Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5581
         (349 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50794-8|CAA90655.2|  450|Caenorhabditis elegans Hypothetical pr...    28   2.1  
Z49937-9|CAO78727.1|  450|Caenorhabditis elegans Hypothetical pr...    28   2.1  
AC084197-33|AAN63423.2|  352|Caenorhabditis elegans Him-three pa...    27   2.8  
Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z78198-8|CAB01574.2|  333|Caenorhabditis elegans Hypothetical pr...    27   4.9  
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor...    26   8.5  
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor...    26   8.5  
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch...    26   8.5  

>Z50794-8|CAA90655.2|  450|Caenorhabditis elegans Hypothetical
           protein F59F5.1 protein.
          Length = 450

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -1

Query: 319 PSPWKSIVNIIC*VQNVFLKTGIRRVPHRYAAMCCSLLMATGDGNDS 179
           PS W++I   IC    +F +TG+R+V + +          T D  D+
Sbjct: 31  PSEWRNIWVAICGFYILFAETGVRQVMNGFVEPVIKTYNCTKDQADT 77


>Z49937-9|CAO78727.1|  450|Caenorhabditis elegans Hypothetical
           protein F59F5.1 protein.
          Length = 450

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -1

Query: 319 PSPWKSIVNIIC*VQNVFLKTGIRRVPHRYAAMCCSLLMATGDGNDS 179
           PS W++I   IC    +F +TG+R+V + +          T D  D+
Sbjct: 31  PSEWRNIWVAICGFYILFAETGVRQVMNGFVEPVIKTYNCTKDQADT 77


>AC084197-33|AAN63423.2|  352|Caenorhabditis elegans Him-three
           paralog protein 2 protein.
          Length = 352

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 341 FLLRGCYSFAVEVNREHNLLSTECISKNRYTES 243
           F++R  Y     V R+ N+L  E  SKN  TE+
Sbjct: 41  FMIRAIYVVFSAVLRQRNILEKEYFSKNYITEN 73


>Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical
           protein T15D6.6 protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 223 SLHTGGVLSVYLFLEIHSVLNKLCSRLTST 312
           +++T  + SV  FLEI SV NKL + L  T
Sbjct: 176 NMNTLNIKSVEEFLEITSVQNKLAAELCKT 205


>Z78198-8|CAB01574.2|  333|Caenorhabditis elegans Hypothetical
           protein F55C5.9 protein.
          Length = 333

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 187 CRLPWPSVNYSTSLHTGGVLSVYLFLEIHSVLNKLCSRLTSTAK 318
           C+ P  SV Y T +HT  +L V L+L +   L K+ S +  T K
Sbjct: 6   CQTPPISV-YKTLMHTLHILDVPLYLIVIIALFKIKSNIFQTYK 48


>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
            protein protein1, isoform b protein.
          Length = 1284

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 159  TSYKSHI*VPNCPTEGAKQSCDFKR*APAWLCPWHC 52
            T+ K+ I +P    +  K   +F R   AW C  HC
Sbjct: 989  TNDKTVIRIPKSAIKELKDVLNFSRSMVAWSCDLHC 1024


>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
            protein protein1, isoform a protein.
          Length = 1280

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 159  TSYKSHI*VPNCPTEGAKQSCDFKR*APAWLCPWHC 52
            T+ K+ I +P    +  K   +F R   AW C  HC
Sbjct: 985  TNDKTVIRIPKSAIKELKDVLNFSRSMVAWSCDLHC 1020


>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
            protein protein.
          Length = 1280

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 159  TSYKSHI*VPNCPTEGAKQSCDFKR*APAWLCPWHC 52
            T+ K+ I +P    +  K   +F R   AW C  HC
Sbjct: 985  TNDKTVIRIPKSAIKELKDVLNFSRSMVAWSCDLHC 1020


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,814,688
Number of Sequences: 27780
Number of extensions: 178733
Number of successful extensions: 415
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)