Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5580
(363 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 23 1.1
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 1.5
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 1.5
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 1.9
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 1.9
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 4.5
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 4.5
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 4.5
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 21 4.5
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 20 7.8
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 20 7.8
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 20 7.8
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 20 7.8
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 23.0 bits (47), Expect = 1.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 186 HVVNLTQKLPIIFRWK 139
H NLT L +I+ WK
Sbjct: 21 HSRNLTNSLKVIYEWK 36
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 22.6 bits (46), Expect = 1.5
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -2
Query: 107 VIGFFCRLFRRTKKK*RAIRSDTR 36
++G +CRL+ +K ++IR+ T+
Sbjct: 208 MLGIYCRLYCYAQKHVKSIRAVTK 231
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 1.5
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 360 ASCPHHPHLIATVHRSHASA 301
A+ PHH H H S+ +A
Sbjct: 437 AATPHHQHSTPLAHSSYPAA 456
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 22.2 bits (45), Expect = 1.9
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -1
Query: 114 IQSYWVFLPTVSTYEKKVK 58
I SYW + V+ +EK ++
Sbjct: 233 IYSYWFIIQAVAAHEKNMR 251
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 22.2 bits (45), Expect = 1.9
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -1
Query: 114 IQSYWVFLPTVSTYEKKVK 58
I SYW + V+ +EK ++
Sbjct: 109 IYSYWFIIQAVAAHEKNMR 127
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/35 (22%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 234 QSFIPLSSL-NDALKINHVVNLTQKLPIIFRWKCP 133
QS+ +++ N+ ++I+H ++T+ + + CP
Sbjct: 105 QSYFHIATTSNEFIRIHHSGSITRSIRLTITASCP 139
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/35 (22%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 234 QSFIPLSSL-NDALKINHVVNLTQKLPIIFRWKCP 133
QS+ +++ N+ ++I+H ++T+ + + CP
Sbjct: 105 QSYFHIATTSNEFIRIHHSGSITRSIRLTITASCP 139
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/35 (22%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 234 QSFIPLSSL-NDALKINHVVNLTQKLPIIFRWKCP 133
QS+ +++ N+ ++I+H ++T+ + + CP
Sbjct: 44 QSYFHIATTSNEFIRIHHSGSITRSIRLTITASCP 78
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.0 bits (42), Expect = 4.5
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 280 RIIQYLVQVQLLFNITKFHSLIELKRC 200
R++Q LV ++ ++ IELK+C
Sbjct: 494 RVVQKLVNTTVMRDLGVEFQKIELKQC 520
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 20.2 bits (40), Expect = 7.8
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 177 NLTQKLPIIFRWK 139
NLT L +I +WK
Sbjct: 31 NLTNTLNVIHKWK 43
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 20.2 bits (40), Expect = 7.8
Identities = 5/18 (27%), Positives = 13/18 (72%)
Frame = -3
Query: 313 PCKCKRLRSIERIIQYLV 260
PC K+ + ++++Q+L+
Sbjct: 77 PCSEKQKKIADKVVQFLI 94
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 20.2 bits (40), Expect = 7.8
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +1
Query: 271 GLYAQSNVIACTCMGSVHCCYEVRVMW 351
GLY S V+ C M + + +W
Sbjct: 121 GLYLSSFVLVCISMDRYYAVIKPLQLW 147
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 20.2 bits (40), Expect = 7.8
Identities = 5/18 (27%), Positives = 13/18 (72%)
Frame = -3
Query: 313 PCKCKRLRSIERIIQYLV 260
PC K+ + ++++Q+L+
Sbjct: 77 PCSEKQKKIADKVVQFLI 94
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,059
Number of Sequences: 438
Number of extensions: 2071
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8556345
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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