Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5585
         (375 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   1.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.2  
AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase p...    24   2.1  
AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.         24   2.1  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    22   8.7  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -1

Query: 222 SVILGTVRKVHLRLYSDSPSYVGRIVMSDLVGNFILLILCHGAR 91
           S+ L    ++ +RLY+D P+      +SDL    +  +L    R
Sbjct: 415 SIELEECERIFVRLYADYPAECKEFGLSDLAAGVVAPLLASRLR 458


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +3

Query: 165 LASLNIAAG--ELSEPYRELPNLYDVKKRD-VQY 257
           L  LN  AG  ELS P  ELPN + V  R  VQY
Sbjct: 416 LQPLNPHAGTVELSIPLIELPNAFGVSVRKYVQY 449


>AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase
           protein.
          Length = 557

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 202 NRTENYRIYTMS 237
           NRT NYR+ TMS
Sbjct: 490 NRTANYRVVTMS 501


>AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.
          Length = 557

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 202 NRTENYRIYTMS 237
           NRT NYR+ TMS
Sbjct: 490 NRTANYRVVTMS 501


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 145 NERFSGQLHSVNFVSRCARIVKFHSQR 65
           NE F+G + S + +  C   ++ H Q+
Sbjct: 425 NEVFTGGISSYSLILMCISFLQQHHQK 451


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 348,546
Number of Sequences: 2352
Number of extensions: 6378
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28804305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)