Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5607
(744 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 35 0.053
AF025464-2|AAN84804.1| 496|Caenorhabditis elegans Prion-like-(q... 31 0.86
AF025464-1|AAN84805.1| 529|Caenorhabditis elegans Prion-like-(q... 31 0.86
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical pr... 30 1.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 2.6
U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer ... 29 2.6
U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer ... 29 2.6
U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer ... 29 2.6
AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein. 29 2.6
U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical p... 29 3.5
U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical p... 29 3.5
L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical pr... 29 3.5
L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 29 3.5
Z68319-4|CAA92702.1| 884|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical ... 29 4.6
AF002196-2|AAP68956.1| 915|Caenorhabditis elegans Hypothetical ... 29 4.6
AF002196-1|AAP68955.1| 913|Caenorhabditis elegans Hypothetical ... 29 4.6
AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical ... 29 4.6
Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical p... 28 6.1
Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 8.0
AF036706-14|AAK39276.2| 390|Caenorhabditis elegans Kinase, glh-... 28 8.0
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 35.1 bits (77), Expect = 0.053
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 311 GPSQHIFHQPQ-PQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMA 487
GPS P P +P+ +PG +G + + P + G N DPNKPG +G
Sbjct: 1119 GPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNGP----SDPNKPGPNGPN 1174
Query: 488 STSKDNMGPVPICPMPPAIRNK 553
+S N P P P P+ NK
Sbjct: 1175 ESSDPNK-PGPNGPNEPSDPNK 1195
Score = 34.7 bits (76), Expect = 0.070
Identities = 36/110 (32%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Frame = +2
Query: 230 PGPSGLNPVSTIRXXXXXXXXXXXEIPGPSQHIFHQPQPQKPTSMEQPGVSGHSPH-TVP 406
PGPSG N S + P PS + P P P S P +G SP+ P
Sbjct: 977 PGPSGPNGPSDPNKPSPNGPSDPVK-PSPSGPSPNGPSPNGP-SPNGPSPNGPSPNGPTP 1034
Query: 407 GRSSWGGLNV-AYEMQQDPNKPGVSGMASTSKDNMGPVPICPMPPAIRNK 553
S G + DPNKPG +G S N P P P P+ NK
Sbjct: 1035 NWPSPNGPSPNGPNGPSDPNKPGPNGPNGPSDPNK-PGPNGPNEPSDPNK 1083
Score = 34.7 bits (76), Expect = 0.070
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 311 GPSQHIFHQPQ-PQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMA 487
GPS P P +P+ +PG +G + + P + G N DPNKPG +G
Sbjct: 1063 GPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEP----SDPNKPGPNGPN 1118
Query: 488 STSKDNMGPVPICPMPPAIRNK 553
S N P P P P+ NK
Sbjct: 1119 GPSDPNK-PGPNGPNEPSDPNK 1139
Score = 34.3 bits (75), Expect = 0.093
Identities = 23/70 (32%), Positives = 32/70 (45%)
Frame = +2
Query: 344 PQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVPI 523
P +P+ +PG +G + + P + G N DPNKPG +G S N P P
Sbjct: 1187 PNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEP----SDPNKPGPNGSNGPSDPNK-PGPN 1241
Query: 524 CPMPPAIRNK 553
P P+ NK
Sbjct: 1242 GPNGPSDPNK 1251
Score = 33.9 bits (74), Expect = 0.12
Identities = 33/113 (29%), Positives = 41/113 (36%), Gaps = 1/113 (0%)
