Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5604
(426 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0893 + 22327485-22327671,22327756-22328627 39 0.001
01_06_0339 + 28549449-28549529,28549768-28549914,28550027-285500... 37 0.006
03_06_0366 + 33408671-33408745,33409342-33409398,33410398-334104... 37 0.008
01_03_0220 - 13905808-13905831,13906694-13906885,13906960-139075... 37 0.008
05_02_0083 + 6450694-6450766,6451391-6451560,6451633-6451704,645... 36 0.018
02_05_1246 - 35226759-35226860,35227521-35227715,35227804-352283... 36 0.018
02_02_0075 - 6572385-6572558,6573416-6573607,6574553-6574630,657... 35 0.024
10_07_0165 + 13740611-13740706,13741159-13741215,13741523-137416... 34 0.042
06_03_0542 + 21959533-21959785,21960732-21960846,21962815-219629... 34 0.042
03_01_0473 - 3639533-3639598,3639848-3639955,3640037-3640126,364... 34 0.042
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482... 31 0.39
12_02_1128 - 26341118-26341204,26341302-26341441,26341567-263416... 31 0.51
05_01_0319 + 2503963-2504176,2504316-2504376,2504691-2504769,250... 31 0.51
10_07_0196 + 13978647-13979142,13979242-13980542 28 2.7
10_08_0510 + 18430580-18431781,18433176-18433554 27 4.8
10_08_0139 + 15145310-15145622,15145820-15145881,15145975-151463... 27 4.8
09_06_0144 + 21149338-21150651 27 4.8
08_01_0890 - 8761787-8761910,8761987-8762063,8762163-8762310,876... 27 4.8
02_05_0756 - 31534011-31534141,31534235-31535338,31535448-315356... 27 4.8
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 27 4.8
03_02_0918 + 12381662-12383118,12383249-12384707 27 6.3
06_01_0860 - 6514921-6515034,6515125-6515196,6515344-6515400,651... 27 8.3
>08_02_0893 + 22327485-22327671,22327756-22328627
Length = 352
Score = 39.1 bits (87), Expect = 0.001
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +3
Query: 285 RIEENAALRIIQDGATLLRSEKTMIEIDSPVTVCGDVHGQF 407
++ E ++ G + S+ ++E+++P+ VCGD+HGQF
Sbjct: 29 QLSEAEIRQLCVTGKDIFLSQPNLLELEAPINVCGDIHGQF 69
>01_06_0339 +
28549449-28549529,28549768-28549914,28550027-28550094,
28550771-28550828,28551474-28551584,28551668-28551718,
28552308-28552451,28552570-28552665,28552781-28552852,
28553392-28553475
Length = 303
Score = 37.1 bits (82), Expect = 0.006
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 333 LLRSEKTMIEIDSPVTVCGDVHGQF 407
+L E + ++SPVTVCGD+HGQF
Sbjct: 31 ILIEESNVQPVNSPVTVCGDIHGQF 55
>03_06_0366 +
33408671-33408745,33409342-33409398,33410398-33410481,
33410575-33410646,33410768-33410839,33411011-33411051,
33411517-33411583,33411673-33411864,33411947-33412036,
33412111-33412218,33412513-33412578
Length = 307
Score = 36.7 bits (81), Expect = 0.008
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 333 LLRSEKTMIEIDSPVTVCGDVHGQF 407
+L E + + SPVT+CGD+HGQF
Sbjct: 36 ILMEESNVQPVKSPVTICGDIHGQF 60
>01_03_0220 -
13905808-13905831,13906694-13906885,13906960-13907519,
13910007-13910187
Length = 318
Score = 36.7 bits (81), Expect = 0.008
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +3
Query: 285 RIEENAALRIIQDGATLLRSEKTMIEIDSPVTVCGDVHGQFL 410
++ E ++ + +L S+ ++ I +PV +CGD+HGQF+
Sbjct: 27 QLSEAEIRQLCVEAKRVLLSQPNLLRIHAPVKICGDIHGQFV 68
>05_02_0083 +
6450694-6450766,6451391-6451560,6451633-6451704,
6451893-6452043,6452709-6452817,6452906-6453023,
6453214-6453361,6453520-6453768,6454209-6454334,
6454474-6454574,6454728-6454802,6455160-6455219
Length = 483
Score = 35.5 bits (78), Expect = 0.018
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Frame = +3
Query: 288 IEENAALRIIQDGATLLRSEKTMIEIDSP----VTVCGDVHGQF 407
I + A +I+ LLRS ++++++ P TVCGDVHGQ+
Sbjct: 189 IHKRYAYQIVLQTVQLLRSVPSLVDVNVPDGSHFTVCGDVHGQY 232
>02_05_1246 -
35226759-35226860,35227521-35227715,35227804-35228363,
35229299-35229476
Length = 344
Score = 35.5 bits (78), Expect = 0.018
Identities = 10/41 (24%), Positives = 26/41 (63%)
Frame = +3
Query: 285 RIEENAALRIIQDGATLLRSEKTMIEIDSPVTVCGDVHGQF 407
++ E+ ++ + ++ ++E+++P+ +CGDVHGQ+
Sbjct: 26 QLSESEIKQLCATSKEIFLNQPNLLELEAPIKICGDVHGQY 66
>02_02_0075 -
6572385-6572558,6573416-6573607,6574553-6574630,
6574712-6574820,6575442-6575556,6576280-6576535
Length = 307
Score = 35.1 bits (77), Expect = 0.024
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 288 IEENAALRIIQDGATLLRSEKTMIEIDSPVTVCGDVHGQF 407
+ E + + +L E + + PVTVCGD+HGQF
Sbjct: 21 LAEGEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQF 60
>10_07_0165 +
13740611-13740706,13741159-13741215,13741523-13741681,
13742315-13742398,13742496-13742567,13742810-13742881,
13743085-13743125,13743296-13743362,13744033-13744224,
13744314-13744403,13744742-13744849,13745089-13745154
Length = 367
Score = 34.3 bits (75), Expect = 0.042
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 354 MIEIDSPVTVCGDVHGQF 407
M + SPVT+CGD+HGQF
Sbjct: 103 MKPVKSPVTICGDIHGQF 120
>06_03_0542 +
21959533-21959785,21960732-21960846,21962815-21962923,
21963027-21963104,21964200-21964391,21964995-21965168
Length = 306
Score = 34.3 bits (75), Expect = 0.042
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 312 IIQDGATLLRSEKTMIEIDSPVTVCGDVHGQF 407
+ + +L E + + PVTVCGD+HGQF
Sbjct: 28 LCEQAKAILMEEWNVQPVRCPVTVCGDIHGQF 59
>03_01_0473 -
3639533-3639598,3639848-3639955,3640037-3640126,
3640203-3640394,3640952-3641018,3641472-3641512,
3641762-3641779,3641984-3642055,3642154-3642237,
3642296-3642373,3642703-3642759,3643374-3643469
Length = 322
Score = 34.3 bits (75), Expect = 0.042
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 357 IEIDSPVTVCGDVHGQF 407
+ + SPVT+CGD+HGQF
Sbjct: 77 LPVKSPVTICGDIHGQF 93
>03_05_0488 -
24847076-24847220,24847823-24847872,24848139-24848278,
24848358-24848493,24848584-24848683,24848837-24848949,
24849034-24849132,24849227-24849311,24849799-24850037,
24850202-24850372,24850544-24850784,24850899-24851172,
24851481-24851660,24852170-24852251,24852336-24852437,
24853315-24853384,24853725-24853824,24853931-24854025,
24854105-24854184,24854361-24854439,24854603-24854663,
24855570-24855984
Length = 1018
Score = 31.1 bits (67), Expect = 0.39
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +3
Query: 249 PDVLKQHFILEGRIEENAALRIIQDGATLLRSEKTMIEIDSPVTVCGDVHGQF 407
P V +Q F+ + N + + SE +++++ +PV + GD+HGQF
Sbjct: 663 PPVRRQFFL-----DCNEIADLCDSAERIFSSEPSVLQLKAPVKIFGDLHGQF 710
>12_02_1128 -
26341118-26341204,26341302-26341441,26341567-26341663,
26341755-26341830,26341919-26342118,26342199-26342297,
26342395-26342479,26342786-26343024,26343233-26343403,
26343605-26343848,26343980-26344253,26344755-26344934,
26345342-26345423,26346209-26346278,26346802-26346901,
26347003-26347097,26347181-26347317,26347342-26347420,
26347591-26347651,26348580-26349009
Length = 981
Score = 30.7 bits (66), Expect = 0.51
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 249 PDVLKQHFILEGRIEENAALRIIQDGATLLRSEKTMIEIDSPVTVCGDVHGQF 407
P V +Q F+ + N + + SE +++++ +P+ + GD+HGQF
Sbjct: 654 PPVRRQFFL-----DCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 701
>05_01_0319 +
2503963-2504176,2504316-2504376,2504691-2504769,
2504861-2504940,2505046-2505140,2505748-2505847,
2506647-2506716,2507657-2507758,2507972-2508053,
2508257-2508304,2508841-2509009,2509089-2509314,
2509961-2510131,2510200-2510438,2510600-2510684,
2510778-2510876,2510954-2511153,2511232-2511307,
2511463-2511675,2511763-2511815,2511999-2512151,
2512474-2512606
Length = 915
Score = 30.7 bits (66), Expect = 0.51
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 333 LLRSEKTMIEIDSPVTVCGDVHGQF 407
+ E T++++ +P+ V GD+HGQF
Sbjct: 535 IFMQEPTVLQLKAPIKVFGDLHGQF 559
>10_07_0196 + 13978647-13979142,13979242-13980542
Length = 598
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 376 TGESISIIVFSDRNKVAPS*IIRKAAFSSIRPSRI 272
+G ++ + VF DRN + I +A SS RPS+I
Sbjct: 205 SGSTVPMRVFVDRNSSVKNGFISRANLSSPRPSQI 239
>10_08_0510 + 18430580-18431781,18433176-18433554
Length = 526
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 219 VFDEKTGKPLPDVLKQHFILEGRIEENAALRIIQ 320
VFDE + +PDV + +L G +EN + ++
Sbjct: 39 VFDELLRRGIPDVFSYNILLNGLCDENRSQEALE 72
>10_08_0139 +
15145310-15145622,15145820-15145881,15145975-15146355,
15146413-15146929,15147031-15147161
Length = 467
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 43 DSVLVLYLFCHFENSGVYGLDLVFFM 120
D+ V ++ CHF+ V+G+D VF +
Sbjct: 422 DNPGVWFMHCHFDRHVVWGMDTVFIV 447
>09_06_0144 + 21149338-21150651
Length = 437
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 213 SEVFDEKTGKPLPDVLKQHFILEGRIEENAALRI 314
+++ D KP P++L+ H LEG ++E L++
Sbjct: 102 ADLVDMAPAKPTPELLRLHPDLEGELQEVVLLQL 135
>08_01_0890 -
8761787-8761910,8761987-8762063,8762163-8762310,
8762430-8762490,8764714-8764938,8764990-8765170
Length = 271
Score = 27.5 bits (58), Expect = 4.8
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 132 SGSNDKVSTTQRMIQSVAFPPSHKLTVSEVFDEKTGKPLPDV-LKQHFILEGRIEENAAL 308
+GS+ + + F H + + + D KTGKP PD+ L EG IE + L
Sbjct: 155 TGSHKRHFALKTQNHKEMFTLMHHVVMGDDPDVKTGKPSPDIFLAAMRRFEGNIEPSNCL 214
Query: 309 RIIQDGATLLRSEK 350
+ +D + + + K
Sbjct: 215 -VFEDAPSGVAAAK 227
>02_05_0756 -
31534011-31534141,31534235-31535338,31535448-31535692,
31535789-31535940,31536051-31536158
Length = 579
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 43 DSVLVLYLFCHFENSGVYGLDLVFFM 120
D+ V ++ CHF+ V+G+D VF +
Sbjct: 534 DNPGVWFMHCHFDRHVVWGMDTVFIV 559
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 225 DEKTGKPLPDVLKQHFILEGRIEENAALRIIQDGA 329
+E G + DV+ H +E I E+A L+ +QD +
Sbjct: 1825 EENLGNGIGDVISVHEKIEDNIHESAELKDLQDNS 1859
>03_02_0918 + 12381662-12383118,12383249-12384707
Length = 971
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 244 HYQMY*SNILS*KVGSKKMRPYGLFKMVP 330
HY + SNIL G K+ YGL K++P
Sbjct: 808 HYNLKSSNILLDGSGDAKVGDYGLAKLLP 836
>06_01_0860 -
6514921-6515034,6515125-6515196,6515344-6515400,
6515512-6515650,6515737-6515921,6516043-6516126,
6516552-6516674,6518043-6518219,6518331-6518400,
6518478-6518574,6519022-6519097,6519240-6519329,
6519548-6519655,6520715-6520756,6520854-6521045,
6521239-6521309,6521396-6521550,6521999-6522064,
6522769-6522820,6523476-6523566,6523897-6524094,
6524173-6524267,6524361-6524485,6524586-6525016
Length = 969
Score = 26.6 bits (56), Expect = 8.3
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +3
Query: 105 PSVFYVTNMSGSNDKVSTTQRMIQSV-AFPPSHKLTVSEVFDEKTGKPLPDVLKQHFILE 281
P N++ + S+ +R++ + A PS +S++F K PLP +Q +
Sbjct: 492 PKTLVFHNLARLSPLTSSLKRLVGGLKARKPSKSNDISKLFRNKFFIPLPKDDEQLRVFN 551
Query: 282 GRIEENAALRIIQDGATLLRSEKTMIE 362
+IEE+ +II L+ K + E
Sbjct: 552 NQIEEDR--KIIISRHNLVEMHKVLEE 576
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,419,878
Number of Sequences: 37544
Number of extensions: 255073
Number of successful extensions: 587
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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