BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5602
(767 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-313|AAF47532.2| 302|Drosophila melanogaster CG13929-PA... 165 4e-41
AY051875-1|AAK93299.1| 325|Drosophila melanogaster LD36863p pro... 149 4e-36
AE014296-314|AAF47531.2| 325|Drosophila melanogaster CG13929-PB... 149 4e-36
BT001686-1|AAN71441.1| 315|Drosophila melanogaster RE58223p pro... 29 9.3
AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA ... 29 9.3
AE014297-246|AAF52032.1| 308|Drosophila melanogaster CG2663-PA,... 29 9.3
AE014297-245|AAN13281.1| 315|Drosophila melanogaster CG2663-PB,... 29 9.3
>AE014296-313|AAF47532.2| 302|Drosophila melanogaster CG13929-PA,
isoform A protein.
Length = 302
Score = 165 bits (402), Expect = 4e-41
Identities = 95/213 (44%), Positives = 122/213 (57%)
Frame = +1
Query: 112 SDKRPQFGNRYLENAEEVFKHNSWDNVEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEED 291
++KRPQFG R L +A++VFKHN+WD+V+WDE+QE A+ V NS E + + D
Sbjct: 9 NEKRPQFGTRLLTDADDVFKHNAWDHVQWDEEQELAAKAAVAKNSTSKMEAEQKERFQTD 68
Query: 292 ADKHWDAFYDIHQNRFFKDRHWLFTEFPELAPDNTSAPVRVFSETTNHANKQNTTLSSTS 471
A K WD+FY IH NRFFKDRHWLFTEFPELAP +A V
Sbjct: 69 APKFWDSFYGIHDNRFFKDRHWLFTEFPELAP--LAADSAVLQP---------------- 110
Query: 472 DTIRNIFEIGCGVGNTIFPILQYSQDPKLFGIWL*FLI*SY*NNETK*ALHTDRCKVFVL 651
R+IFE+GCGVGNTI P+LQYS +P+L F + ++ RC+VFV+
Sbjct: 111 ---RSIFELGCGVGNTILPLLQYSSEPQLKVFGCDFSARAIEILRSQRQFDEKRCEVFVM 167
Query: 652 DATGG*LECTFSRKIQ*ILGGWIFGLAAIGPPK 750
DAT + F Q I+ IF L+AI P K
Sbjct: 168 DATLDHWQVPFEENSQDII-VMIFVLSAIEPKK 199
>AY051875-1|AAK93299.1| 325|Drosophila melanogaster LD36863p
protein.
Length = 325
Score = 149 bits (361), Expect = 4e-36
Identities = 91/212 (42%), Positives = 117/212 (55%), Gaps = 1/212 (0%)
Frame = +1
Query: 118 KRPQ-FGNRYLENAEEVFKHNSWDNVEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEEDA 294
K+P G+R L +A EVF+ N+WD+V+WDE+QE A+ V NS E + + DA
Sbjct: 33 KKPSGAGSRVLTDAREVFEFNAWDHVQWDEEQELAAKAAVAKNSTSKMEAEQKERFQTDA 92
Query: 295 DKHWDAFYDIHQNRFFKDRHWLFTEFPELAPDNTSAPVRVFSETTNHANKQNTTLSSTSD 474
K WD+FY IH NRFFKDRHWLFTEFPELAP +A V
Sbjct: 93 PKFWDSFYGIHDNRFFKDRHWLFTEFPELAP--LAADSAVLQP----------------- 133
Query: 475 TIRNIFEIGCGVGNTIFPILQYSQDPKLFGIWL*FLI*SY*NNETK*ALHTDRCKVFVLD 654
R+IFE+GCGVGNTI P+LQYS +P+L F + ++ RC+VFV+D
Sbjct: 134 --RSIFELGCGVGNTILPLLQYSSEPQLKVFGCDFSARAIEILRSQRQFDEKRCEVFVMD 191
Query: 655 ATGG*LECTFSRKIQ*ILGGWIFGLAAIGPPK 750
AT + F Q I+ IF L+AI P K
Sbjct: 192 ATLDHWQVPFEENSQDII-VMIFVLSAIEPKK 222
>AE014296-314|AAF47531.2| 325|Drosophila melanogaster CG13929-PB,
isoform B protein.
