Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5602
(767 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0302 - 2361948-2362649,2363422-2363617,2363873-2363997,236... 34 0.015
07_03_0066 - 13011785-13011998,13012570-13012730,13013396-130134... 34 0.11
01_01_1189 + 9454042-9455655 31 1.3
05_02_0003 + 5520331-5520476,5520572-5520644,5520762-5520928,552... 29 3.1
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 29 3.1
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 29 4.1
10_08_0497 - 18336819-18337140,18337226-18337360,18337579-183376... 29 4.1
08_01_0626 - 5445676-5446687,5447099-5447430 29 4.1
10_06_0151 + 11276554-11276916,11277020-11277403 29 5.4
07_03_1692 - 28733184-28733980,28734306-28734373,28734481-287345... 29 5.4
07_03_0605 + 19908541-19909605,19909703-19910092 29 5.4
07_01_0893 + 7484598-7484744,7484837-7484902,7494387-7494530,749... 29 5.4
06_03_0497 + 21424732-21424899,21424992-21425057,21425176-214256... 28 7.1
07_03_0604 + 19903654-19904598 28 9.4
03_02_0870 + 11964135-11964224,11965013-11965175,11965262-119653... 28 9.4
03_02_0239 + 6705279-6705532,6705701-6706025,6706129-6706281,670... 28 9.4
>03_01_0302 -
2361948-2362649,2363422-2363617,2363873-2363997,
2364118-2364180,2364445-2364495,2364597-2364668,
2364779-2364886,2365031-2365135,2365505-2365555,
2365971-2365995,2366234-2366258,2366352-2366439
Length = 536
Score = 33.9 bits (74), Expect(2) = 0.015
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 490 FEIGCGVGNTIFPILQYSQD 549
FE+GCG GNTIFP++ D
Sbjct: 62 FEVGCGAGNTIFPLISTYPD 81
Score = 22.2 bits (45), Expect(2) = 0.015
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 334 RFFKDRHWLFTEF 372
+FFKDRH+L E+
Sbjct: 46 QFFKDRHYLDKEW 58
>07_03_0066 -
13011785-13011998,13012570-13012730,13013396-13013464,
13014228-13014449
Length = 221
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 304 WDAFYDIHQ-NRFFKDRHWLFTEFPELAPDNTSAPV 408
W +F+ H +FFK+R +L EFPEL SA V
Sbjct: 60 WTSFHRRHTCGKFFKERRYLLKEFPELLNSKDSAKV 95
>01_01_1189 + 9454042-9455655
Length = 537
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 109 NSDKRPQFGNRYLENAEEVFKHNSWDNVE--WDEDQEKKAQEKVRNNSQVTFTDEHLKSL 282
+S K +F +A+E + SW+ +E DED++KK + S+ + S+
Sbjct: 468 DSSKESEFSAASPPSAQE--EDLSWEEIEDVGDEDEKKKPIPRSSPPSKAEDIRKRFSSV 525
Query: 283 EEDADKHWD 309
E+D + WD
Sbjct: 526 EDDEELSWD 534
>05_02_0003 +
5520331-5520476,5520572-5520644,5520762-5520928,
5520929-5521223,5521531-5521674,5521756-5521890,
5522004-5522093,5523702-5523809,5523905-5523986,
5525362-5525417,5525888-5525986,5526090-5526394,
5526898-5527075,5527167-5527280,5527376-5527507,
5527614-5527718
Length = 742
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = +1
Query: 91 KKSMVDNSDKRPQFGNRYLENAEEVFKHNSWDNVEWDEDQEKKAQEK---VRNNSQVTFT 261
KK D ++K ++ N Y + V+ +W+ V +ED E A++ RN + +
Sbjct: 603 KKIANDQNNKENEYRNFYFFHRISVYFLKNWEGVGKEEDYENCARQTFTFARNKKPLHYY 662
