Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5585
         (375 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69304-1|CAI42009.1|  638|Homo sapiens zinc finger, matrin type ...    36   0.057
Z68868-2|CAI42751.1|  638|Homo sapiens zinc finger, matrin type ...    36   0.057

>Z69304-1|CAI42009.1|  638|Homo sapiens zinc finger, matrin type 1
           protein.
          Length = 638

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = -3

Query: 205 GSESSPAAIFRLAKLRRSYCNERFSGQLHSVNFVSRCARIVKFHSQRLKKYNFKKALQ 32
           GS  SPA+  ++A    +  NE+   +L +  F   C  +++F SQR+  Y  +K  Q
Sbjct: 25  GSSDSPASASQIAGTTDAIWNEQEKAELFTDKFCQVCGVMLQFESQRISHYEGEKHAQ 82


>Z68868-2|CAI42751.1|  638|Homo sapiens zinc finger, matrin type 1
           protein.
          Length = 638

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = -3

Query: 205 GSESSPAAIFRLAKLRRSYCNERFSGQLHSVNFVSRCARIVKFHSQRLKKYNFKKALQ 32
           GS  SPA+  ++A    +  NE+   +L +  F   C  +++F SQR+  Y  +K  Q
Sbjct: 25  GSSDSPASASQIAGTTDAIWNEQEKAELFTDKFCQVCGVMLQFESQRISHYEGEKHAQ 82


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,811,563
Number of Sequences: 237096
Number of extensions: 714455
Number of successful extensions: 997
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)