Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5578
(537 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 33 0.17
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 33 0.17
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 33 0.17
AL132904-3|CAB60972.1| 718|Caenorhabditis elegans Hypothetical ... 29 1.6
AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical ... 29 2.1
AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical ... 29 2.1
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 29 2.8
AF016684-5|AAB66207.2| 297|Caenorhabditis elegans Hypothetical ... 28 3.7
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 28 4.9
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 28 4.9
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 28 4.9
AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek (dictyo... 28 4.9
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 28 4.9
Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical p... 27 6.5
Z72507-10|CAA96629.1| 531|Caenorhabditis elegans Hypothetical p... 27 6.5
Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical p... 27 6.5
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 6.5
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 6.5
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 6.5
U12964-2|AAL02498.1| 293|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical ... 27 6.5
AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical... 27 6.5
AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical... 27 6.5
AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 27 6.5
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 8.6
AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math ... 27 8.6
AF038619-3|AAO91713.1| 126|Caenorhabditis elegans Hypothetical ... 27 8.6
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +3
Query: 96 FIFSASRTPATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTGSSRR 275
F + T +T+P+ S + + SS S + P S LT+ P P++ +G+
Sbjct: 450 FSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQST 509
Query: 276 NSSSQPTTGSSTLGVTHLRRGSS 344
++ P ST + G++
Sbjct: 510 LTTPSPNPSQSTSSLESSTSGAT 532
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +3
Query: 96 FIFSASRTPATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTGSSRR 275
F + T +T+P+ S + + SS S + P S LT+ P P++ +G+
Sbjct: 657 FSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQST 716
Query: 276 NSSSQPTTGSSTLGVTHLRRGSS 344
++ P ST + G++
Sbjct: 717 LTTPSPNPSQSTSSLESSTSGAT 739
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +3
Query: 96 FIFSASRTPATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTGSSRR 275
F + T +T+P+ S + + SS S + P S LT+ P P++ +G+
Sbjct: 657 FSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQST 716
Query: 276 NSSSQPTTGSSTLGVTHLRRGSS 344
++ P ST + G++
Sbjct: 717 LTTPSPNPSQSTSSLESSTSGAT 739
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 349 TWTTGDTHAAFKLSLDSPQTSSSTG-DTHAAFKLSLDSPQASSSTGPCKLISARTT 513
T T G T + S P TS +T T + +S +PQ+S ST P + ++ T
Sbjct: 956 TVTVGSTEGS---SSPIPSTSQNTNPSTSSGSSMSTQTPQSSQSTSPVESSTSGAT 1008
>AL132904-3|CAB60972.1| 718|Caenorhabditis elegans Hypothetical
protein Y111B2A.3 protein.
Length = 718
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = +3
Query: 192 SQPQQDHRSRLTALPGPTARNFTGSSRRNSSSQPTTGSSTLG 317
S+ DH +R A PG R F G SR NSS+ GSST G
Sbjct: 678 SERNMDHWTR-PASPGN--RPFFGGSRMNSSTSRAHGSSTNG 716
>AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical
protein D1007.13a protein.
Length = 142
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 176 PQQASIAASTGPSQPTHRASWSYGTQLHWLITPQQFIAAHDRIINAWGHTSPAWQLCT 349
P + +ST S P +S +YG+ + P F + ++WG T P L T
Sbjct: 15 PSSPASTSSTAYSPPPATSSTTYGSSIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPT 72
>AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical
protein D1007.13b protein.
Length = 247
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 176 PQQASIAASTGPSQPTHRASWSYGTQLHWLITPQQFIAAHDRIINAWGHTSPAWQLCT 349
P + +ST S P +S +YG+ + P F + ++WG T P L T
Sbjct: 120 PSSPASTSSTAYSPPPATSSTTYGSSIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPT 177
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 180 SKPASQPQQDHRSRLTALPGPTARNFTGSSRRNSSSQPT---TGSSTLGVTHLRRGSS 344
S AS Q S TA PG + T +S + SSS T TGS+T+ T + +GSS
Sbjct: 925 STSASSSTQPIASSTTANPGSSTSGPTIASTQGSSSTQTNSNTGSTTVATT-VTQGSS 981
Score = 28.3 bits (60), Expect = 3.7
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +3
Query: 111 SRTPATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTGSSRRNSSSQ 290
S T + + SQ+ + S S S +T P ++R+ +S+ +SS+Q
Sbjct: 682 SSTTSPVASSSSQMTSTQQPSGSSSSIGSTVNQGSSSVTTQPPASSRST--ASQGSSSAQ 739
Query: 291 PTTGSSTLGVT 323
P SST+G T
Sbjct: 740 PIASSSTMGST 750
Score = 28.3 bits (60), Expect = 3.7
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 126 TTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFT-GSSRRNSSSQPTTG 302
TT P S SS ++P + + ++ P PTA + + SS +SS T G
Sbjct: 720 TTQPPASSRSTASQGSSSAQPIASSSTMGSTAGSSSPQPTASSTSVPSSTGATSSGSTVG 779
Query: 303 SSTLGVTHLRRGSS 344
SST+G T SS
Sbjct: 780 SSTMGSTQSSLPSS 793
>AF016684-5|AAB66207.2| 297|Caenorhabditis elegans Hypothetical
protein F45C12.8 protein.
Length = 297
Score = 28.3 bits (60), Expect = 3.7
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 351 MDYWRHARSIQAQSRLTADFE 413
+D W+ AR+++A S++T FE
Sbjct: 252 LDQWKRARTLRAHSKMTVPFE 272
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 346 AELPRRRCVTPSVDDPVVGCDELLRRDEPVKLRAVGPGSAVSRLRWS 206
A L ++ V P DP+ + + RD+P + + PG++ +LRWS
Sbjct: 1215 AVLEVKKPVIPPKVDPI---RQTVDRDQPARFKCWVPGNSNVQLRWS 1258
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 346 AELPRRRCVTPSVDDPVVGCDELLRRDEPVKLRAVGPGSAVSRLRWS 206
A L ++ V P DP+ + + RD+P + + PG++ +LRWS
Sbjct: 1308 AVLEVKKPVIPPKVDPI---RQTVDRDQPARFKCWVPGNSNVQLRWS 1351
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 346 AELPRRRCVTPSVDDPVVGCDELLRRDEPVKLRAVGPGSAVSRLRWS 206
A L ++ V P DP+ + + RD+P + + PG++ +LRWS
Sbjct: 1308 AVLEVKKPVIPPKVDPI---RQTVDRDQPARFKCWVPGNSNVQLRWS 1351
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 346 AELPRRRCVTPSVDDPVVGCDELLRRDEPVKLRAVGPGSAVSRLRWS 206
A L ++ V P DP+ + + RD+P + + PG++ +LRWS
Sbjct: 1308 AVLEVKKPVIPPKVDPI---RQTVDRDQPARFKCWVPGNSNVQLRWS 1351
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 346 AELPRRRCVTPSVDDPVVGCDELLRRDEPVKLRAVGPGSAVSRLRWS 206
A L ++ V P DP+ + + RD+P + + PG++ +LRWS
Sbjct: 1215 AVLEVKKPVIPPKVDPI---RQTVDRDQPARFKCWVPGNSNVQLRWS 1258
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 346 AELPRRRCVTPSVDDPVVGCDELLRRDEPVKLRAVGPGSAVSRLRWS 206
A L ++ V P DP+ + + RD+P + + PG++ +LRWS
Sbjct: 1308 AVLEVKKPVIPPKVDPI---RQTVDRDQPARFKCWVPGNSNVQLRWS 1351
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 346 AELPRRRCVTPSVDDPVVGCDELLRRDEPVKLRAVGPGSAVSRLRWS 206
A L ++ V P DP+ + + RD+P + + PG++ +LRWS
Sbjct: 1308 AVLEVKKPVIPPKVDPI---RQTVDRDQPARFKCWVPGNSNVQLRWS 1351
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 346 AELPRRRCVTPSVDDPVVGCDELLRRDEPVKLRAVGPGSAVSRLRWS 206
A L ++ V P DP+ + + RD+P + + PG++ +LRWS
Sbjct: 1308 AVLEVKKPVIPPKVDPI---RQTVDRDQPARFKCWVPGNSNVQLRWS 1351
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +1
Query: 67 RRDVNTQPSDSSSAHQELRL---PQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPR 231
++D D S + +EL + PQ+P RR +++ TA + R + A++ PR
Sbjct: 817 KKDQPEASEDLSDSREELSVAAGPQAPKKRRRGRMMEDPETARKRRKGRKLEASEDPR 874
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 346 AELPRRRCVTPSVDDPVVGCDELLRRDEPVKLRAVGPGSAVSRLRWS 206
A L ++ V P DP+ + + RD+P + + PG++ +LRWS
Sbjct: 1307 AVLEVKKPVIPPKVDPI---RQTVDRDQPARFKCWVPGNSNVQLRWS 1350
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +1
Query: 67 RRDVNTQPSDSSSAHQELRL---PQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPR 231
++D D S + +EL + PQ+P RR +++ TA + R + A++ PR
Sbjct: 817 KKDQPEASEDLSDSREELSVAAGPQAPKKRRRGRMMEDPETARKRRKGRKLEASEDPR 874
>AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform b protein.
Length = 849
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 171 SSHSKPASQPQQDHRSRLTALPGPTARNFTGSSRRNSSSQPT 296
+S P+ P R ++ PGP+ + SS+ N S PT
Sbjct: 690 NSDRSPSRTPSPASSPRASSSPGPSRDDEVTSSQNNKESSPT 731
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 171 SSHSKPASQPQQDHRSRLTALPGPTARNFTGSSRRNSSSQPT 296
+S P+ P R ++ PGP+ + SS+ N S PT
Sbjct: 926 NSDRSPSRTPSPASSPRASSSPGPSRDDEVTSSQNNKESSPT 967
>Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical
protein F17C11.7b protein.
Length = 515
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +2
Query: 53 KLVTCDEM*TRNLLIHLQRIKNSGYHNPRILADKSTSLTVVPQQASIAAST---GPSQPT 223
KL+ C E LL H ++ NS YH+ ++ ++ + + S PSQ T
Sbjct: 165 KLLACKENGISTLL-HPSKLYNSVYHSSHLVVEQQCDKDQCNSKMEVGVSVVMRNPSQKT 223
Query: 224 HRASWS 241
R WS
Sbjct: 224 QR-HWS 228
>Z72507-10|CAA96629.1| 531|Caenorhabditis elegans Hypothetical
protein F17C11.7a protein.
Length = 531
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +2
Query: 53 KLVTCDEM*TRNLLIHLQRIKNSGYHNPRILADKSTSLTVVPQQASIAAST---GPSQPT 223
KL+ C E LL H ++ NS YH+ ++ ++ + + S PSQ T
Sbjct: 181 KLLACKENGISTLL-HPSKLYNSVYHSSHLVVEQQCDKDQCNSKMEVGVSVVMRNPSQKT 239
Query: 224 HRASWS 241
R WS
Sbjct: 240 QR-HWS 244
>Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical
protein R07B1.8 protein.
Length = 425
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 101 LQRIKNSGYHNPRILADKSTSLTVVPQQASIAASTGPSQPT 223
LQ +K+ H P ++ + S+SL P A I P+Q T
Sbjct: 282 LQCVKSKSPHIPAMVIEMSSSLDEEPTSAKIQEQVTPAQLT 322
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 43 IHPQTGDLRRDVNTQPSDSSSAHQELRLPQSPHSRR*KHVIDSRPTASQHR 195
+ P + DV P+ SS A E +P+SPH H++++ T + R
Sbjct: 2533 VSPVDAQEQVDVPHSPAPSSHAESEQPVPESPH-----HIVETTTTTTVTR 2578
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.5 bits (58), Expect = 6.5
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Frame = +3
Query: 63 PATRCEHATF*FIFSASRTPATTIPAFSQIKARH*QSSHS-KPASQPQQDHRSRLTALPG 239
P TRC T T P+ S I + Q S S +P + + ++ P
Sbjct: 1450 PTTRCPGTQGTTQPGTIGTTVTVPPSSSSIGSTAPQGSSSIQPIASSSTMGSTAGSSSPQ 1509
Query: 240 PTARNFT---GSSRRNSSSQPTTGSSTLGVTHLRRGSS 344
PT + + + +S S T GSST+G T SS
Sbjct: 1510 PTVSSTSVPSSTGATSSGSSTTVGSSTVGATQTSVSSS 1547
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 43 IHPQTGDLRRDVNTQPSDSSSAHQELRLPQSPHSRR*KHVIDSRPTASQHR 195
+ P + DV P+ SS A E +P+SPH H++++ T + R
Sbjct: 2533 VSPVDAQEQVDVPHSPAPSSHAESEQPVPESPH-----HIVETTTTTTVTR 2578
>U12964-2|AAL02498.1| 293|Caenorhabditis elegans Hypothetical
protein F26F4.6 protein.
Length = 293
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +1
Query: 301 DHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFKLSLDSPQASSST 480
D L I VA+ T ++ ++ + S +SSS+ D ++A+ S PQA+SS+
Sbjct: 76 DSPNLTKVIDDVASGATGSSSLPSSSTESYSTSSSSSSSSSDLNSAYS-STSEPQATSSS 134
Query: 481 GP 486
P
Sbjct: 135 AP 136
>AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical
protein R10F2.6 protein.
Length = 1150
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 98 HLQRIKNSGYHNPRILADKS 157
H QRI+NSGY +L +KS
Sbjct: 355 HFQRIQNSGYWRSYVLKEKS 374
>AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5c protein.
Length = 391
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/84 (25%), Positives = 32/84 (38%)
Frame = +1
Query: 67 RRDVNTQPSDSSSAHQELRLPQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLR 246
RR+ + SS H+E R + R H R + R + AA P
Sbjct: 230 RREDDKDRRQSSDHHKERRRSPATRQRATDHKESRRSEGTSTRVESAASAAAPPPPPSSS 289
Query: 247 HATSLAHHAATVHRSPRPDHQRLG 318
++ +H AA R+P P + G
Sbjct: 290 SSSKRSHEAAARIRAPSPPRRSFG 313
>AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5b protein.
Length = 526
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/84 (25%), Positives = 32/84 (38%)
Frame = +1
Query: 67 RRDVNTQPSDSSSAHQELRLPQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLR 246
RR+ + SS H+E R + R H R + R + AA P
Sbjct: 365 RREDDKDRRQSSDHHKERRRSPATRQRATDHKESRRSEGTSTRVESAASAAAPPPPPSSS 424
Query: 247 HATSLAHHAATVHRSPRPDHQRLG 318
++ +H AA R+P P + G
Sbjct: 425 SSSKRSHEAAARIRAPSPPRRSFG 448
>AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5a protein.
Length = 571
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/84 (25%), Positives = 32/84 (38%)
Frame = +1
Query: 67 RRDVNTQPSDSSSAHQELRLPQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLR 246
RR+ + SS H+E R + R H R + R + AA P
Sbjct: 410 RREDDKDRRQSSDHHKERRRSPATRQRATDHKESRRSEGTSTRVESAASAAAPPPPPSSS 469
Query: 247 HATSLAHHAATVHRSPRPDHQRLG 318
++ +H AA R+P P + G
Sbjct: 470 SSSKRSHEAAARIRAPSPPRRSFG 493
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +3
Query: 168 QSSHSKPASQPQQDHRSRLTALPGPTARNFTGSSRRNSSSQPTTGSSTLGVTHLRRGSS 344
+S+ + P+S + T+ GP++ + T SS SSS +T SST T ++ S+
Sbjct: 479 ESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTA-SSSVSSTASSTQSSTSTQQSST 536
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +3
Query: 168 QSSHSKPASQPQQDHRSRLTALPGPTARNFTGSSRRNSSSQPTTGSSTLGVTHLRRGSS 344
+S+ + P+S + T+ GP++ + T SS SSS +T SST T ++ S+
Sbjct: 479 ESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTA-SSSVSSTASSTQSSTSTQQSST 536
>AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math
domain containingprotein 47 protein.
Length = 683
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 157 HVIDSRPTASQHRSLNRTIAADSPRFLVLRH 249
+++D R T H ++ R D+P+F LR+
Sbjct: 515 YMVDGRLTVEAHVNITRVTCLDAPKFKKLRN 545
>AF038619-3|AAO91713.1| 126|Caenorhabditis elegans Hypothetical
protein F56A11.7 protein.
Length = 126
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 161 SLTVVPQQASIAASTGPSQPTHRASWSYGTQLH 259
+LT V Q +++ G ++ HR WS GTQLH
Sbjct: 54 TLTCVLQDLYLSSCHG-NEYGHRDLWSVGTQLH 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,776,598
Number of Sequences: 27780
Number of extensions: 286113
Number of successful extensions: 1142
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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