Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5609
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 121 4e-28
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 112 2e-25
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 65 4e-11
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 64 8e-11
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 58 6e-09
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 58 6e-09
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 58 7e-09
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 51 6e-07
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 50 1e-06
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 50 2e-06
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 49 3e-06
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 49 3e-06
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 49 3e-06
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 49 3e-06
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 49 3e-06
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 46 2e-05
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 45 6e-05
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 44 7e-05
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 44 7e-05
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 44 1e-04
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 44 1e-04
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 42 3e-04
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 42 3e-04
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 42 4e-04
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 41 7e-04
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 41 7e-04
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 41 9e-04
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 41 9e-04
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 40 0.001
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 40 0.001
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 40 0.002
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 40 0.002
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 39 0.004
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 38 0.006
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 38 0.006
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 36 0.019
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 36 0.034
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 35 0.045
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 34 0.078
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 34 0.078
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 34 0.10
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 34 0.10
Z67990-5|CAA91936.2| 638|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 30 1.3
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 30 1.3
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 30 1.3
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 30 1.3
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 30 1.3
AB012617-1|BAA33488.1| 638|Caenorhabditis elegans FLR-1 protein. 30 1.3
Z70213-8|CAA94170.4| 253|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z70213-7|CAH19092.1| 199|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z54284-5|CAA91062.1| 444|Caenorhabditis elegans Hypothetical pr... 30 1.7
U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 5.1
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 27 8.9
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 27 8.9
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 27 8.9
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 27 8.9
AF040661-7|AAG24223.1| 439|Caenorhabditis elegans Hypothetical ... 27 8.9
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 121 bits (292), Expect = 4e-28
Identities = 56/61 (91%), Positives = 61/61 (100%)
Frame = +3
Query: 3 TVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAK 182
TVAVVVYDITN+NSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQV+T+EG++KAK
Sbjct: 84 TVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVTTDEGERKAK 143
Query: 183 E 185
E
Sbjct: 144 E 144
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = +1
Query: 184 KLNVMFIETSAKAGYNVKQLFRRVAAALPGM 276
+LNVMFIETSAKAGYNVKQLFRR+A ALPG+
Sbjct: 144 ELNVMFIETSAKAGYNVKQLFRRIAGALPGI 174
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 112 bits (270), Expect = 2e-25
Identities = 50/61 (81%), Positives = 59/61 (96%)
Frame = +3
Query: 3 TVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAK 182
+VAVVVYDITNANSFHQT+KW+DDVR ERG DVII+LVGNKTDL+DKRQVSTE+G+KKA+
Sbjct: 85 SVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKRQVSTEDGEKKAR 144
Query: 183 E 185
+
Sbjct: 145 D 145
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/62 (53%), Positives = 41/62 (66%)
Frame = +1
Query: 187 LNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKPPEDMHEVILRQSPGDNKEQDSSC 366
LNVMFIETSAKAGYNVKQLFR++A ALPG+ + + PE + VI+ + Q C
Sbjct: 146 LNVMFIETSAKAGYNVKQLFRKIATALPGI--VQEETPEQPNIVIMNPPKDAEESQGRQC 203
Query: 367 VC 372
C
Sbjct: 204 PC 205
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 65.3 bits (152), Expect = 4e-11
Identities = 26/59 (44%), Positives = 43/59 (72%)
Frame = +3
Query: 9 AVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
A++VYDIT ++F+ + W++D R S+++IML+GNK+DL +R+V EEG+ A+E
Sbjct: 82 ALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEARREVKREEGEAFARE 140
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 64.1 bits (149), Expect = 8e-11
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
++VYDITNA SF +KW+ ++ DV+ M++GNK D+SD+R VS E G+K A++
Sbjct: 86 MLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRRVVSRERGEKIAQD 143
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +3
Query: 9 AVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
A++VYDIT SF +W+ D+R +++IML+GNK+DL R V+TEEG+ AK+
Sbjct: 82 ALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDLKAVRDVTTEEGEAFAKK 140
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 59.3 bits (137), Expect = 2e-09
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = +3
Query: 9 AVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
A++VYDIT+ SF+ W+ D++ D++I+L+GNK+DL R+V EEG+ A+E
Sbjct: 82 ALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDLEADREVRKEEGEAFARE 140
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 58.0 bits (134), Expect = 6e-09
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
++VYDITN SF WI ++ SDV M++GNK D+ ++R+VS + G++ A E
Sbjct: 85 ILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQLAIE 142
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 58.0 bits (134), Expect = 6e-09
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
++VYDITN SF WI ++ SDV M++GNK D+ ++R+VS + G++ A E
Sbjct: 85 ILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQLAIE 142
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 57.6 bits (133), Expect = 7e-09
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +3
Query: 9 AVVVYDITNANSFHQTSKWIDDVRTERGS-DVIIMLVGNKTDLSDKRQVSTEEGDKKA 179
A++VYD+T+ N+F KW+ D+ G+ D + L+GNKTDL +KR+V+ EG A
Sbjct: 132 ALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGNKTDLVEKREVTEAEGKAMA 189
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 57.2 bits (132), Expect = 1e-08
Identities = 22/59 (37%), Positives = 39/59 (66%)
Frame = +3
Query: 9 AVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
A+VVYDITN SF + W+ +++ + ++++ L GNK D+++KR V EE + A++
Sbjct: 95 AIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEYEEANAYAED 153
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 193 VMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKP 297
++F+ETSAK NV +F +A LP + A+ +P