Query: 262 DEHLKSLEEDADKHWDAF-YDIHQNRF 339
D L D HW F DI + F
Sbjct: 663 D--LLIFPCLYDNHWFVFTVDIKGHHF 687
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 124 PQFGNRYLENAEEVFKHNSWDNVEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEEDAD 297
P++ ++ E E KH + +DE EKK E+ NS++ +D+ E++AD
Sbjct: 354 PEYAKKFAE--ETWAKHKDAEKAAFDE-AEKKRLEEESANSKIDDSDDDASDDEDEAD 408
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +1
Query: 148 ENAEEVFKHNSWDNVEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEEDADKHWDAFYDIH 327
EN+++ KH + D +E + +K Q K++N VT K +E K D+F++++
Sbjct: 1024 ENSDDYDKHGNGDEIEEGTNPQKYQQRKLQN---VTRKSSSKKRKDE---KRTDSFHELY 1077
Query: 328 QNRFFKDRHWL 360
D +WL
Sbjct: 1078 DEDNGVD-YWL 1087
>10_08_0497 -
18336819-18337140,18337226-18337360,18337579-18337673,
18337759-18337845,18337923-18338129,18338209-18338535,
18338711-18338803,18338861-18339175,18339283-18339792,
18339889-18339960,18341209-18341256,18341427-18341551,
18341640-18341661
Length = 785
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 184 DNVEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEEDADKHWDAFY 318
D EW++ + ++ +EKV + + + LK L+E W F+
Sbjct: 14 DEEEWEDGESEEDEEKVGSRKKAKVHAKQLKRLQEKDWGFWYVFF 58
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/84 (23%), Positives = 39/84 (46%)
Frame = +1
Query: 46 FHKSATVLNLKHLK*KKSMVDNSDKRPQFGNRYLENAEEVFKHNSWDNVEWDEDQEKKAQ 225
F + A ++H + M D+ D + E E+ F + +NV+ DED+ ++ +
Sbjct: 176 FDEDAMESEMEHEMEHEMMHDDDDDEEEEEEE--EEEEDEFLYED-ENVDDDEDEGEEDE 232
Query: 226 EKVRNNSQVTFTDEHLKSLEEDAD 297
E + + D+ + +EED D
Sbjct: 233 EIEEDEDENNDDDDEEEEMEEDED 256
>10_06_0151 + 11276554-11276916,11277020-11277403
Length = 248
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +1
Query: 304 WDAFYDIHQNRFFKDRHWLFTEFPELAPDNTSAPVRV 414
WDAF + +N F D H LF E L P V
Sbjct: 179 WDAFTTLARNYFLVDDHPLFPEIRRLISQAEVTPAEV 215
>07_03_1692 -
28733184-28733980,28734306-28734373,28734481-28734594,
28734835-28734884,28735012-28735422,28735534-28735610,
28736083-28736257,28736843-28736939,28737070-28737833,
28737900-28738001,28738093-28738174,28739004-28739161
Length = 964
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 271 LKSLEEDADKHWDAFYDIHQNRFFKDRHWLFTEFPELAPDNTS 399
L+S++ AD H + YD H N D WL T+ PD S
Sbjct: 520 LQSIKGAADLHTSSIYDHHVNSADGDVSWLKTDKFGSRPDEGS 562
>07_03_0605 + 19908541-19909605,19909703-19910092
Length = 484
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +1
Query: 304 WDAFYDIHQNRFFKDRHWLFTEFPELAPDNTSAPVRVFSETTNHANKQNTTLS 462
WDAF + N F D H LF E L + P V SE + + LS
Sbjct: 410 WDAFKTLAHNYFLVDDHPLFPEIRALLAGVEATPAEV-SEMLLRSEDADAALS 461
>07_01_0893 +
7484598-7484744,7484837-7484902,7494387-7494530,
7494860-7495235,7495904-7496017,7496282-7496454,
7496562-7496669,7497311-7497377,7497791-7497904,
7498121-7498257,7498727-7498813,7498962-7498986,
