BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5607
(744 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118689-1|AAM50549.1| 893|Drosophila melanogaster AT15637p pro... 34 0.18
AE013599-3102|AAM68188.1| 889|Drosophila melanogaster CG10543-P... 34 0.18
AE013599-3101|AAO41340.1| 1024|Drosophila melanogaster CG10543-P... 34 0.18
AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-P... 34 0.18
AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain ... 31 1.7
AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC... 31 1.7
AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB... 31 1.7
AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA... 31 1.7
X83466-1|CAA58469.1| 421|Drosophila melanogaster aurora protein. 31 2.2
X83465-1|CAA58468.1| 421|Drosophila melanogaster aurora protein. 31 2.2
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro... 31 2.2
AY051891-1|AAK93315.1| 561|Drosophila melanogaster LD37788p pro... 31 2.2
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 31 2.2
AE014297-4170|AAF56741.1| 761|Drosophila melanogaster CG12878-P... 31 2.2
AE014297-4169|AAN14126.2| 782|Drosophila melanogaster CG12878-P... 31 2.2
X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protei... 30 2.9
M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein ( D.me... 30 2.9
AY128478-1|AAM75071.1| 950|Drosophila melanogaster RE42104p pro... 30 2.9
AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA... 30 2.9
AY061229-1|AAL28777.1| 411|Drosophila melanogaster LD16949p pro... 30 3.8
AF072823-1|AAC69620.1| 413|Drosophila melanogaster unpaired pro... 30 3.8
AE014297-1411|AAF54723.1| 411|Drosophila melanogaster CG3068-PA... 30 3.8
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein. 29 5.1
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 29 5.1
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 29 5.1
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 29 5.1
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 29 5.1
AY094943-1|AAM11296.1| 469|Drosophila melanogaster RH56938p pro... 29 8.8
AE014297-3098|AAF55956.1| 444|Drosophila melanogaster CG13407-P... 29 8.8
AE014296-3283|AAF49064.2| 1029|Drosophila melanogaster CG7323-PA... 29 8.8
>AY118689-1|AAM50549.1| 893|Drosophila melanogaster AT15637p
protein.
Length = 893
Score = 34.3 bits (75), Expect = 0.18
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 458 PNKPGVSGMASTSKDNMGPVPICPMPPAIRNKKRAAMASVVNMAPGSYAS 607
P K G TS+++MG +P P PP ++ K+AA + A + A+
Sbjct: 236 PPKKGKQRFPKTSEEDMGSLPDMPGPPPVKASKKAATSKAKAQAAAAAAA 285
>AE013599-3102|AAM68188.1| 889|Drosophila melanogaster CG10543-PB,
isoform B protein.
Length = 889
Score = 34.3 bits (75), Expect = 0.18
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 458 PNKPGVSGMASTSKDNMGPVPICPMPPAIRNKKRAAMASVVNMAPGSYAS 607
P K G TS+++MG +P P PP ++ K+AA + A + A+
Sbjct: 236 PPKKGKQRFPKTSEEDMGSLPDMPGPPPVKASKKAATSKAKAQAAAAAAA 285
>AE013599-3101|AAO41340.1| 1024|Drosophila melanogaster CG10543-PC,
isoform C protein.
Length = 1024
Score = 34.3 bits (75), Expect = 0.18
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 458 PNKPGVSGMASTSKDNMGPVPICPMPPAIRNKKRAAMASVVNMAPGSYAS 607
P K G TS+++MG +P P PP ++ K+AA + A + A+
Sbjct: 371 PPKKGKQRFPKTSEEDMGSLPDMPGPPPVKASKKAATSKAKAQAAAAAAA 420
>AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-PA,
isoform A protein.
Length = 1634
Score = 34.3 bits (75), Expect = 0.18
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 458 PNKPGVSGMASTSKDNMGPVPICPMPPAIRNKKRAAMASVVNMAPGSYAS 607
P K G TS+++MG +P P PP ++ K+AA + A + A+
Sbjct: 981 PPKKGKQRFPKTSEEDMGSLPDMPGPPPVKASKKAATSKAKAQAAAAAAA 1030
>AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain
protein SMRTER protein.
