Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5581
         (349 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   0.78 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   7.3  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         20   9.6  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   9.6  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    20   9.6  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    20   9.6  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    20   9.6  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    20   9.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   9.6  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 0.78
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 53   QCQGQSQAGAYRLKSHDC 106
            QC+G S   A  L+ HDC
Sbjct: 1633 QCEGDSLNVAKSLQDHDC 1650


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 205 SVNYSTSLHTGGVLSVYLFLE 267
           S  Y+  LH     S+Y FLE
Sbjct: 463 SAAYNVELHNSSPFSIYSFLE 483


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 205 SVNYSTSLHTGGVLSVYLFLE 267
           S  Y+  LH     S+Y FLE
Sbjct: 501 SAAYNVELHNSSPFSIYSFLE 521


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 174 NGESLPSPVAISKLQHIAAYRWGTLRI 254
           NGE+      I  LQH  A  W T+ +
Sbjct: 871 NGETRTINCEIGGLQHPGAVVWFTVSL 897


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 323 YSFAVEVNREHNLLSTECISKNRY 252
           Y F  +  R+  +LS E   KN Y
Sbjct: 42  YDFGSDERRQDAILSGEYDYKNNY 65


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 196 PWPSVNYSTSLHTGGVLSVY 255
           P+P+ +Y+   +  G+ SVY
Sbjct: 105 PYPNWSYNDVKYCDGLTSVY 124


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +1

Query: 196 PWPSVNYSTSLHTGGVLSVY 255
           P+P+ +++ + +  G+ SVY
Sbjct: 107 PYPNWSWAKNQNCSGITSVY 126


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1

Query: 217 CSLLMATGDGNDSPLDGP 164
           C L  A  D   S LDGP
Sbjct: 141 CKLQAAAVDHQGSVLDGP 158


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 323 YSFAVEVNREHNLLSTECISKNRY 252
           Y F  +  R+  +LS E   KN Y
Sbjct: 42  YDFGSDERRQDAILSGEYDYKNNY 65


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 323 YSFAVEVNREHNLLSTECISKNRY 252
           Y F  +  R+  +LS E   KN Y
Sbjct: 42  YDFGSDERRQDAILSGEYDYKNNY 65


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 234 GMQRCAVVY*WPRET 190
           G +R AV+Y  PR T
Sbjct: 609 GTRRAAVIYGIPRST 623


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,537
Number of Sequences: 438
Number of extensions: 2751
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)