Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5578
(537 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.14
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 0.77
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 1.0
SPBC1271.02 |stt3||oligosaccharyltransferase subunit Stt3|Schizo... 27 1.3
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 27 1.3
SPAC607.03c |snu13||U3 snoRNP-associated protein Snu13|Schizosac... 27 1.8
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 27 1.8
SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyce... 27 2.3
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 26 4.1
SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|c... 26 4.1
SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces ... 25 5.4
SPBC646.12c |gap1|src1, sar1|GTPase activating protein Gap1|Schi... 25 5.4
SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/ diacylg... 25 7.2
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 25 7.2
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 25 7.2
SPBC31F10.07 |||cortical component Lsb5 |Schizosaccharomyces pom... 25 7.2
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 25 7.2
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 25 7.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 7.2
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 25 9.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 9.5
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 25 9.5
SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.5
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 25 9.5
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.7 bits (66), Expect = 0.14
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 105 SASRTPATTIPAFSQIKARH*QSSHSKPASQPQQDH--RSRLTALPGPTARNFTGSSRRN 278
S S P+T+ + S + SS S +S S ++ PT+ + T SS +
Sbjct: 236 STSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSS 295
Query: 279 SSSQPTTGSSTL 314
SSS PT+ SST+
Sbjct: 296 SSSSPTSTSSTI 307
Score = 29.9 bits (64), Expect = 0.25
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Frame = +1
Query: 178 TASQHRSLNRTIAADSPRFLVLRHATSLAHHAATVHRSPRPDHQRLGSHISGVAALHTWT 357
T+S SL+ + ++ P +TS + ++ S + S +S ++ + +
Sbjct: 171 TSSTFSSLSSSTSSSQPSV----SSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSS-S 225
Query: 358 TGDTHAAFKLSLDS-PQTSSSTGDTHAAFKLSLDSPQASSSTGPCKLISARTT 513
+ T + LS S P TSSS+ T ++ S S ASSS+ +IS+ ++
Sbjct: 226 SSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSS 278
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 28.3 bits (60), Expect = 0.77
Identities = 26/97 (26%), Positives = 42/97 (43%)
Frame = +3
Query: 105 SASRTPATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTGSSRRNSS 284
S+S T TT P+ S SS S +S S ++ ++ + + SS +SS
Sbjct: 145 SSSSTTTTTSPSSS--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 196
Query: 285 SQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQSR 395
S ++ SS+ V SS+H + S + SR
Sbjct: 197 SSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSR 233
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.9 bits (59), Expect = 1.0
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = +3
Query: 117 TPATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTGSSRRNSSSQPT 296
T +T+ + I SS S P + + T++P P T S+ NSS PT
Sbjct: 167 TTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTS--TSSTDTNSSPLPT 224
Query: 297 TGSSTLGVTHLRRGSSAHM 353
T +S T + G S+ +
Sbjct: 225 TSTSCTTSTSIPTGGSSSL 243
>SPBC1271.02 |stt3||oligosaccharyltransferase subunit
Stt3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 752
Score = 27.5 bits (58), Expect = 1.3
Identities = 9/43 (20%), Positives = 20/43 (46%)
Frame = +1
Query: 175 PTASQHRSLNRTIAADSPRFLVLRHATSLAHHAATVHRSPRPD 303
P R+ N+ + + P+ + A + HH +++ +PD
Sbjct: 677 PNQGYDRARNQKLPSKDPQLFTIEEAFTTVHHLVRLYKVKKPD 719
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 27.5 bits (58), Expect = 1.3
Identities = 17/73 (23%), Positives = 31/73 (42%)
Frame = +1
Query: 259 LAHHAATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAA 438
L H +HR+P+P +R + +L + T+ A K + PQ S +
Sbjct: 120 LLRHQQKIHRNPQPRRRRRSTTALPNPSLSNVSVSTTNLASKPVISLPQADSIDKFRYPK 179
Query: 439 FKLSLDSPQASSS 477
+L + A++S
Sbjct: 180 LHAALQAQLANNS 192
>SPAC607.03c |snu13||U3 snoRNP-associated protein
Snu13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 125
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 128 HNPRILADKSTSLTVVPQQASIAASTGPSQPTHRAS 235
H P + DK+ VP +A++ + G S+P AS
Sbjct: 65 HLPLLCEDKNVPYVFVPSKAALGRACGVSRPVISAS 100
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 1.8
Identities = 20/66 (30%), Positives = 26/66 (39%)
Frame = +3
Query: 231 LPGPTARNFTGSSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQSRLTADF 410
LP P+A T S N SS T S + H S + RH R + ++R
Sbjct: 91 LPQPSALALTSSKAANRSSTNTEKDSR-SIAHSTSRSRSTSPANRHRRKEKERTRSNHRH 149
Query: 411 EQHWRH 428
H RH
Sbjct: 150 GSHRRH 155
>SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 342
Score = 26.6 bits (56), Expect = 2.3
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +1
Query: 88 PSDSSSAHQELRLPQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLRHATSLAH 267
P+ S L P+ S H+ D P S R+ +RT++ S +L +RH
Sbjct: 207 PTKSIYDQNGLTTPRPIGSDDLTHMYD--PYTSPLRTPSRTLSRSSSHYLWVRHGKLTRS 264
Query: 268 HAATVHRSPR 297
+ H++PR
Sbjct: 265 VSLLQHKTPR 274
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 152 KSTSLTVVPQQASIAASTG-PSQPTHRASWSYGTQLHW 262
KST + V P+Q S A+ G S P+ +S S T+ W
Sbjct: 651 KSTQVPVTPKQKSSTANKGSTSSPSPPSSESKKTKRSW 688
>SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +1
Query: 97 SSSAHQELRLPQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLRHATSL 261
S + + S S + K I+ A H++ NRT DSP +V T L
Sbjct: 295 SHQPYHYTNVKDSQGSHQTKVTIEENMEAPSHQAANRTTLTDSPLGIVEDETTIL 349
>SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 285
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 178 TASQHRS-LNRTIAADSPRFLVLRHATSLAHHAATVHRSP 294
T S+ S LN + ++ +++ + +S +HH +H+SP
Sbjct: 31 TFSKRNSILNNQVCFEAIKYIQRHYFSSQSHHVTYLHQSP 70
>SPBC646.12c |gap1|src1, sar1|GTPase activating protein
Gap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 766
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 530 FFFLISVVRAEISLQGPVLLEACGESRLSLNAACVSPVLLEV 405
FFFL V A IS Q +LL++C + A ++ ++ V
Sbjct: 336 FFFLRFVNPAIISPQTSMLLDSCPSDNVRKTLATIAKIIQSV 377
>SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/
diacylglycerol ethanolaminesphotranferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 386
Score = 25.0 bits (52), Expect = 7.2
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +2
Query: 233 SWSYGTQLHWLITPQQFIAAHDRIINAWGHTSPAWQLCTHGLLATRT 373
SW Y + L Q F A G +SP QL HG+ A T
Sbjct: 79 SWVYASWAIGLFLYQSFDAIDGSQARRTGTSSPLGQLFDHGVDAINT 125
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.0 bits (52), Expect = 7.2
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 174 SHSKPASQPQQDHRSRLTALPGPTARNFTGSSRRNSSSQPTTGSS 308
S KPA+ + +T T N + + N+ S PTTG S
Sbjct: 227 SFGKPATTSAPGSNTTVTPSSSITGTNDSKPAASNTGSAPTTGFS 271
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 25.0 bits (52), Expect = 7.2
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +3
Query: 99 IFSASRTPATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTGSSRRN 278
+ S+ T +P S +RH S+ +KPA+ + + LP + SR N
Sbjct: 96 VVSSKPNQTTAMPPPSNNPSRHVSSTSNKPAA-VSPNPAAHHAELPSGSVPPSASVSRAN 154
Query: 279 SSSQPTTGSSTLGVTHLRRGSSAHM 353
S++ TT GV ++ H+
Sbjct: 155 STA--TTTPHKAGVVSNPAAANVHV 177
>SPBC31F10.07 |||cortical component Lsb5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 304
Score = 25.0 bits (52), Expect = 7.2
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 83 RNLLIHLQRIKNSGYHNPRILADKSTSLTVVPQQASIAASTGPSQPT 223
R IH+ ++ ++ Y N R + S+ ++ +PQ+ S A+ + QPT
Sbjct: 111 RKRAIHMIKLWHNDYSNVRGMESMSSLVSRLPQRQSSASHS--EQPT 155
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 25.0 bits (52), Expect = 7.2
Identities = 14/61 (22%), Positives = 27/61 (44%)
Frame = +3
Query: 183 KPASQPQQDHRSRLTALPGPTARNFTGSSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYW 362
KPA + + ++ P P N +G S N+++ TT S ++ + S+ W
Sbjct: 1604 KPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTTSTTPVSLSELSEITLFPSSVSPTW 1663
Query: 363 R 365
+
Sbjct: 1664 K 1664
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 25.0 bits (52), Expect = 7.2
Identities = 14/61 (22%), Positives = 27/61 (44%)
Frame = +3
Query: 183 KPASQPQQDHRSRLTALPGPTARNFTGSSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYW 362
KPA + + ++ P P N +G S N+++ TT S ++ + S+ W
Sbjct: 1604 KPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTTSTTPVSLSELSEITLFPSSVSPTW 1663
Query: 363 R 365
+
Sbjct: 1664 K 1664
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 311 AWGHTSPAWQLCTHGLLATRTQHSSSVSTH 400
++ ++S + H +L T+++HSSS S+H
Sbjct: 306 SYDNSSETFVEAIHKILDTKSKHSSSKSSH 335
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 262 AHHAATVHRSPRPDHQRLGSHI 327
AHH H P P H + G H+
Sbjct: 199 AHHEPGEHMPPPPMHHKPGEHM 220
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 24.6 bits (51), Expect = 9.5
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +1
Query: 40 RIHPQTGDLRRDVNTQPSDSSSAHQELRLPQSPHSRR*KHVIDSRPTAS 186
R H +T + QP+ S L P S HS VI RP S
Sbjct: 747 RKHRETEEEDEGPPPQPARPESTRPALAPPSSSHSNDKYDVIQERPKIS 795
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 61 DLRRDVNTQPSDSSSAHQELRLPQSPHSRR*KHVIDSRP 177
D R + +P S+ +PQ+ S K V+DS P
Sbjct: 465 DSNRSIEPEPDVISTVRNSSTIPQASSSSVPKIVVDSSP 503
>SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 386
Score = 24.6 bits (51), Expect = 9.5
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 184 SQHRSLNRTIAADSPRFLVLRHATSLAHHAATVHRSPRPDHQRLGSHIS 330
S+ +LN S F ++ A++ T H+ P LGSH S
Sbjct: 45 SKDNTLNHVKQEPSDGFSSVKWASTSFDSTVTAHKEETPYSSSLGSHDS 93
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 24.6 bits (51), Expect = 9.5
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +3
Query: 117 TPATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTGSSRRNSSSQPT 296
T A + A S +H Q + S Q+ H + TA+ PTA S PT
Sbjct: 176 THANPVAAPSTATTQHTQLPKTSAVSH-QKPHEAPSTAVKAPTATVAENEPYPKPQSVPT 234
Query: 297 TGS 305
T S
Sbjct: 235 TTS 237
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,206,799
Number of Sequences: 5004
Number of extensions: 44858
Number of successful extensions: 240
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 222442660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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