Length = 3469
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 335 QPQPQK-PTSMEQPGVSGHSPHTVPGRSSWGG 427
+P+PQ S+++P GHSPHT G SS G
Sbjct: 2103 EPEPQTLDLSIKKPPRDGHSPHTGAGGSSSSG 2134
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 305 IPGPSQHIFHQPQPQKPTSMEQPGVSGHSPHT 400
IP PSQH H P P S H HT
Sbjct: 2066 IPPPSQHSVHPAHPSHTQHPAHPQHSSHGQHT 2097
>AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC,
isoform C protein.
Length = 3604
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 335 QPQPQK-PTSMEQPGVSGHSPHTVPGRSSWGG 427
+P+PQ S+++P GHSPHT G SS G
Sbjct: 2238 EPEPQTLDLSIKKPPRDGHSPHTGAGGSSSSG 2269
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 305 IPGPSQHIFHQPQPQKPTSMEQPGVSGHSPHT 400
IP PSQH H P P S H HT
Sbjct: 2201 IPPPSQHSVHPAHPSHTQHPAHPQHSSHGQHT 2232
>AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB,
isoform B protein.
Length = 3604
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 335 QPQPQK-PTSMEQPGVSGHSPHTVPGRSSWGG 427
+P+PQ S+++P GHSPHT G SS G
Sbjct: 2238 EPEPQTLDLSIKKPPRDGHSPHTGAGGSSSSG 2269
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 305 IPGPSQHIFHQPQPQKPTSMEQPGVSGHSPHT 400
IP PSQH H P P S H HT
Sbjct: 2201 IPPPSQHSVHPAHPSHTQHPAHPQHSSHGQHT 2232
>AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA,
isoform A protein.
Length = 3604
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 335 QPQPQK-PTSMEQPGVSGHSPHTVPGRSSWGG 427
+P+PQ S+++P GHSPHT G SS G
Sbjct: 2238 EPEPQTLDLSIKKPPRDGHSPHTGAGGSSSSG 2269
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 305 IPGPSQHIFHQPQPQKPTSMEQPGVSGHSPHT 400
IP PSQH H P P S H HT
Sbjct: 2201 IPPPSQHSVHPAHPSHTQHPAHPQHSSHGQHT 2232
>X83466-1|CAA58469.1| 421|Drosophila melanogaster aurora protein.
Length = 421
Score = 30.7 bits (66), Expect = 2.2
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Frame = +2
Query: 335 QPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGP 514
+P P ++ + + P T PG G ++A + KP V + T+ + P
Sbjct: 49 KPLPGSSGALIRSAATTVRPATKPGLG--GSNSIASSEGNNFQKPMVPSVKKTTSEFAAP 106
Query: 515 VPICPM--PPAIRNKKRAAMASVVNMAPGSYASWSFRSPVPTRT 640
P+ P+ P ++ +K A +S + G+ +S + + T T
Sbjct: 107 APVAPIKKPESLSKQKPTAASSESSKELGAASSSAEKEKTKTET 150
>X83465-1|CAA58468.1| 421|Drosophila melanogaster aurora protein.
Length = 421
Score = 30.7 bits (66), Expect = 2.2
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Frame = +2
Query: 335 QPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGP 514
+P P ++ + + P T PG G ++A + KP V + T+ + P
Sbjct: 49 KPLPGSSGALIRSAATTVRPATKPGLG--GSNSIASSEGNNFQKPMVPSVKKTTSEFAAP 106
Query: 515 VPICPM--PPAIRNKKRAAMASVVNMAPGSYASWSFRSPVPTRT 640
P+ P+ P ++ +K A +S + G+ +S + + T T
Sbjct: 107 APVAPIKKPESLSKQKPTAASSESSKELGAASSSAEKEKTKTET 150
>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
protein.
Length = 1153
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Frame = +2
Query: 212 HLPSPMPG--PSGLNPVSTIRXXXXXXXXXXXEIPGPSQHIFHQPQPQK--PTSMEQPGV 379
H+PSP G P G++P + I P P HQP P P S++
Sbjct: 149 HMPSPAGGGLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPTSLHQPTPTSAGPPSLQHGLH 208
Query: 380 SGHSPHTVPGRSS 418
GH + SS
Sbjct: 209 PGHQHSQLSAASS 221
>AY051891-1|AAK93315.1| 561|Drosophila melanogaster LD37788p
protein.
Length = 561
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +2
Query: 314 PSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMAST 493
P Q HQ QPQ+ QP SP T S+ + + DP+ G M S
Sbjct: 209 PQQQPHHQQQPQQ---QRQPSQPQQSPQTPLSTSNLSQRLQQVQQRNDPSHVGSVQMHSL 265
Query: 494 SKDNMGP 514
+ N P
Sbjct: 266 ASQNQAP 272
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Frame = +2
Query: 212 HLPSPMPG--PSGLNPVSTIRXXXXXXXXXXXEIPGPSQHIFHQPQPQK--PTSMEQPGV 379
H+PSP G P G++P + I P P HQP P P S++
Sbjct: 981 HMPSPAGGGLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPTSLHQPTPTSAGPPSLQHGLH 1040
Query: 380 SGHSPHTVPGRSS 418
GH + SS
Sbjct: 1041 PGHQHSQLSAASS 1053
>AE014297-4170|AAF56741.1| 761|Drosophila melanogaster CG12878-PA,
isoform A protein.
Length = 761
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +2
Query: 314 PSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMAST 493
P Q HQ QPQ+ QP SP T S+ + + DP+ G M S
Sbjct: 409 PQQQPHHQQQPQQ---QRQPSQPQQSPQTPLSTSNLSQRLQQVQQRNDPSHVGSVQMHSL 465
Query: 494 SKDNMGP 514
+ N P
Sbjct: 466 ASQNQAP 472
>AE014297-4169|AAN14126.2| 782|Drosophila melanogaster CG12878-PB,
isoform B protein.
Length = 782
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +2
Query: 314 PSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMAST 493
P Q HQ QPQ+ QP SP T S+ + + DP+ G M S
Sbjct: 430 PQQQPHHQQQPQQ---QRQPSQPQQSPQTPLSTSNLSQRLQQVQQRNDPSHVGSVQMHSL 486
Query: 494 SKDNMGP 514
+ N P
Sbjct: 487 ASQNQAP 493
>X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protein
protein.
Length = 1408
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 405 GTVCGECPETPGCSIEVGFCGCG*WKICCD 316
G +C EC PGC + G C WK CD
Sbjct: 313 GPLCNECMVYPGC--KHGSCNGSAWKCVCD 340
>M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein (
D.melanogaster serrate(Ser) mRNA, complete cds. ).
Length = 1404
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 405 GTVCGECPETPGCSIEVGFCGCG*WKICCD 316
G +C EC PGC + G C WK CD
Sbjct: 309 GPLCNECMVYPGC--KHGSCNGSAWKCVCD 336
>AY128478-1|AAM75071.1| 950|Drosophila melanogaster RE42104p
protein.
Length = 950
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 405 GTVCGECPETPGCSIEVGFCGCG*WKICCD 316
G +C EC PGC + G C WK CD
Sbjct: 86 GPLCNECMVYPGC--KHGSCNGSAWKCVCD 113
>AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA
protein.
Length = 1407
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 405 GTVCGECPETPGCSIEVGFCGCG*WKICCD 316
G +C EC PGC + G C WK CD
Sbjct: 312 GPLCNECMVYPGC--KHGSCNGSAWKCVCD 339
>AY061229-1|AAL28777.1| 411|Drosophila melanogaster LD16949p
protein.
Length = 411
Score = 29.9 bits (64), Expect = 3.8
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Frame = +2
Query: 353 PTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVPICPM 532
P S PG SG PG G ++A + KP V + T+ + P P+ P+
Sbjct: 46 PASKPLPGSSGALIRK-PGLG--GSNSIASSEGNNFQKPMVPSVKKTTSEFAAPAPVAPI 102
Query: 533 --PPAIRNKKRAAMASVVNMAPGSYASWSFRSPVPTRT 640
P ++ +K A +S + G+ +S + + T T
Sbjct: 103 KKPESLSKQKPTAASSESSKELGAASSSAEKEKTKTET 140
>AF072823-1|AAC69620.1| 413|Drosophila melanogaster unpaired
protein protein.
Length = 413
Score = 29.9 bits (64), Expect = 3.8
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 392 PHTVPGRS--SWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVPICPMPPAIRNKKR 559
PH GRS S GGL V + ++ P + S AS N G +P P R++KR
Sbjct: 22 PHLAEGRSTTSSGGLTVI-DSERLPIRT-TSSTASAQHPNQGTIPASAASPRKRHRKR 77
>AE014297-1411|AAF54723.1| 411|Drosophila melanogaster CG3068-PA
protein.
Length = 411
Score = 29.9 bits (64), Expect = 3.8
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Frame = +2
Query: 353 PTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVPICPM 532
P S PG SG PG G ++A + KP V + T+ + P P+ P+
Sbjct: 46 PASKPLPGSSGALIRK-PGLG--GSNSIASSEGNNFQKPMVPSVKKTTSEFAAPAPVAPI 102
Query: 533 --PPAIRNKKRAAMASVVNMAPGSYASWSFRSPVPTRT 640
P ++ +K A +S + G+ +S + + T T
Sbjct: 103 KKPESLSKQKPTAASSESSKELGAASSSAEKEKTKTET 140
>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
Length = 1966
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +2
Query: 212 HLPSPMPG--PSGLNPVSTIRXXXXXXXXXXXEIPGPSQHIFHQPQPQK--PTSMEQPGV 379
H+PSP G P G++P + I P P HQP P P S++
Sbjct: 981 HMPSPAGGGLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPTSLHQPTPTSAGPPSLQHGLH 1040
Query: 380 SGH 388
GH
Sbjct: 1041 PGH 1043
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +2
Query: 212 HLPSPMPG--PSGLNPVSTIRXXXXXXXXXXXEIPGPSQHIFHQPQPQK--PTSMEQPGV 379
H+PSP G P G++P + I P P HQP P P S++
Sbjct: 981 HMPSPAGGGLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPTSLHQPTPTSAGPPSLQHGLH 1040
Query: 380 SGH 388
GH
Sbjct: 1041 PGH 1043
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +2
Query: 212 HLPSPMPG--PSGLNPVSTIRXXXXXXXXXXXEIPGPSQHIFHQPQPQK--PTSMEQPGV 379
H+PSP G P G++P + I P P HQP P P S++
Sbjct: 981 HMPSPAGGGLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPTSLHQPTPTSAGPPSLQHGLH 1040
Query: 380 SGH 388
GH
Sbjct: 1041 PGH 1043
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +2
Query: 212 HLPSPMPG--PSGLNPVSTIRXXXXXXXXXXXEIPGPSQHIFHQPQPQK--PTSMEQPGV 379
H+PSP G P G++P + I P P HQP P P S++
Sbjct: 981 HMPSPAGGGLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPTSLHQPTPTSAGPPSLQHGLH 1040
Query: 380 SGH 388
GH
Sbjct: 1041 PGH 1043
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +2
Query: 212 HLPSPMPG--PSGLNPVSTIRXXXXXXXXXXXEIPGPSQHIFHQPQPQK--PTSMEQPGV 379
H+PSP G P G++P + I P P HQP P P S++
Sbjct: 981 HMPSPAGGGLPPGMHPQNLIHGPPPGAAGGSGPQPPPPPTSLHQPTPTSAGPPSLQHGLH 1040
Query: 380 SGH 388
GH
Sbjct: 1041 PGH 1043
>AY094943-1|AAM11296.1| 469|Drosophila melanogaster RH56938p
protein.
Length = 469
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +2
Query: 341 QPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVP 520
QP P ++ H HTVP R G+ + + P + + S + N +P
Sbjct: 345 QPMNHLGQSLPNLNMHHSHTVPLRR---GMAFSTSTKNPPLRK-TRNITSQNSINWHQIP 400
Query: 521 ICPMPPAIRNK 553
P PP+ R++
Sbjct: 401 ATPTPPSPRSQ 411
>AE014297-3098|AAF55956.1| 444|Drosophila melanogaster CG13407-PA
protein.
Length = 444
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 407 GRSSWGGL--NVAYEMQQDPNKPGVSGMASTSKDNMGPVPICPMPPA 541
G S +GG+ +V YE+Q DP S +S + P PPA
Sbjct: 87 GHSGYGGIEPSVEYELQHDPPSGSFSSFHPSSAGSGPAYPSAHHPPA 133
>AE014296-3283|AAF49064.2| 1029|Drosophila melanogaster CG7323-PA
protein.
Length = 1029
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +2
Query: 341 QPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVP 520
QP P ++ H HTVP R G+ + + P + + S + N +P
Sbjct: 905 QPMNHLGQSLPNLNMHHSHTVPLRR---GMAFSTSTKNPPLRK-TRNITSQNSINWHQIP 960
Query: 521 ICPMPPAIRNK 553
P PP+ R++
Sbjct: 961 ATPTPPSPRSQ 971
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,782,250
Number of Sequences: 53049
Number of extensions: 934106
Number of successful extensions: 3428
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3402
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -