Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5599
         (475 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   3.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   5.1  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   6.7  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   6.7  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   8.9  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   8.9  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   8.9  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 361 QFILRIKKHCFAV 399
           QF+ R + HCFA+
Sbjct: 734 QFLCRYEAHCFAL 746


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 255  GPKFCIFRVPK 287
            GPK C+FR P+
Sbjct: 1611 GPKNCLFRKPE 1621


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 338 CTISIFK*TGFASIXTGFGHS 276
           C   IFK  G   +  GFG S
Sbjct: 162 CLTKIFKADGITGLYRGFGVS 182


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 338 CTISIFK*TGFASIXTGFGHS 276
           C   IFK  G   +  GFG S
Sbjct: 162 CLTKIFKADGITGLYRGFGVS 182


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 407 DKQKYPKKYIIKCIVESK 460
           DKQ+   K +IK +VE+K
Sbjct: 81  DKQREVIKKVIKFLVENK 98


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 407 DKQKYPKKYIIKCIVESK 460
           DKQ+   K +IK +VE+K
Sbjct: 81  DKQREVIKKVIKFLVENK 98


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 407 DKQKYPKKYIIKCIVESK 460
           DKQ+   K +IK +VE+K
Sbjct: 81  DKQREVIKKVIKFLVENK 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,759
Number of Sequences: 438
Number of extensions: 2246
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)