Frame = +2
Query: 218 PSPM-PGPSGLNPVSTIRXXXXXXXXXXXEIPGPSQHIFHQPQPQKPTSMEQPGVSGHSP 394
PSP P P+G +P P P+ + P P P P G +
Sbjct: 1002 PSPSGPSPNGPSPNGP-SPNGPSPNGPSPNGPTPNWPSPNGPSPNGPNGPSDPNKPGPNG 1060
Query: 395 HTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVPICPMPPAIRNK 553
P + G N E DPNKPG +G S N P P P P+ NK
Sbjct: 1061 PNGPSDPNKPGPNGPNE-PSDPNKPGPNGPNGPSDPNK-PGPNGPNEPSDPNK 1111
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +2
Query: 311 GPSQHIFHQPQ-PQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMA 487
GPS P P P+ +PG +G + + P R G N DPNKPG +G
Sbjct: 1231 GPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNRPGPNGPNGPL----DPNKPGPNGPN 1286
Query: 488 STSKDNMGPVPICPMPPAIRNK 553
S N P P P P+ NK
Sbjct: 1287 GPSDPNK-PGPNGPNGPSDPNK 1307
Score = 33.5 bits (73), Expect = 0.16
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +2
Query: 311 GPSQHIFHQPQ-PQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMA 487
GPS P P +P+ +PG +G + + P + G N DPNKPG +G
Sbjct: 1203 GPSDPNKPGPNGPNEPSDPNKPGPNGSNGPSDPNKPGPNGPNGP----SDPNKPGPNGPN 1258
Query: 488 STSKDNMGPVPICPMPPAIRNK 553
S N P P P P NK
Sbjct: 1259 EPSDPNR-PGPNGPNGPLDPNK 1279
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +2
Query: 344 PQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVPI 523
P + +PG +G S +VP S+ GG + +P+ P + G ++ + GP P
Sbjct: 1369 PNGSSDPNKPGPNGPSNPSVPESSTGGGPSPG-PSPNEPSNPSILGPSTGGDPSPGPSPN 1427
Query: 524 CPMPPAI 544
P P+I
Sbjct: 1428 EPSNPSI 1434
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +2
Query: 344 PQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVPI 523
P P+ +PG +G + + P + G N DPNKPG +G +S N P P
Sbjct: 1327 PNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEP----SDPNKPGPNGPNGSSDPNK-PGPN 1381
Query: 524 CPMPPAI 544
P P++
Sbjct: 1382 GPSNPSV 1388
Score = 31.5 bits (68), Expect = 0.65
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = +2
Query: 344 PQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVPI 523
P P +PG +G + + P + G N DPNKPG +G S N P P
Sbjct: 1271 PNGPLDPNKPGPNGPNGPSDPNKPGPNGPNGP----SDPNKPGPNGPNEPSDPNK-PGPN 1325
Query: 524 CPMPPAIRNK 553
P P+ NK
Sbjct: 1326 GPNGPSDPNK 1335
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/64 (31%), Positives = 26/64 (40%)
Frame = +2
Query: 344 PQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVPI 523
P P+ +PG SG + + P + S G DP KP SG + GP P
Sbjct: 968 PNGPSDPNKPGPSGPNGPSDPNKPSPNG-------PSDPVKPSPSGPSPNGPSPNGPSPN 1020
Query: 524 CPMP 535
P P
Sbjct: 1021 GPSP 1024
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/77 (33%), Positives = 30/77 (38%)
Frame = +2
Query: 308 PGPSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMA 487
PGP P P P+ +P +G SP+ G S DPNKPG SG
Sbjct: 940 PGPGPG---PPSPNGPSDPNKPSPNGPSPNGPNGPS-------------DPNKPGPSGPN 983
Query: 488 STSKDNMGPVPICPMPP 538
S N P P P P
Sbjct: 984 GPSDPNK-PSPNGPSDP 999
>AF025464-2|AAN84804.1| 496|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform a protein.
Length = 496
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +2
Query: 308 PGPSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKP 469
P P+Q P P + T + +P G + T P W Y QQ+PN P
Sbjct: 264 PPPAQQA---PIPTEKTQIPRPPSHGSAWPTFPPHQQWTPQGYPYGYQQNPNSP 314
>AF025464-1|AAN84805.1| 529|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform b protein.
Length = 529
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +2
Query: 308 PGPSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKP 469
P P+Q P P + T + +P G + T P W Y QQ+PN P
Sbjct: 286 PPPAQQA---PIPTEKTQIPRPPSHGSAWPTFPPHQQWTPQGYPYGYQQNPNSP 336
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/81 (27%), Positives = 30/81 (37%)
Frame = +2
Query: 308 PGPSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMA 487
PGP + P P ++GH+P+ P L +A P P + GMA
Sbjct: 473 PGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPL---LGIAPMSTNAPPPPPMPGMA 529
Query: 488 STSKDNMGPVPICPMPPAIRN 550
S P P P P + N
Sbjct: 530 PLSTG--APTPPPPPPVGMAN 548
>Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical
protein F39H11.3 protein.
Length = 588
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/75 (30%), Positives = 26/75 (34%), Gaps = 7/75 (9%)
Frame = +2
Query: 311 GPSQHIFHQPQPQKPTSMEQPGVSGHSPH-------TVPGRSSWGGLNVAYEMQQDPNKP 469
G Q Q P M+QPG SG+ P VPG G +N MQ P
Sbjct: 490 GAPQDYHPQQGPPMVQMMQQPGPSGYYPQRPGQPTGAVPGPGPQGYMNPQMGMQMGMRAP 549
Query: 470 GVSGMASTSKDNMGP 514
GV M P
Sbjct: 550 GVPPQGYMPGRGMAP 564
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 3/84 (3%)
Frame = +2
Query: 308 PGPSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSW---GGLNVAYEMQQDPNKPGVS 478
P P QH HQP P P ++ P + + VPG+ + +E P P
Sbjct: 72 PYPYQHP-HQPPPAHPHHLQHPHPYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPPPRK 130
Query: 479 GMASTSKDNMGPVPICPMPPAIRN 550
A S P P P P R+
Sbjct: 131 SRAGGSSPPPPPPPRVPRTPPPRS 154
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 29.5 bits (63), Expect = 2.6
Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 1/121 (0%)
Frame = +2
Query: 308 PGPSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMA 487
PGP+ Q P + +PG SG +PG S G Q P PG G
Sbjct: 172 PGPAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPSGRPG------PQGPPGAPGQPGSG 225
Query: 488 STSKDNMGPVPICPM-PPAIRNKKRAAMASVVNMAPGSYASWSFRSPVPTRTVCNTYRTR 664
ST P P P P + A + APGS A++ P P R+ +R R
Sbjct: 226 STPGPAGPPGPPGPNGQPGHPGQDGQPGAPGNDGAPGSDAAY---CPCPARSAA-VFRHR 281
Query: 665 H 667
+
Sbjct: 282 N 282
>U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform c protein.
Length = 796
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = +2
Query: 353 PTSMEQPGVSGHS-PHTVPGRSSWGGLNVAYEM-QQDPNKPGVSGMASTSKD-----NMG 511
P S+ P ++ H+ P +P + G A+ + Q P+ PGVS S + NM
Sbjct: 286 PASIRPPPMNMHTRPQPMPQQLPSVGATFAHPLPHQAPHNPGVSHPYSIAPQTHYPLNMN 345
Query: 512 PVPICPMPP 538
P+P P P
Sbjct: 346 PIPQMPQMP 354
>U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform a protein.
Length = 892
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = +2
Query: 353 PTSMEQPGVSGHS-PHTVPGRSSWGGLNVAYEM-QQDPNKPGVSGMASTSKD-----NMG 511
P S+ P ++ H+ P +P + G A+ + Q P+ PGVS S + NM
Sbjct: 382 PASIRPPPMNMHTRPQPMPQQLPSVGATFAHPLPHQAPHNPGVSHPYSIAPQTHYPLNMN 441
Query: 512 PVPICPMPP 538
P+P P P
Sbjct: 442 PIPQMPQMP 450
>U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform b protein.
Length = 864
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = +2
Query: 353 PTSMEQPGVSGHS-PHTVPGRSSWGGLNVAYEM-QQDPNKPGVSGMASTSKD-----NMG 511
P S+ P ++ H+ P +P + G A+ + Q P+ PGVS S + NM
Sbjct: 354 PASIRPPPMNMHTRPQPMPQQLPSVGATFAHPLPHQAPHNPGVSHPYSIAPQTHYPLNMN 413
Query: 512 PVPICPMPP 538
P+P P P
Sbjct: 414 PIPQMPQMP 422
>AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein.