Length = 325
Score = 149 bits (361), Expect = 4e-36
Identities = 91/212 (42%), Positives = 117/212 (55%), Gaps = 1/212 (0%)
Frame = +1
Query: 118 KRPQ-FGNRYLENAEEVFKHNSWDNVEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEEDA 294
K+P G+R L +A EVF+ N+WD+V+WDE+QE A+ V NS E + + DA
Sbjct: 33 KKPSGAGSRVLTDAREVFEFNAWDHVQWDEEQELAAKAAVAKNSTSKMEAEQKERFQTDA 92
Query: 295 DKHWDAFYDIHQNRFFKDRHWLFTEFPELAPDNTSAPVRVFSETTNHANKQNTTLSSTSD 474
K WD+FY IH NRFFKDRHWLFTEFPELAP +A V
Sbjct: 93 PKFWDSFYGIHDNRFFKDRHWLFTEFPELAP--LAADSAVLQP----------------- 133
Query: 475 TIRNIFEIGCGVGNTIFPILQYSQDPKLFGIWL*FLI*SY*NNETK*ALHTDRCKVFVLD 654
R+IFE+GCGVGNTI P+LQYS +P+L F + ++ RC+VFV+D
Sbjct: 134 --RSIFELGCGVGNTILPLLQYSSEPQLKVFGCDFSARAIEILRSQRQFDEKRCEVFVMD 191
Query: 655 ATGG*LECTFSRKIQ*ILGGWIFGLAAIGPPK 750
AT + F Q I+ IF L+AI P K
Sbjct: 192 ATLDHWQVPFEENSQDII-VMIFVLSAIEPKK 222
>BT001686-1|AAN71441.1| 315|Drosophila melanogaster RE58223p
protein.
Length = 315
Score = 28.7 bits (61), Expect = 9.3
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Frame = +1
Query: 136 NRYLENAEEVFKHNSW------DNVEWDEDQE-KKAQEKVRNNSQVTFTD 264
N Y A V + N W DN +W +DQE KKA E +R + T D
Sbjct: 252 NEYGGKAGGVVELNQWWKQKLVDNTQWFKDQEDKKANESLRPGAPKTSDD 301
>AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA
protein.
Length = 3166
Score = 28.7 bits (61), Expect = 9.3
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 97 SMVDNSDKRPQFGN--RYLENAEEVFKHNSWDNVEWDEDQEKKAQEKVRNNSQVTFTDEH 270
S V +S ++G+ RYL + +E H EW++DQ ++ Q + E
Sbjct: 262 SKVVSSSSTVEYGDEPRYLLDNQEK-PHKQHQTREWEQDQRRQEQRIQEQRQEQQIRQEQ 320
Query: 271 LKSLEE 288
L+ EE
Sbjct: 321 LQRQEE 326
>AE014297-246|AAF52032.1| 308|Drosophila melanogaster CG2663-PA,
isoform A protein.
Length = 308
Score = 28.7 bits (61), Expect = 9.3
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Frame = +1
Query: 136 NRYLENAEEVFKHNSW------DNVEWDEDQE-KKAQEKVRNNSQVTFTD 264
N Y A V + N W DN +W +DQE KKA E +R + T D
Sbjct: 245 NEYGGKAGGVVELNQWWKQKLVDNTQWFKDQEDKKANESLRPGAPKTSDD 294
>AE014297-245|AAN13281.1| 315|Drosophila melanogaster CG2663-PB,
isoform B protein.
Length = 315
Score = 28.7 bits (61), Expect = 9.3
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Frame = +1
Query: 136 NRYLENAEEVFKHNSW------DNVEWDEDQE-KKAQEKVRNNSQVTFTD 264
N Y A V + N W DN +W +DQE KKA E +R + T D
Sbjct: 252 NEYGGKAGGVVELNQWWKQKLVDNTQWFKDQEDKKANESLRPGAPKTSDD 301
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,212,107
Number of Sequences: 53049
Number of extensions: 731486
Number of successful extensions: 2327
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2310
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -