Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5607
(744 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0240 + 8196140-8198248,8198381-8198650 32 0.42
11_01_0657 + 5322295-5323367,5323436-5323555,5323743-5323791,532... 31 0.73
01_06_0944 + 33211652-33212427,33212492-33212660,33212825-332129... 30 2.2
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 29 2.9
11_01_0658 + 5342508-5343602,5343697-5343764,5343994-5344042,534... 29 3.9
03_01_0236 + 1851336-1851683 29 3.9
01_06_1008 + 33760332-33761039 29 3.9
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 29 5.2
07_03_0657 + 20362266-20362488,20362576-20362698,20362779-203628... 29 5.2
12_02_0738 + 22669557-22669756,22669868-22669916,22670620-226706... 28 6.8
11_06_0368 + 22756988-22758205 28 6.8
10_08_1037 - 22477358-22478752 28 6.8
04_04_1695 + 35433975-35437040 28 6.8
01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159 28 6.8
01_01_0326 - 2642408-2643607 28 6.8
10_07_0028 + 12019827-12020000,12020083-12020505,12020583-120206... 28 9.0
04_04_1405 - 33305948-33309676,33309749-33310468,33310533-333114... 28 9.0
02_05_0936 - 32875479-32875573,32875794-32876028,32877752-328778... 28 9.0
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 28 9.0
01_01_0889 + 7008077-7009261 28 9.0
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = +2
Query: 338 PQPQKPTSMEQPGVSGHSPHTVP----GRSSW-GGLNVAYEMQQDPNKPGVSGMASTSKD 502
P P +P + PG G P +P G++ + G Y M P+ P ++ M +
Sbjct: 598 PIPGQPQVIRMPGSMGPMPTNIPPPPPGQNPYMPGPPRPYSMPPPPHMPTMATMVNPIGI 657
Query: 503 NMGPVPICPMPPA 541
P P+ P PPA
Sbjct: 658 PQPPPPLPPQPPA 670
>11_01_0657 +
5322295-5323367,5323436-5323555,5323743-5323791,
5323968-5324084,5324200-5324268,5324394-5324488,
5325183-5325521,5327043-5327084,5327814-5327907,
5328121-5328190,5328719-5329677
Length = 1008
Score = 31.5 bits (68), Expect = 0.73
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +2
Query: 314 PSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMAST 493
PS + Q + + P S + P+T ++ +N +Q +P+ S M +T
Sbjct: 761 PSPSVVGLLQGSMNSRQDHPMSSANGPYTSGNSAAIPKVNSTTSLQSNPSTSFPSPMPTT 820
Query: 494 SKDNMGPVP 520
S +NM P P
Sbjct: 821 SNNNMMPAP 829
>01_06_0944 +
33211652-33212427,33212492-33212660,33212825-33212936,
33213061-33213159,33213237-33213394,33214911-33215062,
33215162-33215249,33215399-33215476,33215516-33215690,
33216701-33217002
Length = 702
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 529 RAYGNRAHIVFTSTGHPTDTWFIWILLHFVG 437
R+ NR+ + + S +PTDTW + L FVG
Sbjct: 144 RSVSNRSRLRWQSFDYPTDTWLQGMNLGFVG 174
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 314 PSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQ 454
P +HQP P + P V H V G S+ A++MQQ
Sbjct: 439 PQMQAYHQPPPMSHAQPQNPSV-----HAVTGHQSFSQPQPAHQMQQ 480
>11_01_0658 +
5342508-5343602,5343697-5343764,5343994-5344042,
5344217-5344333,5344438-5344506,5344631-5344725,
5345580-5345658,5346499-5346563,5347368-5347461,
5347675-5347744,5348363-5349357
Length = 931
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +2
Query: 314 PSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMAST 493
PS + Q + + P S + P+T ++ +N +Q P+ S + +T
Sbjct: 673 PSPSVVGLLQGSMNSRQDHPMSSANGPYTSGNSAAIPKVNSTTSLQSTPSTSFPSPVPTT 732
Query: 494 SKDNMGPVP 520
S +NM P P
Sbjct: 733 SNNNMMPAP 741
>03_01_0236 + 1851336-1851683
Length = 115
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 341 QPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVP 520
QPQ + P +S P T R ++GG A E ++DP +P S S V
Sbjct: 36 QPQLQREHQPPNISEMKPLT---REAYGGGMYANEGRRDPTRPRASATQSADGPEEAAVR 92
Query: 521 ICPMPP 538
PP
Sbjct: 93 PKHAPP 98
>01_06_1008 + 33760332-33761039
Length = 235
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 440 YEMQQDPNKPGVSGMASTSKDNMGPVPICPMPPAIRNKKRAAMASVVNMAP 592
Y M + V+ +A + D+ V + P PPA+ K AA +N P
Sbjct: 181 YRMMKLAPPVTVAAVAQSDSDSSSVVDLAPSPPAVTANKAAAFDLDLNRPP 231
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.7 bits (61), Expect = 5.2
Identities = 35/130 (26%), Positives = 50/130 (38%), Gaps = 5/130 (3%)
Frame = +2
Query: 308 PGPSQHIFHQPQPQKPTSME--QPGV-SGHSPHTVPG-RSSWGGLNVAYEMQQDPNKPGV 475
P P QH +P P+ P S + GV G + V G L ++ PN G
Sbjct: 45 PAPKQHRGPRPAPRNPGSAKPLTAGVPGGRTRRAVLGIIRKVRSLELSDPRTPSPNGGGG 104
Query: 476 SGMASTSKDNMG-PVPICPMPPAIRNKKRAAMASVVNMAPGSYASWSFRSPVPTRTVCNT 652
S +ST+ + +PI P PP ++ + P + A V R
Sbjct: 105 SSSSSTATARVPFHLPIHPPPP--EREEEEEKKGIRRAVPWAAARDEETKVVLRREKKTR 162
Query: 653 YRTRHETEME 682
TR ETE+E
Sbjct: 163 VPTRAETELE 172
>07_03_0657 +
20362266-20362488,20362576-20362698,20362779-20362867,
20363016-20363121,20363211-20363308,20363717-20363986,
20364310-20364393,20364579-20364599
Length = 337
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 23 NWEAGPSCSSEMQEHEKYIKKAKTDHP 103
N +A +C+ ++ H+KY+KK +T P
Sbjct: 311 NLDAKKACAGALKLHKKYLKKVQTKKP 337
>12_02_0738 +
22669557-22669756,22669868-22669916,22670620-22670657,
22670977-22671058,22671146-22671195,22671381-22671847,
22671992-22672155,22672242-22672448,22672554-22672710,
22672858-22672965,22673161-22673234,22673364-22673521,
22673728-22673788,22673858-22673965
Length = 640
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 338 PQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNV 436
P+P PTS G S S H +P + + G N+
Sbjct: 447 PEPISPTSAAAAGPSNRSDHQMPNQGTIGAENL 479
>11_06_0368 + 22756988-22758205
Length = 405
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 518 PICPMPPAIRNKKRAAMASVV-NMAPGSYASWSFRSPVP 631
P+C P I +K AA A+ N APG+ A+ +P P
Sbjct: 261 PLCRAPVQISDKSAAAAAAAAANAAPGAAAAVPGGAPAP 299
>10_08_1037 - 22477358-22478752
Length = 464
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 302 EIPGPSQH-IFHQPQPQKPTSMEQPG 376
+IP P+ + FH+P P +P M PG
Sbjct: 291 QIPNPNHNPAFHRPPPPQPMPMPMPG 316
>04_04_1695 + 35433975-35437040
Length = 1021
Score = 28.3 bits (60), Expect = 6.8
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 5/100 (5%)
Frame = +2
Query: 308 PGPSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMA 487
P P+ H HQ QP + S EQP P P + + Q P P
Sbjct: 142 PAPAVH-HHQHQPPQSVSAEQP--DSRPPPAFPHGEA--------QAQAQPPPPESESKG 190
Query: 488 STSKDNMGP-----VPICPMPPAIRNKKRAAMASVVNMAP 592
T+ D+ P VP+ PA +RA + +V P
Sbjct: 191 KTTHDHEPPRVFRSVPVQAPAPAASQPRRATLHAVAAPPP 230
>01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159
Length = 400
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/74 (28%), Positives = 28/74 (37%)
Frame = +2
Query: 314 PSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMAST 493
PS H P P P + G +G + PGR L++A G M+S
Sbjct: 110 PSPHRLLPPAPGSPAVNGEDGAAGTAQGRRPGRPQ---LHLATGRLFRTPSQGSLAMSSP 166
Query: 494 SKDNMGPVPICPMP 535
S P P+ P P
Sbjct: 167 SPSPTPPSPLTPAP 180
>01_01_0326 - 2642408-2643607
Length = 399
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 732 NSLPSMCGAVQLGPIFVSISVSWRVLYVLQTVLV 631
NSLP + GAV GPIF+ +S + +++ +V
Sbjct: 252 NSLPFVRGAVPHGPIFLGLSRAKKIITAYNITVV 285
>10_07_0028 +
12019827-12020000,12020083-12020505,12020583-12020642,
12020709-12020822,12020903-12020908
Length = 258
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 320 QHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAY 442
QHIFHQP T + P V + + P R S G ++ Y
Sbjct: 37 QHIFHQPASMYMTDL-FPDVVPQTTESSPHRKSNSGRDIEY 76
>04_04_1405 - 33305948-33309676,33309749-33310468,33310533-33311439,
33334405-33334484
Length = 1811
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/75 (22%), Positives = 26/75 (34%)
Frame = +2
Query: 353 PTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVPICPM 532
P E P + PH P + +Q P +G +GP+P CP
Sbjct: 979 PDPQEGPEATAGRPHLTPFGPEANPVLTRPGRKQGEEAPEPNGGLRPLTTGVGPLPACPT 1038
Query: 533 PPAIRNKKRAAMASV 577
P + + A+V
Sbjct: 1039 TPGAPDPQDGPEATV 1053
>02_05_0936 -
32875479-32875573,32875794-32876028,32877752-32877848,
32878863-32878927,32879506-32879571,32879735-32879842,
32880169-32880303,32880582-32880647,32881172-32881222,
32881312-32881386,32881834-32881896,32882694-32882783,
32882903-32883100,32883189-32883315,32883482-32884100,
32884228-32884265,32884651-32884718,32885056-32885100,
32885243-32885302,32885510-32885593,32885677-32885868,
32887361-32887663
Length = 959
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 192 ALGTITDTCRAQCPARAV*ILYRLYDRLHSLRF 290
+L ++ + QCPAR + + D LH LRF
Sbjct: 518 SLQVVSQYYQLQCPARGSSLTFHPLDHLHPLRF 550
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +2
Query: 518 PICPMPPAIRNKKRAAMASVVNMAPGSYASWSFRSPVPTRTVCNTYRTRHETEMETKIGP 697
P+ P PP RN+ +A A + PG+ + P P + T + P
Sbjct: 187 PLPPQPPPPRNQAQADKAPIPVAPPGAAVPPAQPQPQPPQAGAEAVTTESTEATQAANPP 246
Query: 698 SCTA--PH 715
+ TA PH
Sbjct: 247 ATTASNPH 254
>01_01_0889 + 7008077-7009261
Length = 394
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +2
Query: 440 YEMQQDPNKPGVSGMASTSKDNMGPVPICPMPPA----IRNKKRAAMAS 574
Y ++ NKP ST+ P P P PP IR K+RAA AS
Sbjct: 255 YTKKKKRNKPKKKS-PSTASSKAAPPPPPPPPPTTRHQIRRKRRAARAS 302
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,330,060
Number of Sequences: 37544
Number of extensions: 563380
Number of successful extensions: 1879
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1873
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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