Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5614
(414 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.38
SPCC70.09c |mug9||conserved fungal protein|Schizosaccharomyces p... 25 3.5
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 25 6.1
SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces po... 25 6.1
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 24 8.1
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.7 bits (61), Expect = 0.38
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 3072 ITSSTALNTSTPITSSSVLNSSTAITSSSIVNSST 3106
Score = 28.7 bits (61), Expect = 0.38
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGF---PRPSTSRSTLWEAYP 342
++S+TAL+ P+ S+V+ SST + S+ P TS S L + P
Sbjct: 3324 ITSSTALNTSTPITSSSVLNSSTAITSSSILNSSTPVTSSSVLNSSTP 3371
Score = 28.3 bits (60), Expect = 0.50
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPSTS 315
++S+TAL+ +P+ S+V+ SST + S+ STS
Sbjct: 1272 ITSSTALNTSIPITSSSVLNSSTPITSSTALNTSTS 1307
Score = 27.9 bits (59), Expect = 0.66
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASN---GFPRPSTSRSTLWEAYP 342
++S+TAL+ P+ S+V+ SST + S+ P TS S L + P
Sbjct: 684 ITSSTALNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTP 731
Score = 27.9 bits (59), Expect = 0.66
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGF---PRPSTSRSTLWEAYP 342
++S+TAL+ P+ S+V+ SST + S+ P TS S L + P
Sbjct: 732 ITSSTALNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTP 779
Score = 27.5 bits (58), Expect = 0.87
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPSTS 315
++S+TAL+ P+ S+V+ SST + S+ STS
Sbjct: 504 ITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTS 539
Score = 27.5 bits (58), Expect = 0.87
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSST-LLASNGF--PRPSTSRSTLWEAYP 342
++S+TAL+ P+ S+V+ SST + +S G P TS S L + P
Sbjct: 912 ITSSTALNTSTPITSSSVLNSSTPITSSTGLNTSTPITSSSVLNSSTP 959
Score = 27.5 bits (58), Expect = 0.87
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGF---PRPSTSRSTLWEAYP 342
++S+TAL+ P+ S+V+ SST + S+ P TS S L + P
Sbjct: 1968 ITSSTALNTSTPITSSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTP 2015
Score = 27.5 bits (58), Expect = 0.87
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPSTS 315
++S+TAL+ P+ S+V+ SST + S+ STS
Sbjct: 2616 ITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTS 2651
Score = 27.5 bits (58), Expect = 0.87
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPSTS 315
++S+TAL+ P+ S+V+ SST + S+ STS
Sbjct: 2844 ITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTS 2879
Score = 27.5 bits (58), Expect = 0.87
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPSTS 315
++S+TAL+ P+ S+V+ SST + S+ STS
Sbjct: 2940 ITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTS 2975
Score = 27.5 bits (58), Expect = 0.87
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPSTS 315
++S+TAL+ P+ S V+ SST + S+ ST+
Sbjct: 3420 ITSSTALNTSTPITSSTVVNSSTPITSSSVLNSSTA 3455
Score = 27.1 bits (57), Expect = 1.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 444 ITSSTALNTSTPITSSSVLNSSTPITSSSVLNSST 478
Score = 27.1 bits (57), Expect = 1.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 624 ITSSTALNTSTPITSSSVLNSSTPITSSSVLNSST 658
Score = 27.1 bits (57), Expect = 1.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASN---GFPRPSTSRSTLWEAYP 342
++S+TAL+ P+ S+V+ SST + S+ P TS S L + P
Sbjct: 708 ITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTP 755
Score = 27.1 bits (57), Expect = 1.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 972 ITSSTALNTSTPITSSSVLNSSTPITSSSVLNTST 1006
Score = 27.1 bits (57), Expect = 1.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASN---GFPRPSTSRSTLWEAYP 342
++S+TAL+ P+ S+V+ SST + S+ P TS S L + P
Sbjct: 1068 ITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTP 1115
Score = 27.1 bits (57), Expect = 1.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASN---GFPRPSTSRSTLWEAYP 342
++S+TAL+ P+ S+V+ SST + S+ P TS S L + P
Sbjct: 1584 ITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTP 1631
Score = 27.1 bits (57), Expect = 1.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASN---GFPRPSTSRSTLWEAYP 342
++S+TAL+ P+ S+V+ SST + S+ P TS S L + P
Sbjct: 1752 ITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTP 1799
Score = 27.1 bits (57), Expect = 1.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASN---GFPRPSTSRSTLWEAYP 342
++S+TAL+ P+ S+V+ SST + S+ P TS S L + P
Sbjct: 1776 ITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTP 1823
Score = 27.1 bits (57), Expect = 1.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASN---GFPRPSTSRSTLWEAYP 342
++S+TAL+ P+ S+V+ SST + S+ P TS S L + P
Sbjct: 1848 ITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTP 1895
Score = 27.1 bits (57), Expect = 1.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 1908 ITSSTALNTSTPITSSSVLNSSTPITSSSVLNSST 1942
Score = 27.1 bits (57), Expect = 1.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASN---GFPRPSTSRSTLWEAYP 342
