Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5599
         (475 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016449-6|AAG23999.1|  331|Caenorhabditis elegans Seven tm rece...    29   1.3  
Z34799-1|CAA84315.1|  147|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U53340-1|AAA96206.1|  658|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AL021487-12|CAA16358.2|  324|Caenorhabditis elegans Hypothetical...    27   9.1  
AC087078-5|AAK66024.2|  191|Caenorhabditis elegans Hypothetical ...    27   9.1  

>AF016449-6|AAG23999.1|  331|Caenorhabditis elegans Seven tm
           receptor protein 40 protein.
          Length = 331

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -1

Query: 433 IFFWVFLLVTHRLQNNVFLFAI*IDLTFSDNYVLSVFLSKQDLQV 299
           I  WV   ++H + N + +F +     +SD Y+ + F  + DL++
Sbjct: 133 IMAWVCYPISHGVVNGLLIFLLASPDEYSDQYLRNEFFKEYDLEI 177


>Z34799-1|CAA84315.1|  147|Caenorhabditis elegans Hypothetical
           protein F34D10.3 protein.
          Length = 147

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -1

Query: 472 IRRHFGFHYTFNNIFFWVFLLVTHRLQNNVFLFAI*IDLTFS 347
           IR  + F Y FNN++   F+ +T ++   VF   I I LTF+
Sbjct: 72  IRAFWNFLYPFNNVYTGQFVCITCKV---VFEVLIAIRLTFA 110


>U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical
           protein T12E12.1 protein.
          Length = 482

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 248 LCSIRYKSKLTYKPN*FIYYIARTPSKNKYQY 153
           L   RY  + TY    F Y+++ TP KN ++Y
Sbjct: 407 LTKCRYTLQYTYP---FAYFLSATPRKNLFEY 435


>U53340-1|AAA96206.1|  658|Caenorhabditis elegans Hypothetical
           protein F02E8.4 protein.
          Length = 658

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 308 FASIXTGFGHSKNAKFRPTYLCSIRYKSKLTY 213
           F S         N K RPT L S++Y S+ TY
Sbjct: 141 FTSYDNRVSDIPNNKLRPTPLYSLQYDSRTTY 172


>AL021487-12|CAA16358.2|  324|Caenorhabditis elegans Hypothetical
           protein Y45F10B.6 protein.
          Length = 324

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = -1

Query: 355 TFSDNYVL-SVFLSKQDLQVFXQVLGTLKMQNLGPHIY-VRLDTNLSSLISRIDLFIT 188
           TF   Y++ +VF+  +  +VF   L   +M++L PH++ V + + L+S++  I  ++T
Sbjct: 31  TFPIIYLVPTVFIIFKVFKVFWGSLFEKRMESLNPHVFLVIVVSQLTSILYMISDYLT 88


>AC087078-5|AAK66024.2|  191|Caenorhabditis elegans Hypothetical
           protein Y34F4.5 protein.
          Length = 191

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -1

Query: 430 FFWVFLLVTHRLQNNVFLFAI*IDLTFSDNYVLSVFLSKQDLQVFXQVL 284
           F W FLL+   +  +  L AI     F+DN   +V+LS Q L +   ++
Sbjct: 102 FKWFFLLIVVLIALSFVLIAIKFQSRFNDN---TVYLSYQSLLLITTII 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,127,171
Number of Sequences: 27780
Number of extensions: 193415
Number of successful extensions: 367
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)