Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5594
         (396 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92804-4|CAB07251.1|  335|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z27079-1|CAA81593.2|  411|Caenorhabditis elegans Hypothetical pr...    27   4.9  
AC024763-9|AAU20836.1|  404|Caenorhabditis elegans Hypothetical ...    27   4.9  
AC024763-8|AAK93863.1|  480|Caenorhabditis elegans Hypothetical ...    27   4.9  
AF100305-6|AAC68915.1|  352|Caenorhabditis elegans Hypothetical ...    27   6.4  
Z75548-2|CAA99910.1|  143|Caenorhabditis elegans Hypothetical pr...    26   8.5  
Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical pr...    26   8.5  

>Z92804-4|CAB07251.1|  335|Caenorhabditis elegans Hypothetical
           protein K05D4.6 protein.
          Length = 335

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 199 QDFAAK*FCSIFHSFMKI*LKFICS 273
           Q+F AK FC  FHS  KI + F+ S
Sbjct: 302 QEFCAKLFCRRFHSKPKIEVNFLNS 326


>Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical
           protein C49F8.1 protein.
          Length = 407

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +1

Query: 31  VSRIGLVFLTAQSFIFYFLGVFSFFTSIC*RILPKLKLFHSCSHQNLLVRQN 186
           V  +   FL+  S  F+F  + SFFT      LP L+L  +  H     R N
Sbjct: 53  VQHMNFSFLSFSSSFFHFFSLHSFFTPP--PFLPFLRLHFAYIHPYFFSRNN 102


>Z27079-1|CAA81593.2|  411|Caenorhabditis elegans Hypothetical
           protein T05G5.1 protein.
          Length = 411

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -1

Query: 105 KEREYPQKIKNETLSRQEHQSYTRNETS 22
           KE+E  ++  +E   RQ+H+ Y + ET+
Sbjct: 123 KEKEDRERASDEERRRQQHEQYWKEETA 150


>AC024763-9|AAU20836.1|  404|Caenorhabditis elegans Hypothetical
           protein Y39A3CL.7b protein.
          Length = 404

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -1

Query: 105 KEREYPQKIKNETLSRQEHQSYTRNETSTAH 13
           K  + PQ++ +E   +Q +QSY ++  STA+
Sbjct: 215 KTAQKPQELMDEQFYQQHYQSYQQSTISTAN 245


>AC024763-8|AAK93863.1|  480|Caenorhabditis elegans Hypothetical
           protein Y39A3CL.7a protein.
          Length = 480

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -1

Query: 105 KEREYPQKIKNETLSRQEHQSYTRNETSTAH 13
           K  + PQ++ +E   +Q +QSY ++  STA+
Sbjct: 291 KTAQKPQELMDEQFYQQHYQSYQQSTISTAN 321


>AF100305-6|AAC68915.1|  352|Caenorhabditis elegans Hypothetical
           protein W04B5.2 protein.
          Length = 352

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 228 NFSLFHENMIKIYLFSILIRFFSMKCFK 311
           NFSL H ++I   LF I+I     KC+K
Sbjct: 210 NFSLRHCDIINFILFIIIIANKYKKCYK 237


>Z75548-2|CAA99910.1|  143|Caenorhabditis elegans Hypothetical
           protein R90.2 protein.
          Length = 143

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 130 PKLKLFHSCSHQNLLVRQNGVASQD 204
           PKL ++H C++  L  ++ G+   D
Sbjct: 86  PKLNIYHKCNYNGLCYKKIGITIPD 110


>Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical
           protein T07C12.6 protein.
          Length = 360

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 49  VFLTAQSFIFYFLGVFSFF-TSIC*RILPKLKLFH 150
           + ++    IFYF   F+F+  S+C ++  K++LFH
Sbjct: 30  IIVSITELIFYF---FAFYINSVCLKVYLKIQLFH 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,159,251
Number of Sequences: 27780
Number of extensions: 136603
Number of successful extensions: 347
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 347
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)