7499044-7499266,7499770-7499947,7500039-7500152,
7500249-7500380,7500488-7500588,7500720-7500933
Length = 839
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Frame = +1
Query: 91 KKSMVDNSDKRPQFGNRYLENAEEVFKHNSWDNVEWDEDQEKKAQEK---VRNNSQVTFT 261
KK D ++K ++ N Y + V+ +W+ +ED E A++ RN + +
Sbjct: 630 KKIANDQNNKENEYMNFYFFHRSSVYFLKNWEGAGKEEDYENCARQAFTLARNKKPLHYY 689
Query: 262 DEHLKSLEEDADKHWDAF-YDIHQNRF 339
D L D HW F DI + F
Sbjct: 690 D--LLIFPCLYDNHWFVFTVDIKGHHF 714
>06_03_0497 + 21424732-21424899,21424992-21425057,21425176-21425634,
21425945-21426088,21426172-21426306,21426418-21426808,
21427256-21427428,21427508-21427615,21427715-21427810,
21427896-21428003,21428644-21428792,21428924-21428925,
21429071-21429207,21429538-21429842,21430922-21431099,
21431192-21431305,21431373-21431504,21431610-21431843
Length = 1032
Score = 28.3 bits (60), Expect = 7.1
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Frame = +1
Query: 91 KKSMVDNSDKRPQFGNRYLENAEEVFKHNSWDNVEWDEDQEKKAQEK---VRNNSQVTFT 261
KK D ++K ++ N Y + V+ +W+ +ED E A++ RN + +
Sbjct: 850 KKIANDQNNKENEYRNFYFFHRTSVYFLKNWEGAGKEEDYENCARQAFTFARNKKPLHYY 909
Query: 262 DEHLKSLEEDADKHWDAF-YDIHQNRF 339
D L D HW F DI + F
Sbjct: 910 D--LLIFPCLYDNHWFVFTVDIMGHHF 934
>07_03_0604 + 19903654-19904598
Length = 314
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 304 WDAFYDIHQNRFFKDRHWLFTEFPELAPDNTSAPVRV 414
W+AF + N F D H LF E +L + P V
Sbjct: 241 WEAFKTLAHNYFLVDDHPLFPEIRQLLAGVEATPAEV 277
>03_02_0870 + 11964135-11964224,11965013-11965175,11965262-11965380,
11965971-11966083,11966179-11966234,11966320-11966417,
11966588-11966725,11966820-11967125,11967208-11967471,
11967587-11967754,11967838-11968056,11968115-11968158,
11968761-11968830,11968949-11969110,11969672-11969779,
11969873-11969910,11970121-11970265,11970800-11970926,
11971037-11971230,11971529-11971659,11972014-11972089,
11972218-11972328,11972465-11972647,11973264-11973407,
11973946-11973969,11974555-11974728,11974808-11975155,
11975232-11975561,11975776-11975961,11976052-11977026,
11977145-11977399
Length = 1852
Score = 27.9 bits (59), Expect = 9.4
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -3
Query: 546 LTVLQYWENCVSNTTTYFKYVTNCIT 469
+T+++ W+ ++ T +FK + CIT
Sbjct: 1013 MTLIKAWQQSIARTRLFFKLLEECIT 1038
>03_02_0239 +
6705279-6705532,6705701-6706025,6706129-6706281,
6709095-6709346,6709495-6709587,6710380-6710458,
6710556-6710662,6711550-6711795
Length = 502
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 643 FVLDATGG*LECTFSRKIQ*ILGGWIFGLAAIGPPKEGLR 762
++L G EC++ R I ILG W L +G P +R
Sbjct: 110 YILQNEGRLFECSYPRSIGGILGKWSM-LVLVGDPHREMR 148
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,839,999
Number of Sequences: 37544
Number of extensions: 402919
Number of successful extensions: 1170
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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