Sbjct: 156 LLFMETSAKTSMNVNDIFMAIAKKLP-IGPAQGEP 189
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = +3
Query: 9 AVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
A++VYDIT ++++ S W+ D ++ + I L+GNK DL D+R V EE A+E
Sbjct: 87 ALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLEDQRDVPYEEAKAFAEE 145
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 51.2 bits (117), Expect = 6e-07
Identities = 20/57 (35%), Positives = 39/57 (68%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAK 182
++V+DIT+ SF + W+ +++T G+ I++VGNK DL ++RQV+ ++ + A+
Sbjct: 89 LLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLEEERQVTRQDAEAYAE 145
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGD 170
V+ YDIT SF +WIDDV +V+ +L+G K DL D+R + EE +
Sbjct: 87 VLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCDLEDQRAIEAEEAE 139
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSD-VIIMLVGNKTDLSDKRQVSTEEG 167
VVVY IT+ +FH + + +GS+ V I+LVGNK DLS +RQV +EEG
Sbjct: 79 VVVYSITSQQTFHDIRNMKEQIVRVKGSENVPILLVGNKCDLSHQRQVRSEEG 131
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 18 VYDITNANSFHQTSK-WIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKETER 194
VYD+TN SF K W+ +++ + ++MLVGNK D+ +R+V + +K A
Sbjct: 85 VYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQERKVDFDRAEKLASRLGV 144
Query: 195 DVHRDKRQSWLQC 233
++ ++ + C
Sbjct: 145 SLYEVSAKTGINC 157
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +3
Query: 9 AVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKET 188
A++VYDI ++ +W+ ++R +++IMLVGNK+DL R V T+E A+
Sbjct: 87 ALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVPTDEAKIYAERN 146
Query: 189 E 191
+
Sbjct: 147 Q 147
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
+++YDITN SF+ W ++T + ++LVGNK D+ +R VS + G + A +
Sbjct: 99 ILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQ 156
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 184 KLNVMFIETSAKAGYNVKQLFRRVAAAL-PGMDSAENKPPEDMHEVILRQSPGDNKEQDS 360
+L + F ETSAK NVK +F ++ + M + +K P+ + ++ K
Sbjct: 156 QLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLDKDPQQQPKGQKLEANPTQKPAQQ 215
Query: 361 SCVC 372
C C
Sbjct: 216 QCNC 219
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
+++YDITN SF+ W ++T + ++LVGNK D+ +R VS + G + A +
Sbjct: 99 ILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQ 156
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 184 KLNVMFIETSAKAGYNVKQLFRRVAAAL-PGMDSAENKPPEDMHEVILRQSPGDNKEQDS 360
+L + F ETSAK NVK +F ++ + M + +K P+ + ++ K
Sbjct: 156 QLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLDKDPQQQPKGQKLEANPTQKPAQQ 215
Query: 361 SCVC 372
C C
Sbjct: 216 QCNC 219
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
+++YDITN SF+ W ++T + ++LVGNK D+ +R VS + G + A +
Sbjct: 99 ILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQ 156
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 184 KLNVMFIETSAKAGYNVKQLFRRVAAAL-PGMDSAENKPPEDMHEVILRQSPGDNKEQDS 360
+L + F ETSAK NVK +F ++ + M + +K P+ + ++ K
Sbjct: 156 QLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLDKDPQQQPKGQKLEANPTQKPAQQ 215
Query: 361 SCVC 372
C C
Sbjct: 216 QCNC 219
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
+++YDITN SF+ W ++T + ++LVGNK D+ +R VS + G + A +
Sbjct: 113 ILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQ 170
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 184 KLNVMFIETSAKAGYNVKQLFRRVAAAL-PGMDSAENKPPEDMHEVILRQSPGDNKEQDS 360
+L + F ETSAK NVK +F ++ + M + +K P+ + ++ K
Sbjct: 170 QLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLDKDPQQQPKGQKLEANPTQKPAQQ 229
Query: 361 SCVC 372
C C
Sbjct: 230 QCNC 233
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
+++YDITN SF+ W ++T + ++LVGNK D+ +R VS + G + A +
Sbjct: 99 ILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQ 156
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 184 KLNVMFIETSAKAGYNVKQLFRRVAAAL-PGMDSAENKPPEDMHEVILRQSPGDNKEQDS 360
