Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5599
         (475 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0044 - 12807372-12807555,12807782-12807840,12807943-128080...    28   4.4  
04_04_0576 + 26346611-26346637,26346758-26346883,26347161-263472...    27   7.7  

>12_02_0044 -
           12807372-12807555,12807782-12807840,12807943-12808072,
           12808160-12808224,12808318-12808506,12808574-12809119,
           12809258-12809497,12809598-12810032
          Length = 615

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 301 LANPVYLKILIVHNYR*MLSQFILRIKKHCFAVGA*QAKIPK 426
           LA+ +Y K +I+++Y   L  F  R+K+    V A    +PK
Sbjct: 494 LADDLYKKPVIIYDYPKQLKPFYARLKEDLKTVSAFDLVVPK 535


>04_04_0576 +
           26346611-26346637,26346758-26346883,26347161-26347295,
           26348162-26348332
          Length = 152

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 309 SCLLKNTDST*LSLNVKSIYIANKKTLFCSRCV 407
           SC LK+T+   +S N + I+    K   C +CV
Sbjct: 41  SCFLKSTEEEKISDNFQLIWAFRLKPCHCRKCV 73


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,206,661
Number of Sequences: 37544
Number of extensions: 167507
Number of successful extensions: 213
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)