Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5606
(372 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006676-2|AAK71382.3| 439|Caenorhabditis elegans Hypothetical ... 29 1.1
Z46266-16|CAD44094.1| 1088|Caenorhabditis elegans Hypothetical p... 29 1.4
Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical p... 29 1.4
Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical p... 29 1.4
Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical p... 29 1.4
Z46266-11|CAA86417.1| 1170|Caenorhabditis elegans Hypothetical p... 29 1.4
Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical p... 29 1.4
Z37979-7|CAD44150.1| 1088|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z37979-2|CAA86035.1| 1170|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical pr... 29 1.4
AB011281-1|BAA24961.1| 254|Caenorhabditis elegans GAP-2-5 protein. 29 1.4
AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein. 29 1.4
AB011279-1|BAA24959.1| 594|Caenorhabditis elegans GAP-2-3 protein. 29 1.4
AB011278-1|BAA24958.1| 280|Caenorhabditis elegans GAP-2-2 protein. 29 1.4
AB011277-1|BAA24957.1| 269|Caenorhabditis elegans GAP-2-1 protein. 29 1.4
U88178-7|ABA03111.1| 439|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z32679-4|CAA83591.1| 315|Caenorhabditis elegans Hypothetical pr... 27 5.7
U61954-6|AAK29811.2| 459|Caenorhabditis elegans Sand endocytosi... 27 5.7
AL021447-4|CAB60285.3| 330|Caenorhabditis elegans Hypothetical ... 27 5.7
Z78198-5|CAB01571.1| 437|Caenorhabditis elegans Hypothetical pr... 26 7.5
>AC006676-2|AAK71382.3| 439|Caenorhabditis elegans Hypothetical
protein M04F3.3 protein.
Length = 439
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 157 DDQ*PLYLKFVLVEFGESIVNDNTGNRTNLT-RLIHLIAL-TIYNMSNKSSSRNISTKIK 330
DD+ ++ + + GE +V + +G LT R + A T+Y++SNKS+ + + KI+
Sbjct: 5 DDKPDRQVESIRLNIGEEVVEEKSGKLAWLTIRELGRGAFGTVYHVSNKSTKQEAALKIE 64
>Z46266-16|CAD44094.1| 1088|Caenorhabditis elegans Hypothetical
protein ZK899.8h protein.
Length = 1088
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 63 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 94
>Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical
protein ZK899.8e protein.
Length = 1048
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 43 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 74
>Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical
protein ZK899.8d protein.
Length = 1137
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 112 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 143
>Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical
protein ZK899.8c protein.
Length = 1259
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 234 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 265
>Z46266-11|CAA86417.1| 1170|Caenorhabditis elegans Hypothetical
protein ZK899.8b protein.
Length = 1170
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 145 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 176
>Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 202 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 233
>Z37979-7|CAD44150.1| 1088|Caenorhabditis elegans Hypothetical
protein ZK899.8h protein.
Length = 1088
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 63 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 94
>Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical
protein ZK899.8e protein.
Length = 1048
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 43 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 74
>Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical
protein ZK899.8d protein.
Length = 1137
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 112 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 143
>Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical
protein ZK899.8c protein.
Length = 1259
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 234 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 265
>Z37979-2|CAA86035.1| 1170|Caenorhabditis elegans Hypothetical
protein ZK899.8b protein.
Length = 1170
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 145 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 176
>Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 202 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 233
>Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 202 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 233
>AB011281-1|BAA24961.1| 254|Caenorhabditis elegans GAP-2-5 protein.
Length = 254
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 43 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 74
>AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein.
Length = 1120
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 112 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 143
>AB011279-1|BAA24959.1| 594|Caenorhabditis elegans GAP-2-3 protein.
Length = 594
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 234 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 265
>AB011278-1|BAA24958.1| 280|Caenorhabditis elegans GAP-2-2 protein.
Length = 280
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 145 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 176
>AB011277-1|BAA24957.1| 269|Caenorhabditis elegans GAP-2-1 protein.
Length = 269
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 223 NTGNRTNLTRLIHLIALTIYNMSNKSSSRNISTKI 327
+TGNRT LT +H + N SSS N+ST++
Sbjct: 202 STGNRTTLTASVH---NNLMNGRMSSSSHNLSTRL 233
>U88178-7|ABA03111.1| 439|Caenorhabditis elegans Hypothetical
protein W09C3.1 protein.
Length = 439
Score = 27.5 bits (58), Expect = 3.2
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 157 DDQ*PLYLKFVLVEFGESIVNDNTGNRTNLT-RLIHLIAL-TIYNMSNKSSSRNISTKIK 330
DD+ ++ + + GE +V + G LT R + A T+Y++SNKS+ + + KI+
Sbjct: 5 DDKPDRQVESIRLNIGEEVVEEKGGKIAWLTIRELGRGAFGTVYHVSNKSTKQEAALKIE 64
>Z32679-4|CAA83591.1| 315|Caenorhabditis elegans Hypothetical
protein C05B5.4 protein.
Length = 315
Score = 26.6 bits (56), Expect = 5.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 253 LIHLIALTIYNMSNKSSSRNISTKIK 330
L +I L++Y S KSS RN+S ++
Sbjct: 228 LAFIIMLSVYLKSKKSSRRNVSVNVQ 253
>U61954-6|AAK29811.2| 459|Caenorhabditis elegans Sand endocytosis
protein familyprotein 1 protein.
Length = 459
Score = 26.6 bits (56), Expect = 5.7
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 124 DMERFGIIFYSDDQ*PLYLKFVLVEFGESIVNDNTGNRTNLTRLIHLI 267
+++ +IF +Q P + F+L EFG+ I +N N + L+ LI
Sbjct: 33 NLKNADVIFEHLEQLPFQV-FILSEFGKPIFVNNDRNEGEIVSLVALI 79
>AL021447-4|CAB60285.3| 330|Caenorhabditis elegans Hypothetical
protein F19B2.8 protein.
Length = 330
Score = 26.6 bits (56), Expect = 5.7
Identities = 9/38 (23%), Positives = 21/38 (55%)
Frame = +1
Query: 172 LYLKFVLVEFGESIVNDNTGNRTNLTRLIHLIALTIYN 285
LY + +FG S++ + + T + + + +I + IY+
Sbjct: 83 LYFLYYYNDFGPSLIEEGNSDITTIPQFLFIICILIYS 120
>Z78198-5|CAB01571.1| 437|Caenorhabditis elegans Hypothetical
protein F55C5.6 protein.
Length = 437
Score = 26.2 bits (55), Expect = 7.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 222 IVHNRFTELYKYEFQIQWS 166
IV + ++YK +FQI+WS
Sbjct: 169 IVFEKMLKIYKNQFQIEWS 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,727,981
Number of Sequences: 27780
Number of extensions: 145577
Number of successful extensions: 285
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 285
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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