++S+TAL+ P+ S+V+ SST + S+ P TS S L + P
Sbjct: 2040 ITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTP 2087
Score = 27.1 bits (57), Expect = 1.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 2100 ITSSTALNTSTPITSSSVLNSSTPITSSSVLNSST 2134
Score = 27.1 bits (57), Expect = 1.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASN---GFPRPSTSRSTLWEAYP 342
++S+TAL+ P+ S+V+ SST + S+ P TS S L + P
Sbjct: 2304 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTP 2351
Score = 27.1 bits (57), Expect = 1.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASN---GFPRPSTSRSTLWEAYP 342
++S+TAL+ P+ S+V+ SST + S+ P TS S L + P
Sbjct: 2712 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTP 2759
Score = 26.6 bits (56), Expect = 1.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 864 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNTST 898
Score = 26.6 bits (56), Expect = 1.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 1020 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNTST 1054
Score = 26.6 bits (56), Expect = 1.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 1128 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNTST 1162
Score = 26.6 bits (56), Expect = 1.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 1692 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNTST 1726
Score = 26.6 bits (56), Expect = 1.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 1800 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNTST 1834
Score = 26.6 bits (56), Expect = 1.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 2160 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNSST 2194
Score = 26.6 bits (56), Expect = 1.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 2472 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNTST 2506
Score = 26.6 bits (56), Expect = 1.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S TAL+ P+ S+V+ SST + S+ ST
Sbjct: 2568 ITSLTALNSSTPITSSSVLNSSTPITSSTVVNTST 2602
Score = 26.6 bits (56), Expect = 1.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 2772 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNTST 2806
Score = 26.6 bits (56), Expect = 1.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S V+ SST + S+ ST
Sbjct: 3036 ITSSTALNTSTPITSSTVLNSSTPITSSSVLNSST 3070
Score = 26.6 bits (56), Expect = 1.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 3384 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNSST 3418
Score = 26.2 bits (55), Expect = 2.0
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASN---GFPRPSTSRSTL 327
++S+TAL+ P+ S+V+ SST + S+ P TS S L
Sbjct: 660 ITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVL 702
Score = 26.2 bits (55), Expect = 2.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 1608 ITSSTALNTSTPITSSSVLNSSTPITSSTVLNSST 1642
Score = 26.2 bits (55), Expect = 2.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S V+ SST + S+ ST
Sbjct: 1644 ITSSTALNTSPPITSSTVVNSSTPITSSTVVNTST 1678
Score = 26.2 bits (55), Expect = 2.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 1872 ITSSTALNTSTPITSSSVLNSSTPITSSTVLNSST 1906
Score = 26.2 bits (55), Expect = 2.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPST 312
++S+TAL+ P+ S+V+ SST + S+ ST
Sbjct: 2064 ITSSTALNTSTPITSSSVLNSSTPITSSTVLNSST 2098
Score = 25.4 bits (53), Expect = 3.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 208 LSSTTALSGHMPLPRSAVITSSTLLASNGFPRPSTS 315
++S+T ++ P+ S+V+ SST + S+ STS
Sbjct: 2388 ITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTS 2423
>SPCC70.09c |mug9||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 208
Score = 25.4 bits (53), Expect = 3.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 205 VLSSTTALSGHMPLPRSAVITSSTLLASNGFPRPSTS 315
V+ ST P + +T STLLA + +PS S
Sbjct: 116 VIESTVISKSQSPSVKQLKLTESTLLAPSSSLKPSVS 152
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 24.6 bits (51), Expect = 6.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 214 STTALSGHMPLPRSAVITSSTLLASNGFPRPS 309
S + L MPLP S+ + SS L S + RP+
Sbjct: 308 SLSVLELQMPLPISSALWSSKELLSKDYWRPN 339
>SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 399
Score = 24.6 bits (51), Expect = 6.1
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -1
Query: 240 HMSAKSSSRT*YTL-NLMHLKIKLKNKTNRSTPKWQTELT 124
H K+SS T+ NL+H L N TN K+Q E T
Sbjct: 119 HEFYKNSSAWPITIRNLIHRHQPLSNITNNELMKYQEEAT 158
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 24.2 bits (50), Expect = 8.1
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 292 GFPRPSTSRSTLWEAYPRYVFPYTLATRGGARY 390
GFP S S T E Y FPY + T Y
Sbjct: 241 GFPNVSLSSITSQEWYRNANFPYPIITFATQNY 273
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,653,320
Number of Sequences: 5004
Number of extensions: 30457
Number of successful extensions: 112
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 144287194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -