: 266 KLLEERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDKTERERSKERKIISSLSN 325
Query: 443 TKTENVWNWNNAQT*NILSLEKTTNSQSLPASTAVPIKC 559
N+ N+NN N + +P VPI C
Sbjct: 326 NYISNISNYNNNNNYNKKLYYNINYIEQIPVPVPVPIYC 364
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -1
Query: 407 AHCAGHTGNGFSQVLLQGSQNLYSSF*GHFPPSKRGSV 294
A+CA HT + + ++ LY++F P K +V
Sbjct: 422 AYCAAHTDSSGAMKIVNMLNQLYTAFDVLTDPKKNPNV 459
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.0 bits (47), Expect = 2.4
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +1
Query: 439 RDKDGKCVELEQCSNLKHLKLGENYKQPIPSRVNCGPYQVYKKCGTCDKTCSNPNPVCNQ 618
++K C++ E+ K K ++ K R++ Y+ KC C SN VC +
Sbjct: 111 KEKSNVCLKFEEQKRRK--KSLDDVKILRNDRIDS--YKSNLKCDKCSTYQSNGEEVCLE 166
Query: 619 TC 624
C
Sbjct: 167 NC 168
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = +1
Query: 16 QYSCIMSSKSIFICLSLCYIV 78
+++ ++ S F+C+SL YI+
Sbjct: 391 RHTSVLIGWSAFLCISLVYII 411
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.2 bits (45), Expect = 4.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 376 SRKSCYRARRICTPRFEGIS 317
SRK R RR TPR+ +S
Sbjct: 402 SRKESGRRRRRRTPRYNSVS 421
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -1
Query: 407 AHCAGHTGNGFSQVLLQGSQNLYSSF*GHFPPSKRGSV 294
A+CA HT + + ++ LY++F P K +V
Sbjct: 422 AYCAAHTDSSGAVKIVNMLNQLYTAFDVLTDPKKNPNV 459
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 442 DKDGKCVELEQC 477
D DGK V+L QC
Sbjct: 13 DNDGKMVDLTQC 24
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.0 bits (42), Expect = 9.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 500 LEKTTNSQSLPASTAVPIKCTRSVAPVT 583
LEK + LP + VPI T V VT
Sbjct: 19 LEKVRGPKYLPLTLIVPITLTYVVIFVT 46
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/35 (28%), Positives = 14/35 (40%)
Frame = +2
Query: 455 NVWNWNNAQT*NILSLEKTTNSQSLPASTAVPIKC 559
N+ N+NN N + +P VPI C
Sbjct: 92 NISNYNNNNNYNKKLYYNINYIEQIPVPVPVPIYC 126
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/35 (28%), Positives = 14/35 (40%)
Frame = +2
Query: 455 NVWNWNNAQT*NILSLEKTTNSQSLPASTAVPIKC 559
N+ N+NN N + +P VPI C
Sbjct: 92 NISNYNNDNNYNKKLYYNINYIEQIPVPVPVPIYC 126
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +1
Query: 472 QCSNLKHLKLGENYKQPIPSRVN 540
+CSNL H+ E Y+ +N
Sbjct: 445 RCSNLNHMMREEFYQSQYGDPIN 467
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,549
Number of Sequences: 438
Number of extensions: 4799
Number of successful extensions: 44
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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