+L + F ETSAK NVK +F ++ + M + +K P+ + ++ K
Sbjct: 156 QLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLDKDPQQQPKGQKLEANPTQKPAQQ 215
Query: 361 SCVC 372
C C
Sbjct: 216 QCNC 219
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERG----SDVIIMLVGNKTDLSDKRQVSTEEGDKKA 179
+ +YD TN SF W+ + G S + LVG K+D+ +RQV+ EEG+ A
Sbjct: 95 LAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLVGTKSDMDSQRQVNYEEGEYFA 154
Query: 180 K 182
K
Sbjct: 155 K 155
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTE 161
+VVYDIT+ +F+ +W+ ++ +V +LVGNK DL+ KR V T+
Sbjct: 88 IVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAKRAVETQ 137
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 184 KLNVMFIETSAKAGYNVKQLFRRVAAAL 267
+L + F+ETSAK+ NV+Q F +A+ +
Sbjct: 145 QLGIPFLETSAKSSTNVEQAFLTMASEI 172
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +3
Query: 6 VAVVVYDITNANSFHQTSKWIDDVRTERGSD---VIIMLVGNKTDLSDKRQVSTE 161
+ +VYD+TN+ SF W+ V+ S V ++L+GNKTDL ++R VS E
Sbjct: 111 IVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNKTDLEERRVVSVE 165
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDD-VRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
++VY I + SF S + VRT + + I++VGNKTDLS +R V EEG++ A++
Sbjct: 89 ILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIVIVGNKTDLSTQRVVRAEEGEELARQ 147
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVII-MLVGNKTDLSDKRQVSTEEGDKKAK 182
+ VYD+T+ +SF + + W+ +V T +D II M+V NK D+ + R V+ EEG K AK
Sbjct: 88 ICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMPN-RVVTREEGLKFAK 144
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +3
Query: 9 AVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEE 164
A++VYDI+ ++ +W+ +R D++I LVGNK+DLS V T+E
Sbjct: 84 ALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLS--HAVPTDE 133
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVI---IMLVGNKTDLSDKRQVSTEEGDKKAK 182
+++Y +TN SF + I+ ++ +G+ + IMLVGNK D KR+VS+ G K A
Sbjct: 13 ILIYSVTNKQSFAELVPIIEMMKEVKGNAIAETPIMLVGNKKDEESKREVSSNSGQKVAT 72
Query: 183 ETE 191
E
Sbjct: 73 NME 75
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAK--- 182
V+V+ + ++F + D+ RG +V ++LVGNK+DL++ RQV E A+
Sbjct: 79 VLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNKSDLAETRQVDESEAHNFAEKLK 138
Query: 183 ----ETERDVHRDKRQSWLQC*TVIPKSS 257
ET ++++ + + +C +I KS+
Sbjct: 139 IPYFETSARLNQNVSEVFEECAVLIQKSA 167
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNK 125
++VYDITNA SF +KW+ ++ DV+ M++GNK
Sbjct: 86 MLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNK 123
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAK 182
++VYDI N SF W+ ++ V + LVGNK DL R V T+EG + A+
Sbjct: 80 LLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL--PRAVPTDEGKRLAE 134
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAK 182
++VYDI N SF W+ ++ V + LVGNK DL R V T+EG + A+
Sbjct: 80 LLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL--PRAVPTDEGKRLAE 134
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNK 125
++VYDITN SF WI ++ SDV M++GNK
Sbjct: 85 ILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVI-IMLVGNKTDLSDKRQVSTEEGDKKAKE 185
++++DITN SF W+ ++ + I++ GNK DL ++RQVST + A +
Sbjct: 93 ILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVSTARAKQLADQ 151
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVI-IMLVGNKTDLSDKRQVSTEEGDKKAKE 185
++++DITN SF W+ ++ + I++ GNK DL ++RQVST + A +
Sbjct: 93 ILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVSTARAKQLADQ 151
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDV-RTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
V+VY IT ++F+ D + R + +V ++LVGNK DL D+R V ++G A++
Sbjct: 79 VLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILVGNKCDLEDERVVGKDQGQNLARQ 137
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 40.7 bits (91), Expect = 9e-04
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVII-MLVGNKTDLSDKRQVSTEEGDKKAKET 188
+ VYD+T+ +SF + + W+ +V T +D II M+V NK D+ K + + G K +
Sbjct: 61 ICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMVRKSRFCSIFGLKNNFQP 120
Query: 189 ERDVHRDK 212
R V R++
Sbjct: 121 NRVVTREE 128
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQV 152
VVVYD+TN SF +W+ ++ S V +LVGNK + +++R V
Sbjct: 87 VVVYDVTNGESFGNVKRWLQEIENNCDS-VQKVLVGNKCEENERRVV 132
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Frame = +3
Query: 6 VAVVVYDITNANSFHQTSKWIDDVRTERGSDVII------MLVGNKTDLSDKRQVSTEEG 167
V VVVYD+T+ SF ++ R R V+ +LVGNKTDL RQVS EG
Sbjct: 81 VYVVVYDVTSQLSFQYAEGILE--RISRHEHVLCPREHRTLLVGNKTDLERYRQVSETEG 138
Query: 168 DKKAKE 185
++ A +
Sbjct: 139 ERLASQ 144
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEG 167
V+VYD++ SF +W+ ++ + V+ +LVGNK D D+R+V G
Sbjct: 84 VLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVGNKVDKGDEREVPERIG 135
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDL 134
V+++D+T+ SF WID VR ++ LVGNK DL
Sbjct: 280 VLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCLVGNKMDL 320
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSD--VIIMLVGNKTDLSDKRQVSTEEGDKKAKE 185
+ V+ I + SF T+++ + + + SD V I+LVGNK D+ D+R VS E ++A++
Sbjct: 93 ICVFSILDMESFEATNEFREQILRVKNSDSSVPIVLVGNKGDMRDQRVVSAELCRQRAEQ 152
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 9 AVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 131
A++VYDI ++ +W+ ++R +++IM VGNK D
Sbjct: 87 ALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGNKCD 127
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 9 AVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDL 134
A++VYD+ SF + WI+ ++ + I+LVGNK D+
Sbjct: 537 AILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVDM 578
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTER---GSDVIIMLVGNKTDLSDKRQVSTEE 164
V VYD+T SF+ + WI + S+V +L+GNK D+ +VST+E
Sbjct: 178 VFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKCDVECTNRVSTDE 231
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDV---RTERGSDVI-IMLVGNKTDLSDKRQVSTE 161
V+ +D+TNA SF W D+ + R D +L+GNK DL +R VS++
Sbjct: 86 VLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKVDLESQRAVSSK 139
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 35.5 bits (78), Expect = 0.034
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +3
Query: 57 SKWIDDVRTERGSDVIIMLVGNKTDL---SDKRQVSTEEGDKK 176
S WI ++R G +V IMLVG K DL +D R TE+ K+
Sbjct: 96 STWIPEIRKYAGDNVPIMLVGTKNDLVDDADSRNTVTEDYAKR 138
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAK 182
+++Y + + SF+ ++ + R + I+LVG+K D+ KR V++ EG + A+
Sbjct: 293 IIMYSVVDRQSFYHAAEIFKRLEHSREHNQPIVLVGSKKDMRVKRVVTSFEGQQLAR 349
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 34.3 bits (75), Expect = 0.078
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 131
+VV+ +A+S + + D+ RG+ V ++LV NKTD
Sbjct: 99 LVVFAADDASSLEEALSTLSDIHARRGNSVPVLLVANKTD 138
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 34.3 bits (75), Expect = 0.078
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +3
Query: 3 TVAVVVYDITNANSFHQTSKWIDDVRTERGSDVI---IMLVGNKTDLSDKRQVSTEEGDK 173
T+ +V+Y++ N SF ++ ++ + ++ + + L+GNK DL + +ST EG
Sbjct: 245 TLYIVMYNMDNRQSFIYATQILERITLANLNNPVPLQLFLIGNKCDLKRNQVISTNEGKS 304
Query: 174 KAKETERD 197
A+ + D
Sbjct: 305 VARTFKCD 312
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSD-VIIMLVGNKTDLSDK 143
++V+ + A SF + + + +R + SD V ++LVGNK DLS +
Sbjct: 79 LLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDLSSR 123
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERGSD-VIIMLVGNKTDLSDK 143
++V+ + A SF + + + +R + SD V ++LVGNK DLS +
Sbjct: 82 LLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDLSSR 126
>Z67990-5|CAA91936.2| 638|Caenorhabditis elegans Hypothetical
protein F02D10.5 protein.
Length = 638
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/68 (22%), Positives = 28/68 (41%)
Frame = +3
Query: 18 VYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKETERD 197
V+ N+ Q + + ER ++I+ G D+ D++ D+K
Sbjct: 455 VWGTVNSTRQQQFVDAVAEEEKERSESIVIIQNGRNDDMDDQKPSRFPGADRKLSGNSIH 514
Query: 198 VHRDKRQS 221
+H D+R S
Sbjct: 515 IHLDRRNS 522
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERG-SDVIIMLVGNKTDLSDKRQ--VSTEEGDKKAK 182
V V+++ + S+ ++ R SD+ ++LVG K +S+KR ++ +EG + A
Sbjct: 101 VFVFNVCSIQSYDSIQALAHEMSKYRNISDLPLILVGTKDHISEKRARVITEDEGRQLAA 160
Query: 183 ETERDVHRDKRQSWLQC*TVIPKSSCC 263
+ +R + + ++ + K +CC
Sbjct: 161 QMKRCSYFETSSTYGTNVERVFKEACC 187
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERG-SDVIIMLVGNKTDLSDKRQ--VSTEEGDKKAK 182
V V+++ + S+ ++ R SD+ ++LVG K +S+KR ++ +EG + A
Sbjct: 149 VFVFNVCSIQSYDSIQALAHEMSKYRNISDLPLILVGTKDHISEKRARVITEDEGRQLAA 208
Query: 183 ETERDVHRDKRQSWLQC*TVIPKSSCC 263
+ +R + + ++ + K +CC
Sbjct: 209 QMKRCSYFETSSTYGTNVERVFKEACC 235
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERG-SDVIIMLVGNKTDLSDKRQ--VSTEEGDKKAK 182
V V+++ + S+ ++ R SD+ ++LVG K +S+KR ++ +EG + A
Sbjct: 305 VFVFNVCSIQSYDSIQALAHEMSKYRNISDLPLILVGTKDHISEKRARVITEDEGRQLAA 364
Query: 183 ETERDVHRDKRQSWLQC*TVIPKSSCC 263
+ +R + + ++ + K +CC
Sbjct: 365 QMKRCSYFETSSTYGTNVERVFKEACC 391
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERG-SDVIIMLVGNKTDLSDKRQ--VSTEEGDKKAK 182
V V+++ + S+ ++ R SD+ ++LVG K +S+KR ++ +EG + A
Sbjct: 305 VFVFNVCSIQSYDSIQALAHEMSKYRNISDLPLILVGTKDHISEKRARVITEDEGRQLAA 364
Query: 183 ETERDVHRDKRQSWLQC*TVIPKSSCC 263
+ +R + + ++ + K +CC
Sbjct: 365 QMKRCSYFETSSTYGTNVERVFKEACC 391
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTERG-SDVIIMLVGNKTDLSDKRQ--VSTEEGDKKAK 182
V V+++ + S+ ++ R SD+ ++LVG K +S+KR ++ +EG + A
Sbjct: 149 VFVFNVCSIQSYDSIQALAHEMSKYRNISDLPLILVGTKDHISEKRARVITEDEGRQLAA 208
Query: 183 ETERDVHRDKRQSWLQC*TVIPKSSCC 263
+ +R + + ++ + K +CC
Sbjct: 209 QMKRCSYFETSSTYGTNVERVFKEACC 235
>AB012617-1|BAA33488.1| 638|Caenorhabditis elegans FLR-1 protein.
Length = 638
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/68 (22%), Positives = 28/68 (41%)
Frame = +3
Query: 18 VYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKETERD 197
V+ N+ Q + + ER ++I+ G D+ D++ D+K
Sbjct: 455 VWGTVNSTRQQQFVDAVAEEEKERSESIVIIQNGRNDDMDDQKPSRFPGADRKLSGNSIH 514
Query: 198 VHRDKRQS 221
+H D+R S
Sbjct: 515 IHLDRRNS 522
>Z70213-8|CAA94170.4| 253|Caenorhabditis elegans Hypothetical
protein ZK930.3a protein.
Length = 253
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/59 (28%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = +3
Query: 24 DITNANSF-HQTSKWIDDVRTER--GSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKETE 191
++ N F +T+K ID++ E+ S++I ++ +K+DL +R+++ E +KK +E++
Sbjct: 47 ELENTEKFIKETAKTIDELNKEKEEHSEIIQLINQDKSDL--EREIAAAETEKKDRESK 103
>Z70213-7|CAH19092.1| 199|Caenorhabditis elegans Hypothetical
protein ZK930.3b protein.
Length = 199
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/59 (28%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = +3
Query: 24 DITNANSF-HQTSKWIDDVRTER--GSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKETE 191
++ N F +T+K ID++ E+ S++I ++ +K+DL +R+++ E +KK +E++
Sbjct: 23 ELENTEKFIKETAKTIDELNKEKEEHSEIIQLINQDKSDL--EREIAAAETEKKDRESK 79
>Z54284-5|CAA91062.1| 444|Caenorhabditis elegans Hypothetical
protein D2085.6 protein.
Length = 444
Score = 29.9 bits (64), Expect = 1.7
Identities = 30/123 (24%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Frame = +3
Query: 279 LCRKQTSRRHARGDLETIARRQQGAGQQLCLLDAATEAHQRSPAGDGGCRLTLNTQTIYT 458
L R+ H ++A G + L T+ H D LT Y+
Sbjct: 92 LLRENVQIIHGHSTFSSLAHETLMIGGLMGLRTVFTD-HSLFGFADASAILTNKLVLQYS 150
Query: 459 YINVSFDGCISPDDGPQVNYRNPISKSVVSIYLNTIKYALFTD--LFWFTYESTIIKAGN 632
INV C+S R + + VS N I+ +LFT +F +TI+ G
Sbjct: 151 LINVDQTICVSYTSKENTVLRGKLDPNKVSTIPNAIETSLFTPDRNQFFNNPTTIVFLGR 210
Query: 633 LTF 641
L +
Sbjct: 211 LVY 213
>U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical
protein M03F4.6 protein.
Length = 413
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = -1
Query: 361 CCPAPCCRRAIVSRSPRACLREVCFRQSPCQAGQQLLFGITV 236
CCP PC R CL + R PCQ QQ GIT+
Sbjct: 264 CCPRPC-RDPTPLYVNGQCL-SIAHRGDPCQIDQQCEGGITM 303
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.3 bits (60), Expect = 5.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 364 NCCPAPCCR 338
NCCP PCCR
Sbjct: 95 NCCPKPCCR 103
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 6 VAVVVYDITNANSFHQTS-KWIDDVRTERGSDVIIMLVGNKTD 131
V V+VY + + SF S W +V T+R ++LVG + D
Sbjct: 83 VFVIVYSVVDLQSFEDVSHHWYPEV-TKRNPGTKLILVGTQAD 124
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 184 KLNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENK 294
+L F E SA +N+KQ+F AA L G++ +N+
Sbjct: 145 RLGAEFFECSALTQHNLKQMFD--AAILAGLEGKKNR 179
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = -1
Query: 424 QPPSPAGERW*ASVAASNKHNCC--PAPCCRRAIVSRSPRACLRE--VCFRQSP 275
QP P + + NCC PAPCC I P C + +C + +P
Sbjct: 624 QPQYPQSYQQPSCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP 677
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = -1
Query: 424 QPPSPAGERW*ASVAASNKHNCC--PAPCCRRAIVSRSPRACLRE--VCFRQSP 275
QP P + + NCC PAPCC I P C + +C + +P
Sbjct: 269 QPQYPQSYQQPSCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP 322
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = -1
Query: 424 QPPSPAGERW*ASVAASNKHNCC--PAPCCRRAIVSRSPRACLRE--VCFRQSP 275
QP P + + NCC PAPCC I P C + +C + +P
Sbjct: 221 QPQYPQSYQQPSCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP 274
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
K08E7.5a protein.
Length = 1221
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = -1
Query: 424 QPPSPAGERW*ASVAASNKHNCC--PAPCCRRAIVSRSPRACLRE--VCFRQSP 275
QP P + + NCC PAPCC I P C + +C + +P
Sbjct: 949 QPQYPQSYQQPSCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP 1002
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +3
Query: 12 VVVYDITNANSFHQTSKWIDDVRTE---RGSDVIIMLVGNK 125
V VYD+T SF+ + WI + S+V +L+GNK
Sbjct: 25 VFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNK 65
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 27.5 bits (58), Expect = 8.9
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Frame = +3
Query: 249 KSSCCPAWH----GLCRKQTSRRHARGDLETIARRQQGAGQQLCLLDAATEAHQRSPAGD 416
K C A H G+C+++++ A +T + R++ G C T A D
Sbjct: 1412 KRCICAAQHVAIRGICKQKSAPAFAAPG-DTCSMREKCTGGATCFEGMCT-CDDHHFAED 1469
Query: 417 GGCRLTLNTQTIYTYIN-----VSFDGCISPDDGPQ 509
G CR + ++N + GC+ PD+ PQ
Sbjct: 1470 GYCRPIEARSSKVQFVNGAGLRKTSSGCLRPDETPQ 1505
>AF040661-7|AAG24223.1| 439|Caenorhabditis elegans Hypothetical
protein W10G11.17 protein.
Length = 439
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 153 STEEGDKKAKETERDVHRDKRQS---WLQC*TVI 245
S EE +KK+ ET DVH+D ++ WL VI
Sbjct: 266 SDEEDEKKSSETVIDVHQDSGENDEDWLNVRQVI 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,409,917
Number of Sequences: 27780
Number of extensions: 332465
Number of successful extensions: 1133
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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