Length = 796
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = +2
Query: 353 PTSMEQPGVSGHS-PHTVPGRSSWGGLNVAYEM-QQDPNKPGVSGMASTSKD-----NMG 511
P S+ P ++ H+ P +P + G A+ + Q P+ PGVS S + NM
Sbjct: 286 PASIRPPPMNMHTRPQPMPQQLPSVGATFAHPLPHQAPHNPGVSHPYSIAPQTHYPLNMN 345
Query: 512 PVPICPMPP 538
P+P P P
Sbjct: 346 PIPQMPQMP 354
>U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical
protein F01F1.1c protein.
Length = 641
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = +2
Query: 374 GVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVPICPMPPAIRNK 553
G++ + + G++SW +N ++ P+ G G G PI P PP ++
Sbjct: 33 GLNASNGNNNTGQNSW--MNNSFSFPNPPSAYGQFG-GGFHPSTWGSGPIVPPPPPQQSA 89
Query: 554 KRAAMASVVNMAPGSYA 604
A + N A +YA
Sbjct: 90 VNATAQAAYNQASFNYA 106
>U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical
protein F01F1.1a protein.
Length = 646
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = +2
Query: 374 GVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVPICPMPPAIRNK 553
G++ + + G++SW +N ++ P+ G G G PI P PP ++
Sbjct: 38 GLNASNGNNNTGQNSW--MNNSFSFPNPPSAYGQFG-GGFHPSTWGSGPIVPPPPPQQSA 94
Query: 554 KRAAMASVVNMAPGSYA 604
A + N A +YA
Sbjct: 95 VNATAQAAYNQASFNYA 111
>L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical
protein F42H10.7b protein.
Length = 531
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +2
Query: 341 QPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGP 514
+P PG + T PG SSW + Q P PG+ M DN+GP
Sbjct: 465 RPSSSKRSTTPGSAWSRGSTTPG-SSWS------QGAQTPGTPGIESMIRRKGDNVGP 515
>L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical
protein F42H10.7a protein.
Length = 529
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +2
Query: 341 QPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGP 514
+P PG + T PG SSW + Q P PG+ M DN+GP
Sbjct: 463 RPSSSKRSTTPGSAWSRGSTTPG-SSWS------QGAQTPGTPGIESMIRRKGDNVGP 513
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 29.1 bits (62), Expect = 3.5
Identities = 29/107 (27%), Positives = 35/107 (32%), Gaps = 1/107 (0%)
Frame = +2
Query: 218 PSPMPGPSGLNPVSTIRXXXXXXXXXXXEIPGPSQHIFHQPQPQKPTSME-QPGVSGHSP 394
P+ PGPSG P S ++PG P P P QPG +GH+
Sbjct: 208 PAGPPGPSG-QPGSNGNAGAPGAPGHVVDVPGTPGPA-GPPGPAGPAGAPGQPGQAGHAQ 265
Query: 395 HTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVPICPMP 535
PG G A +PG G G CP P
Sbjct: 266 PGQPGPQGDAGAPGAPGQPGSAGQPGNDG----GDGGQGACDHCPPP 308
>Z68319-4|CAA92702.1| 884|Caenorhabditis elegans Hypothetical
protein T23G7.4 protein.
Length = 884
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 6 TYRAAVIGRRGPRVLQKC-KNMKSTSK 83
TYRA ++GR + LQ+C KNM++T +
Sbjct: 835 TYRAGLVGRFDNQRLQQCLKNMRTTMR 861
>AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical
protein C09D4.4c protein.
