Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5611
(679 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021434-1|AAX33582.1| 501|Drosophila melanogaster GH21414p pro... 30 3.3
AY060636-1|AAL28184.1| 501|Drosophila melanogaster GH05289p pro... 30 3.3
AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubuli... 30 3.3
AE014298-2158|ABC67184.1| 501|Drosophila melanogaster CG9201-PC... 30 3.3
AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB... 30 3.3
AY119114-1|AAM50974.1| 699|Drosophila melanogaster RE15216p pro... 29 4.4
AE014296-3763|AAS64918.1| 699|Drosophila melanogaster CG33217-P... 29 4.4
X58374-1|CAA41263.1| 702|Drosophila melanogaster crn protein. 29 5.8
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 29 5.8
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 29 5.8
AY051666-1|AAK93090.1| 702|Drosophila melanogaster LD21701p pro... 29 5.8
AL009195-5|CAA15705.1| 702|Drosophila melanogaster EG:30B8.1,FB... 29 5.8
AE014298-369|AAF45760.1| 702|Drosophila melanogaster CG3193-PA ... 29 5.8
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 29 5.8
AE014297-3462|AAN13982.2| 1230|Drosophila melanogaster CG6129-PC... 29 7.7
AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB... 29 7.7
AE014134-1194|AAF52458.2| 1833|Drosophila melanogaster CG18304-P... 29 7.7
>BT021434-1|AAX33582.1| 501|Drosophila melanogaster GH21414p
protein.
Length = 501
Score = 29.9 bits (64), Expect = 3.3
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Frame = -2
Query: 363 MEKVIKAVRERIRRNPVRKQNILSR-------EMKI-APRTMSRILKDDLGLAAYKRCTA 208
+E+ ++ RER++ NPV NIL R ++K P + IL+ LA A
Sbjct: 118 VEQRLERQRERLKSNPVLMANILKRLERSTCLQLKSELPEALREILRRRQWLANEYAIRA 177
Query: 207 YFLTDNLKEN-RVVKSKQLL-KRYAKGGHRKILFT---DENFLQLSNILTNKMTAFML 49
Y + E R ++ LL K Y + LF N L ++LT+K+ A +L
Sbjct: 178 YCKETQVAEKMRFLRHTMLLEKYYLFVPYYNALFVRMEKNNSWALGSVLTSKLCAVLL 235
>AY060636-1|AAL28184.1| 501|Drosophila melanogaster GH05289p
protein.
Length = 501
Score = 29.9 bits (64), Expect = 3.3
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Frame = -2
Query: 363 MEKVIKAVRERIRRNPVRKQNILSR-------EMKI-APRTMSRILKDDLGLAAYKRCTA 208
+E+ ++ RER++ NPV NIL R ++K P + IL+ LA A
Sbjct: 118 VEQRLERQRERLKSNPVLMANILKRLERSTCLQLKSELPEALREILRRRQWLANEYAIRA 177
Query: 207 YFLTDNLKEN-RVVKSKQLL-KRYAKGGHRKILFT---DENFLQLSNILTNKMTAFML 49
Y + E R ++ LL K Y + LF N L ++LT+K+ A +L
Sbjct: 178 YCKETQVAEKMRFLRHTMLLEKYYLFVPYYNALFVRMEKNNSWALGSVLTSKLCAVLL 235
>AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubulin
ring protein protein.
Length = 1092
Score = 29.9 bits (64), Expect = 3.3
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Frame = -2
Query: 363 MEKVIKAVRERIRRNPVRKQNILSR-------EMKI-APRTMSRILKDDLGLAAYKRCTA 208
+E+ ++ RER++ NPV NIL R ++K P + IL+ LA A
Sbjct: 709 VEQRLERQRERLKSNPVLMANILKRLERSTCLQLKSELPEALREILRRRQWLANEYAIRA 768
Query: 207 YFLTDNLKEN-RVVKSKQLL-KRYAKGGHRKILFT---DENFLQLSNILTNKMTAFML 49
Y + E R ++ LL K Y + LF N L ++LT+K+ A +L
Sbjct: 769 YCKETQVAEKMRFLRHTMLLEKYYLFVPYYNALFVRMEKNNSWALGSVLTSKLCAVLL 826
>AE014298-2158|ABC67184.1| 501|Drosophila melanogaster CG9201-PC,
isoform C protein.
Length = 501
Score = 29.9 bits (64), Expect = 3.3
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Frame = -2
Query: 363 MEKVIKAVRERIRRNPVRKQNILSR-------EMKI-APRTMSRILKDDLGLAAYKRCTA 208
+E+ ++ RER++ NPV NIL R ++K P + IL+ LA A
Sbjct: 118 VEQRLERQRERLKSNPVLMANILKRLERSTCLQLKSELPEALREILRRRQWLANEYAIRA 177
Query: 207 YFLTDNLKEN-RVVKSKQLL-KRYAKGGHRKILFT---DENFLQLSNILTNKMTAFML 49
Y + E R ++ LL K Y + LF N L ++LT+K+ A +L
Sbjct: 178 YCKETQVAEKMRFLRHTMLLEKYYLFVPYYNALFVRMEKNNSWALGSVLTSKLCAVLL 235
>AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB,
isoform B protein.
Length = 1092
Score = 29.9 bits (64), Expect = 3.3
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Frame = -2
Query: 363 MEKVIKAVRERIRRNPVRKQNILSR-------EMKI-APRTMSRILKDDLGLAAYKRCTA 208
+E+ ++ RER++ NPV NIL R ++K P + IL+ LA A
Sbjct: 709 VEQRLERQRERLKSNPVLMANILKRLERSTCLQLKSELPEALREILRRRQWLANEYAIRA 768
Query: 207 YFLTDNLKEN-RVVKSKQLL-KRYAKGGHRKILFT---DENFLQLSNILTNKMTAFML 49
Y + E R ++ LL K Y + LF N L ++LT+K+ A +L
Sbjct: 769 YCKETQVAEKMRFLRHTMLLEKYYLFVPYYNALFVRMEKNNSWALGSVLTSKLCAVLL 826
>AY119114-1|AAM50974.1| 699|Drosophila melanogaster RE15216p
protein.
Length = 699
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -2
Query: 402 CDRKRSGRPRSVRMEKVIKAVRERI-RRNPVRKQNILSREMKIAPRTMSRILKDDLGLAA 226
C + G + + +IK V + I R+P K+++ + MK++P T+ +LK L
Sbjct: 353 CSTLQEGSHCEIIADTLIKEVFDDILTRSPTTKKSVNAPYMKLSPETLFSMLKCSLSNED 412
Query: 225 YK 220
Y+
Sbjct: 413 YR 414
>AE014296-3763|AAS64918.1| 699|Drosophila melanogaster CG33217-PA
protein.
Length = 699
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -2
Query: 402 CDRKRSGRPRSVRMEKVIKAVRERI-RRNPVRKQNILSREMKIAPRTMSRILKDDLGLAA 226
C + G + + +IK V + I R+P K+++ + MK++P T+ +LK L
Sbjct: 353 CSTLQEGSHCEIIADTLIKEVFDDILTRSPTTKKSVNAPYMKLSPETLFSMLKCSLSNED 412
Query: 225 YK 220
Y+
Sbjct: 413 YR 414
>X58374-1|CAA41263.1| 702|Drosophila melanogaster crn protein.
Length = 702
Score = 29.1 bits (62), Expect = 5.8
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -2
Query: 375 RSVRMEKVIKAVRERIRRNPVRKQNIL----SREMKIAPRTMSRILKDDLGLAAYKRCTA 208
R +M KV K + + + +L R+++I P + + D LA Y++
Sbjct: 3 RPQKMPKVAKVKNKAPAEVQITAEQLLREAKERDLEILPPPPKQKISDPAELADYQQRKR 62
Query: 207 YFLTDNLKENRVVKS 163
DNL++NR+V S
Sbjct: 63 KTFEDNLRKNRMVVS 77
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -2
Query: 375 RSVRMEKVIKAVRERIRRNPVRKQNILSREMKIAPRTMSRILKDDLGLAAYKRCTAYFLT 196
+S + KV++ R+R+ R+ R + + I + +LK LAA KR A L
Sbjct: 297 KSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLA 356
Query: 195 DNLKEN 178
K+N
Sbjct: 357 KAKKQN 362
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -2
Query: 375 RSVRMEKVIKAVRERIRRNPVRKQNILSREMKIAPRTMSRILKDDLGLAAYKRCTAYFLT 196
+S + KV++ R+R+ R+ R + + I + +LK LAA KR A L
Sbjct: 297 KSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLA 356
Query: 195 DNLKEN 178
K+N
Sbjct: 357 KAKKQN 362
>AY051666-1|AAK93090.1| 702|Drosophila melanogaster LD21701p
protein.
Length = 702
Score = 29.1 bits (62), Expect = 5.8
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -2
Query: 375 RSVRMEKVIKAVRERIRRNPVRKQNIL----SREMKIAPRTMSRILKDDLGLAAYKRCTA 208
R +M KV K + + + +L R+++I P + + D LA Y++
Sbjct: 3 RPQKMPKVAKVKNKAPAEVQITAEQLLREAKERDLEILPPPPKQKISDPAELADYQQRKR 62
Query: 207 YFLTDNLKENRVVKS 163
DNL++NR+V S
Sbjct: 63 KTFEDNLRKNRMVVS 77
>AL009195-5|CAA15705.1| 702|Drosophila melanogaster
EG:30B8.1,FBgn0000377;crn protein.
Length = 702
Score = 29.1 bits (62), Expect = 5.8
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -2
Query: 375 RSVRMEKVIKAVRERIRRNPVRKQNIL----SREMKIAPRTMSRILKDDLGLAAYKRCTA 208
R +M KV K + + + +L R+++I P + + D LA Y++
Sbjct: 3 RPQKMPKVAKVKNKAPAEVQITAEQLLREAKERDLEILPPPPKQKISDPAELADYQQRKR 62
Query: 207 YFLTDNLKENRVVKS 163
DNL++NR+V S
Sbjct: 63 KTFEDNLRKNRMVVS 77
>AE014298-369|AAF45760.1| 702|Drosophila melanogaster CG3193-PA
protein.
Length = 702
Score = 29.1 bits (62), Expect = 5.8
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -2
Query: 375 RSVRMEKVIKAVRERIRRNPVRKQNIL----SREMKIAPRTMSRILKDDLGLAAYKRCTA 208
R +M KV K + + + +L R+++I P + + D LA Y++
Sbjct: 3 RPQKMPKVAKVKNKAPAEVQITAEQLLREAKERDLEILPPPPKQKISDPAELADYQQRKR 62
Query: 207 YFLTDNLKENRVVKS 163
DNL++NR+V S
Sbjct: 63 KTFEDNLRKNRMVVS 77
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -2
Query: 375 RSVRMEKVIKAVRERIRRNPVRKQNILSREMKIAPRTMSRILKDDLGLAAYKRCTAYFLT 196
+S + KV++ R+R+ R+ R + + I + +LK LAA KR A L
Sbjct: 297 KSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLA 356
Query: 195 DNLKEN 178
K+N
Sbjct: 357 KAKKQN 362
>AE014297-3462|AAN13982.2| 1230|Drosophila melanogaster CG6129-PC,
isoform C protein.
Length = 1230
Score = 28.7 bits (61), Expect = 7.7
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = -2
Query: 396 RKRSGRPRSVRMEKVIKAVRERIRRNPVRKQNILSREMKIAPRTMSRILKDDLG 235
R++S R + +R+E I +RE++ + R+Q + R K A R M L+ LG
Sbjct: 1137 REQSHRQQVLRLENQISMLREQLAQEAKRRQQYILRSSK-ANREMQH-LRSTLG 1188
>AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB,
isoform B protein.
Length = 2048
Score = 28.7 bits (61), Expect = 7.7
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = -2
Query: 396 RKRSGRPRSVRMEKVIKAVRERIRRNPVRKQNILSREMKIAPRTMSRILKDDLG 235
R++S R + +R+E I +RE++ + R+Q + R K A R M L+ LG
Sbjct: 1955 REQSHRQQVLRLENQISMLREQLAQEAKRRQQYILRSSK-ANREMQH-LRSTLG 2006
>AE014134-1194|AAF52458.2| 1833|Drosophila melanogaster CG18304-PA
protein.
Length = 1833
Score = 28.7 bits (61), Expect = 7.7
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = -2
Query: 393 KRSGRPRSVRMEKVIKAVRERIRRNPVRKQNILSREMKIAPRTMSRILKDDLGLAAYKRC 214
+++G E + +A RER K+ L E K+ PRT R+ +DL ++ +
Sbjct: 852 EKTGEVDQKMKESLAQAQRERDELTARLKRMQLEAEDKLPPRTAKRV--NDLTPKSHLKK 909
Query: 213 TAYFLTDNLKENRVVKS 163
L D + E RV+ S
Sbjct: 910 WVEELEDEISEMRVMLS 926
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,798,159
Number of Sequences: 53049
Number of extensions: 605468
Number of successful extensions: 1583
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -