BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5591
(566 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89401-1|CAA61582.1| 160|Homo sapiens ribosomal protein L21 pro... 197 3e-50
U14967-1|AAA85655.1| 160|Homo sapiens ribosomal protein L21 pro... 197 3e-50
CR457032-1|CAG33313.1| 160|Homo sapiens RPL21 protein. 197 3e-50
BC104667-1|AAI04668.1| 160|Homo sapiens ribosomal protein L21 p... 197 3e-50
BC071902-1|AAH71902.1| 160|Homo sapiens ribosomal protein L21 p... 197 3e-50
BC070330-1|AAH70330.1| 160|Homo sapiens ribosomal protein L21 p... 197 3e-50
BC070323-1|AAH70323.1| 160|Homo sapiens ribosomal protein L21 p... 197 3e-50
BC070184-1|AAH70184.1| 160|Homo sapiens ribosomal protein L21 p... 197 3e-50
BC062981-1|AAH62981.1| 160|Homo sapiens ribosomal protein L21 p... 197 3e-50
BC007505-1|AAH07505.1| 160|Homo sapiens ribosomal protein L21 p... 197 3e-50
BC001603-1|AAH01603.1| 160|Homo sapiens ribosomal protein L21 p... 197 3e-50
AL159977-1|CAH73745.1| 160|Homo sapiens ribosomal protein L21 p... 197 3e-50
AB061826-1|BAB79464.1| 160|Homo sapiens ribosomal protein L21 p... 197 3e-50
AB209100-1|BAD92337.1| 163|Homo sapiens ribosomal protein L21 v... 193 3e-49
U25789-1|AAA93231.1| 160|Homo sapiens ribosomal protein L21 pro... 186 5e-47
L38826-1|AAA80462.1| 152|Homo sapiens L21 ribosomal protein pro... 184 1e-46
BC057822-1|AAH57822.1| 136|Homo sapiens similar to 60S ribosoma... 73 5e-13
AK128779-1|BAC87608.1| 172|Homo sapiens protein ( Homo sapiens ... 32 1.6
X06323-1|CAA29639.1| 348|Homo sapiens protein ( Human MRL3 mRNA... 31 2.8
CR456720-1|CAG33001.1| 348|Homo sapiens MRPL3 protein. 31 2.8
BC003375-1|AAH03375.1| 348|Homo sapiens mitochondrial ribosomal... 31 2.8
BC051738-1|AAH51738.1| 696|Homo sapiens SLIT and NTRK-like fami... 30 4.9
AY358289-1|AAQ88656.1| 696|Homo sapiens LLWI233 protein. 30 4.9
AL355481-1|CAC37488.1| 696|Homo sapiens SLIT and NTRK-like fami... 30 4.9
AB067497-1|BAB67803.1| 760|Homo sapiens KIAA1910 protein protein. 30 4.9
BC114950-1|AAI14951.1| 465|Homo sapiens DACH2 protein protein. 30 6.5
AK125861-1|BAC86325.1| 367|Homo sapiens protein ( Homo sapiens ... 30 6.5
AK123780-1|BAC85690.1| 367|Homo sapiens protein ( Homo sapiens ... 30 6.5
AK074159-1|BAB84985.1| 318|Homo sapiens FLJ00232 protein protein. 30 6.5
>X89401-1|CAA61582.1| 160|Homo sapiens ribosomal protein L21
protein.
Length = 160
Score = 197 bits (480), Expect = 3e-50
Identities = 85/123 (69%), Positives = 105/123 (85%)
Frame = +1
Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
MTN+KG RRGTR +F+R FR HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
TGRVYNVT HA+G++VNK+V+G+I+ KRIN+R+EH+KHSK R FLKRVKEN++ KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 550 AAG 558
G
Sbjct: 121 EKG 123
>U14967-1|AAA85655.1| 160|Homo sapiens ribosomal protein L21
protein.
Length = 160
Score = 197 bits (480), Expect = 3e-50
Identities = 85/123 (69%), Positives = 105/123 (85%)
Frame = +1
Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
MTN+KG RRGTR +F+R FR HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
TGRVYNVT HA+G++VNK+V+G+I+ KRIN+R+EH+KHSK R FLKRVKEN++ KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 550 AAG 558
G
Sbjct: 121 EKG 123
>CR457032-1|CAG33313.1| 160|Homo sapiens RPL21 protein.
Length = 160
Score = 197 bits (480), Expect = 3e-50
Identities = 85/123 (69%), Positives = 105/123 (85%)
Frame = +1
Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
MTN+KG RRGTR +F+R FR HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
TGRVYNVT HA+G++VNK+V+G+I+ KRIN+R+EH+KHSK R FLKRVKEN++ KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 550 AAG 558
G
Sbjct: 121 EKG 123
>BC104667-1|AAI04668.1| 160|Homo sapiens ribosomal protein L21
protein.
Length = 160
Score = 197 bits (480), Expect = 3e-50
Identities = 85/123 (69%), Positives = 105/123 (85%)
Frame = +1
Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
MTN+KG RRGTR +F+R FR HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
TGRVYNVT HA+G++VNK+V+G+I+ KRIN+R+EH+KHSK R FLKRVKEN++ KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 550 AAG 558
G
Sbjct: 121 EKG 123
>BC071902-1|AAH71902.1| 160|Homo sapiens ribosomal protein L21
protein.
Length = 160
Score = 197 bits (480), Expect = 3e-50
Identities = 85/123 (69%), Positives = 105/123 (85%)
Frame = +1
Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
MTN+KG RRGTR +F+R FR HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
TGRVYNVT HA+G++VNK+V+G+I+ KRIN+R+EH+KHSK R FLKRVKEN++ KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 550 AAG 558
G
Sbjct: 121 EKG 123
>BC070330-1|AAH70330.1| 160|Homo sapiens ribosomal protein L21
protein.
Length = 160
Score = 197 bits (480), Expect = 3e-50
Identities = 85/123 (69%), Positives = 105/123 (85%)
Frame = +1
Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
MTN+KG RRGTR +F+R FR HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
TGRVYNVT HA+G++VNK+V+G+I+ KRIN+R+EH+KHSK R FLKRVKEN++ KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 550 AAG 558
G
Sbjct: 121 EKG 123
>BC070323-1|AAH70323.1| 160|Homo sapiens ribosomal protein L21
protein.
Length = 160
Score = 197 bits (480), Expect = 3e-50
Identities = 85/123 (69%), Positives = 105/123 (85%)
Frame = +1
Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
MTN+KG RRGTR +F+R FR HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
TGRVYNVT HA+G++VNK+V+G+I+ KRIN+R+EH+KHSK R FLKRVKEN++ KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 550 AAG 558
G
Sbjct: 121 EKG 123
>BC070184-1|AAH70184.1| 160|Homo sapiens ribosomal protein L21
protein.
Length = 160
Score = 197 bits (480), Expect = 3e-50
Identities = 85/123 (69%), Positives = 105/123 (85%)
Frame = +1
Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
MTN+KG RRGTR +F+R FR HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
TGRVYNVT HA+G++VNK+V+G+I+ KRIN+R+EH+KHSK R FLKRVKEN++ KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 550 AAG 558
G
Sbjct: 121 EKG 123
>BC062981-1|AAH62981.1| 160|Homo sapiens ribosomal protein L21
protein.
Length = 160
Score = 197 bits (480), Expect = 3e-50
Identities = 85/123 (69%), Positives = 105/123 (85%)
Frame = +1
Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
MTN+KG RRGTR +F+R FR HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
TGRVYNVT HA+G++VNK+V+G+I+ KRIN+R+EH+KHSK R FLKRVKEN++ KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 550 AAG 558
G
Sbjct: 121 EKG 123
>BC007505-1|AAH07505.1| 160|Homo sapiens ribosomal protein L21
protein.
Length = 160
Score = 197 bits (480), Expect = 3e-50
Identities = 85/123 (69%), Positives = 105/123 (85%)
Frame = +1
Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
MTN+KG RRGTR +F+R FR HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
TGRVYNVT HA+G++VNK+V+G+I+ KRIN+R+EH+KHSK R FLKRVKEN++ KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 550 AAG 558
G
Sbjct: 121 EKG 123
>BC001603-1|AAH01603.1| 160|Homo sapiens ribosomal protein L21
protein.
Length = 160
Score = 197 bits (480), Expect = 3e-50
Identities = 85/123 (69%), Positives = 105/123 (85%)
Frame = +1
Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
MTN+KG RRGTR +F+R FR HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
TGRVYNVT HA+G++VNK+V+G+I+ KRIN+R+EH+KHSK R FLKRVKEN++ KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 550 AAG 558
G
Sbjct: 121 EKG 123
>AL159977-1|CAH73745.1| 160|Homo sapiens ribosomal protein L21
protein.
Length = 160
Score = 197 bits (480), Expect = 3e-50
Identities = 85/123 (69%), Positives = 105/123 (85%)
Frame = +1
Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
MTN+KG RRGTR +F+R FR HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
TGRVYNVT HA+G++VNK+V+G+I+ KRIN+R+EH+KHSK R FLKRVKEN++ KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 550 AAG 558
G
Sbjct: 121 EKG 123
>AB061826-1|BAB79464.1| 160|Homo sapiens ribosomal protein L21
protein.
Length = 160
Score = 197 bits (480), Expect = 3e-50
Identities = 85/123 (69%), Positives = 105/123 (85%)
Frame = +1
Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
MTN+KG RRGTR +F+R FR HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
TGRVYNVT HA+G++VNK+V+G+I+ KRIN+R+EH+KHSK R FLKRVKEN++ KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 550 AAG 558
G
Sbjct: 121 EKG 123
>AB209100-1|BAD92337.1| 163|Homo sapiens ribosomal protein L21
variant protein.
Length = 163
Score = 193 bits (471), Expect = 3e-49
Identities = 84/122 (68%), Positives = 105/122 (86%)
Frame = +1
Query: 184 SKMTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYH 363
+KMTN+KG RRGTR +F+R FR HG +PL+TYM+VYK GDIVDI+G G VQKGMPH YH
Sbjct: 2 AKMTNTKGKRRGTRCMFSRPFRKHGVVPLATYMRVYKKGDIVDIKGMGTVQKGMPHTRYH 61
Query: 364 GKTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKE 543
GKTGRVYNVT HA+G++VNK+V+G+I+ KRIN+R+EH+KHSK + FLKRVKEN++ KE
Sbjct: 62 GKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSQDSFLKRVKENDQKKKE 121
Query: 544 AK 549
AK
Sbjct: 122 AK 123
>U25789-1|AAA93231.1| 160|Homo sapiens ribosomal protein L21
protein.
Length = 160
Score = 186 bits (453), Expect = 5e-47
Identities = 80/123 (65%), Positives = 103/123 (83%)
Frame = +1
Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
MTN+KG RRGTR +F+R FR HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
TGRVYNVT HA G++VN++V+G+I+ KRIN+R+EH+KHSK R +FLKRVK +++ EA+
Sbjct: 61 TGRVYNVTQHAAGIVVNEQVKGKILAKRINVRIEHIKHSKSRDNFLKRVKXDDQEKXEAQ 120
Query: 550 AAG 558
G
Sbjct: 121 EKG 123
>L38826-1|AAA80462.1| 152|Homo sapiens L21 ribosomal protein
protein.
Length = 152
Score = 184 bits (449), Expect = 1e-46
Identities = 79/115 (68%), Positives = 98/115 (85%)
Frame = +1
Query: 214 RGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVT 393
RGTR +F+R FR HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGKTGRVYNVT
Sbjct: 1 RGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVT 60
Query: 394 AHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAG 558
HA+G++VNK+V+G+I+ KRIN+R+EH+KHSK R FLKRVKEN++ KEAK G
Sbjct: 61 QHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKG 115
>BC057822-1|AAH57822.1| 136|Homo sapiens similar to 60S ribosomal
protein L21 protein.
Length = 136
Score = 73.3 bits (172), Expect = 5e-13
Identities = 37/75 (49%), Positives = 50/75 (66%)
Frame = +1
Query: 334 QKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKR 513
+K P V K +VY+V HA+G++VNK G+I+ KRIN+ +EH+KH K R FLK
Sbjct: 28 KKECPTSVTMAKL-KVYSVPQHAVGIVVNK---GKILAKRINVHIEHIKHCKSRDSFLKC 83
Query: 514 VKENERLLKEAKAAG 558
VKEN++ KEAK G
Sbjct: 84 VKENDQKKKEAKEEG 98
>AK128779-1|BAC87608.1| 172|Homo sapiens protein ( Homo sapiens
cDNA FLJ45443 fis, clone BRSSN2012157. ).
Length = 172
Score = 31.9 bits (69), Expect = 1.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 156 SISYTSVYRLEDDELQGLPPRHQGLVRSQVPHTWNYSA 269
S+S+ V + LQ PPR + +PH+WNY++
Sbjct: 70 SVSWAGVRWCDHCSLQSPPPRFEQFSCLSLPHSWNYTS 107
>X06323-1|CAA29639.1| 348|Homo sapiens protein ( Human MRL3 mRNA
for ribosomal protein L3 homologue ( MRL3 = mammalian
ribosome L3 ). ).
Length = 348
Score = 31.1 bits (67), Expect = 2.8
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +1
Query: 163 HILRFTGSKMTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKV----YKVGDIVDIRGNGA 330
H+L++T + N K RFR +I L Y ++ + I +I N A
Sbjct: 128 HVLKYTSKENCNGKMATLSVGGKTVSRFRKATSI-LEFYRELGLPPKQTVKIFNITDNAA 186
Query: 331 VQKGMPHKVYHGKTGRVYNVTAHALG 408
++ G P H + G+ +VTA +G
Sbjct: 187 IKPGTPLYAAHFRPGQYVDVTAKTIG 212
>CR456720-1|CAG33001.1| 348|Homo sapiens MRPL3 protein.
Length = 348
Score = 31.1 bits (67), Expect = 2.8
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +1
Query: 163 HILRFTGSKMTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKV----YKVGDIVDIRGNGA 330
H+L++T + N K RFR +I L Y ++ + I +I N A
Sbjct: 128 HVLKYTSKENCNGKMATLSVGGKTVSRFRKATSI-LEFYRELGLPPKQTVKIFNITDNAA 186
Query: 331 VQKGMPHKVYHGKTGRVYNVTAHALG 408
++ G P H + G+ +VTA +G
Sbjct: 187 IKPGTPLYAAHFRPGQYVDVTAKTIG 212
>BC003375-1|AAH03375.1| 348|Homo sapiens mitochondrial ribosomal
protein L3 protein.
Length = 348
Score = 31.1 bits (67), Expect = 2.8
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +1
Query: 163 HILRFTGSKMTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKV----YKVGDIVDIRGNGA 330
H+L++T + N K RFR +I L Y ++ + I +I N A
Sbjct: 128 HVLKYTSKENCNGKMATLSVGGKTVSRFRKATSI-LEFYRELGLPPKQTVKIFNITDNAA 186
Query: 331 VQKGMPHKVYHGKTGRVYNVTAHALG 408
++ G P H + G+ +VTA +G
Sbjct: 187 IKPGTPLYAAHFRPGQYVDVTAKTIG 212
>BC051738-1|AAH51738.1| 696|Homo sapiens SLIT and NTRK-like family,
member 1 protein.
Length = 696
Score = 30.3 bits (65), Expect = 4.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 327 TIASDVYNVSNFVHFHVRGERNSSMCAEPASEQVPGAAAVTL 202
T+ ++V+ H +RG R ++ E EQ+PG A + L
Sbjct: 168 TLPANVFQYVPITHLDLRGNRLKTLPYEEVLEQIPGIAEILL 209
>AY358289-1|AAQ88656.1| 696|Homo sapiens LLWI233 protein.
Length = 696
Score = 30.3 bits (65), Expect = 4.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 327 TIASDVYNVSNFVHFHVRGERNSSMCAEPASEQVPGAAAVTL 202
T+ ++V+ H +RG R ++ E EQ+PG A + L
Sbjct: 168 TLPANVFQYVPITHLDLRGNRLKTLPYEEVLEQIPGIAEILL 209
>AL355481-1|CAC37488.1| 696|Homo sapiens SLIT and NTRK-like family,
member 1 protein.
Length = 696
Score = 30.3 bits (65), Expect = 4.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 327 TIASDVYNVSNFVHFHVRGERNSSMCAEPASEQVPGAAAVTL 202
T+ ++V+ H +RG R ++ E EQ+PG A + L
Sbjct: 168 TLPANVFQYVPITHLDLRGNRLKTLPYEEVLEQIPGIAEILL 209
>AB067497-1|BAB67803.1| 760|Homo sapiens KIAA1910 protein protein.
Length = 760
Score = 30.3 bits (65), Expect = 4.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 327 TIASDVYNVSNFVHFHVRGERNSSMCAEPASEQVPGAAAVTL 202
T+ ++V+ H +RG R ++ E EQ+PG A + L
Sbjct: 232 TLPANVFQYVPITHLDLRGNRLKTLPYEEVLEQIPGIAEILL 273
>BC114950-1|AAI14951.1| 465|Homo sapiens DACH2 protein protein.
Length = 465
Score = 29.9 bits (64), Expect = 6.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 156 SISYTSVYRLEDDELQGLPPRHQGLVRSQVPHTWNYSA 269
S++ +V + LQ PPR +G + +P +WNYS+
Sbjct: 6 SVAQAAVQWCDLGSLQLPPPRFKGFLCLSLPSSWNYSS 43
>AK125861-1|BAC86325.1| 367|Homo sapiens protein ( Homo sapiens
cDNA FLJ43873 fis, clone TESTI4008429, highly similar
to Probable cation-transporting ATPase 2 (EC 3.6.3.-).
).
Length = 367
Score = 29.9 bits (64), Expect = 6.5
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 246 PHTWNYSALHVHESVQSWRHCRHQRQWC 329
PH S H H + SWR C WC
Sbjct: 276 PHPMKPSVPHPHRARPSWRACPRTSPWC 303
>AK123780-1|BAC85690.1| 367|Homo sapiens protein ( Homo sapiens
cDNA FLJ41786 fis, clone KIDNE2001361, highly similar
to Mus musculus catp mRNA for cation-transporting
atpase. ).
Length = 367
Score = 29.9 bits (64), Expect = 6.5
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 246 PHTWNYSALHVHESVQSWRHCRHQRQWC 329
PH S H H + SWR C WC
Sbjct: 276 PHPMKPSVPHPHRARPSWRACPRTSPWC 303
>AK074159-1|BAB84985.1| 318|Homo sapiens FLJ00232 protein protein.
Length = 318
Score = 29.9 bits (64), Expect = 6.5
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 246 PHTWNYSALHVHESVQSWRHCRHQRQWC 329
PH S H H + SWR C WC
Sbjct: 227 PHPMKPSVPHPHRARPSWRACPRTSPWC 254
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,077,153
Number of Sequences: 237096
Number of extensions: 1615453
Number of successful extensions: 7784
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 7613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7783
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -