Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5605
         (434 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070551-1|AAL48022.1|  340|Drosophila melanogaster LD28119p pro...    27   8.3  
AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA...    27   8.3  
AE014297-1592|AAF54874.2|  655|Drosophila melanogaster CG7340-PA...    27   8.3  
AE014297-1313|AAF54653.1|  340|Drosophila melanogaster CG10898-P...    27   8.3  

>AY070551-1|AAL48022.1|  340|Drosophila melanogaster LD28119p
           protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 8/38 (21%), Positives = 23/38 (60%)
 Frame = -3

Query: 168 RIYVVDVYGLQSPLNNRWAVSSSTHQSNKKKKNSGLCL 55
           R ++++++G + P +    + S  H +++++   G+CL
Sbjct: 254 RKFMIEIFGAELPQHRPHGLLSVEHSASEQENTDGICL 291


>AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA
            protein.
          Length = 1542

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 149  TSTT*MRHPP*DTSSKVSSIVTTAAPPFKPKRIRR 253
            TSTT   HPP  T S V ++ TT AP    K  +R
Sbjct: 1459 TSTTSTTHPPGVTKSDV-TLATTKAPAISTKPTQR 1492


>AE014297-1592|AAF54874.2|  655|Drosophila melanogaster CG7340-PA,
           isoform A protein.
          Length = 655

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 312 QEQCFSESTTGSETRPTEKIRRMRFGLK 229
           Q++C S+S+T    R +EK++ M  G K
Sbjct: 51  QKRCLSKSSTSRHRRQSEKLKHMGCGRK 78


>AE014297-1313|AAF54653.1|  340|Drosophila melanogaster CG10898-PA
           protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 8/38 (21%), Positives = 23/38 (60%)
 Frame = -3

Query: 168 RIYVVDVYGLQSPLNNRWAVSSSTHQSNKKKKNSGLCL 55
           R ++++++G + P +    + S  H +++++   G+CL
Sbjct: 254 RKFMIEIFGAELPQHRPHGLLSVEHSASEQENTDGICL 291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,594,758
Number of Sequences: 53049
Number of extensions: 339987
Number of successful extensions: 816
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)