Length = 916
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 305 IPGPSQHIFHQ--PQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVS 478
IP ++ F P P + T+ E P S + S +G + A E+ QD P +S
Sbjct: 465 IPNSQENNFSPEFPGPSRDTATESPSCSSEPIASPSPSSEFGRCSAAGELFQDDGIPLIS 524
Query: 479 GMASTSKD 502
+ TS++
Sbjct: 525 KESVTSEE 532
>AF002196-2|AAP68956.1| 915|Caenorhabditis elegans Hypothetical
protein C09D4.4b protein.
Length = 915
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 305 IPGPSQHIFHQ--PQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVS 478
IP ++ F P P + T+ E P S + S +G + A E+ QD P +S
Sbjct: 464 IPNSQENNFSPEFPGPSRDTATESPSCSSEPIASPSPSSEFGRCSAAGELFQDDGIPLIS 523
Query: 479 GMASTSKD 502
+ TS++
Sbjct: 524 KESVTSEE 531
>AF002196-1|AAP68955.1| 913|Caenorhabditis elegans Hypothetical
protein C09D4.4a protein.
Length = 913
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 305 IPGPSQHIFHQ--PQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVS 478
IP ++ F P P + T+ E P S + S +G + A E+ QD P +S
Sbjct: 462 IPNSQENNFSPEFPGPSRDTATESPSCSSEPIASPSPSSEFGRCSAAGELFQDDGIPLIS 521
Query: 479 GMASTSKD 502
+ TS++
Sbjct: 522 KESVTSEE 529
>AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical
protein Y42H9AR.1 protein.
Length = 506
Score = 28.7 bits (61), Expect = 4.6
Identities = 28/117 (23%), Positives = 37/117 (31%), Gaps = 4/117 (3%)
Frame = +2
Query: 200 YHHRHLPSPMPGP-SGLNPVSTIRXXXXXXXXXXXEIPGPSQHIFHQPQPQKPTSME--Q 370
+ H H PSP P P S PV + Q +QP PTS + Q
Sbjct: 329 HSHEHSPSPAPAPVSSPTPVQQYQQSYSQAQPPVDYYQQQQQQQAYQPPVNPPTSYQAYQ 388
Query: 371 PGV-SGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVPICPMPP 538
P V + + P S+ G Y S ++ M P PP
Sbjct: 389 PPVPTSYYPPAASTASNSSGYQAPYYSPPSYPTQQQSSYVPSAVPPMFSATSAPTPP 445
>Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 308 PGPSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMA 487
P P++H PQ + P VSG + + VP R + A+ ++ P +G+
Sbjct: 275 PPPNRHPNEPPQDDENIYDHIPDVSGGNIYEVPSRDHYDFPPDAFN-EEPPKTNPTTGVI 333
Query: 488 STSKDNMGPVPICP 529
+ K +PI P
Sbjct: 334 NLPKIGPNGLPIYP 347
>Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 308 PGPSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMA 487
P P++H PQ + P VSG + + VP R + A+ ++ P +G+
Sbjct: 275 PPPNRHPNEPPQDDENIYDHIPDVSGGNIYEVPSRDHYDFPPDAFN-EEPPKTNPTTGVI 333
Query: 488 STSKDNMGPVPICP 529
+ K +PI P
Sbjct: 334 NLPKIGPNGLPIYP 347
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = +2
Query: 308 PG-PSQHIFHQPQ--PQKPTSMEQPGVSGHSPHTVPGRSSWGG 427
PG P Q H P P KP S PG GHS PG+ G
Sbjct: 181 PGQPGQPGPHGPNGHPGKPGSQGPPGPPGHSDEPKPGQPGQPG 223
>AF036706-14|AAK39276.2| 390|Caenorhabditis elegans Kinase,
glh-binding protein 1 protein.
Length = 390
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 255 YRLYDRLHSLRFRFN-LKFLVHRSIFSISHNHKSQLLWNSLASQGI 389
+ L++ +H LR L F V++S+ +I H H S ++ L I
Sbjct: 125 HNLHEVIHRLRLDHKTLSFFVYQSLCAIKHLHNSGVIHRDLKPSNI 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,577,546
Number of Sequences: 27780
Number of extensions: 446079
Number of successful extensions: 1681
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1659
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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