Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5609
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            54   4e-09
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    26   0.92 
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       25   2.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.9  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   6.5  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   8.5  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 54.0 bits (124), Expect = 4e-09
 Identities = 22/59 (37%), Positives = 38/59 (64%)
 Frame = +3

Query: 9   AVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
           A+VVYDI N++SF +   W+ +++ +   +++I L GNK DL++ R V  EE  + A +
Sbjct: 100 AIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANSRVVDYEEAKQYADD 158



 Score = 31.1 bits (67), Expect = 0.032
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +1

Query: 193 VMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKPPEDMHEVILRQSPGDNKEQDSSC 366
           ++F+ETSAK   NV  +F  +A  LP  + A   P ++     +R +  +   Q+S C
Sbjct: 161 LLFMETSAKTAVNVNDIFLAIAKKLPKNEGA--GPQQN-----IRPTQNETNRQNSGC 211


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 26.2 bits (55), Expect = 0.92
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 7/30 (23%)
 Frame = -2

Query: 180 WPSCRLP-------RSRPASCPRDRSCCRP 112
           WPSCR P        +RP S PR R   +P
Sbjct: 268 WPSCRSPPARRRSRSTRPTSWPRSRPTSKP 297


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = +3

Query: 204 RDKRQSWLQC---*TVIPKSSCCPAWHGLCRKQTSRRHARGDLE 326
           RD+R+ W+QC    T I   + C +++ + R+  ++   R  L+
Sbjct: 217 RDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLD 260


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 369 LLDAATEAHQRSPAGDGGCRLTLNTQTIYT 458
           L+D     H R P G      T +T+T+YT
Sbjct: 723 LIDGRLLLHIRDPLGGISSNKTDSTETVYT 752


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 374 RRRHRSSPALTGRRRWLQA 430
           RR HR SPA   + RW +A
Sbjct: 229 RRFHRQSPAHRRKPRWRRA 247


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 162 EGDKKAKETERDVHRDKRQSWLQ 230
           +G+++A   +  +HR + Q WLQ
Sbjct: 69  KGNQRATARKYGIHRRQIQKWLQ 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,172
Number of Sequences: 2352
Number of extensions: 14810
Number of successful extensions: 40
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)