Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5575
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1770|AAF54997.1|  524|Drosophila melanogaster CG9930-PA...    32   0.59 
AF132565-1|AAD27864.2| 1484|Drosophila melanogaster LD23835p pro...    28   9.6  
AF080399-1|AAC32190.1| 1461|Drosophila melanogaster mitotic chec...    28   9.6  
AE013599-122|AAF57298.1| 1460|Drosophila melanogaster CG7838-PA ...    28   9.6  

>AE014297-1770|AAF54997.1|  524|Drosophila melanogaster CG9930-PA
           protein.
          Length = 524

 Score = 32.3 bits (70), Expect = 0.59
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +1

Query: 412 KTFNVLKQSPTSPFV-AGSNLTADFVAIVLNSIISRNTIDTAISCIKVDS 558
           +TFN+L  +PTSPFV + S++ A   ++  +S +S +          +DS
Sbjct: 7   QTFNMLPMAPTSPFVSSSSSVAASSTSVSASSTVSASASSKPKLAFSIDS 56


>AF132565-1|AAD27864.2| 1484|Drosophila melanogaster LD23835p protein.
          Length = 1484

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -3

Query: 198  NIIWKCIKIRNIYNNNNTEYVIISHHIFLLLRLVDELTA 82
            ++I  C K++++ N N  EYV++ H    +L +VD L A
Sbjct: 1281 SLIGVCNKVKSVTNRNMDEYVVM-HLSCQMLDIVDHLHA 1318


>AF080399-1|AAC32190.1| 1461|Drosophila melanogaster mitotic
            checkpoint control proteinkinase BUB1 protein.
          Length = 1461

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -3

Query: 198  NIIWKCIKIRNIYNNNNTEYVIISHHIFLLLRLVDELTA 82
            ++I  C K++++ N N  EYV++ H    +L +VD L A
Sbjct: 1258 SLIGVCNKVKSVTNRNMDEYVVM-HLSCQMLDIVDHLHA 1295


>AE013599-122|AAF57298.1| 1460|Drosophila melanogaster CG7838-PA
            protein.
          Length = 1460

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -3

Query: 198  NIIWKCIKIRNIYNNNNTEYVIISHHIFLLLRLVDELTA 82
            ++I  C K++++ N N  EYV++ H    +L +VD L A
Sbjct: 1257 SLIGVCNKVKSVTNRNMDEYVVM-HLSCQMLDIVDHLHA 1294


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,293,099
Number of Sequences: 53049
Number of extensions: 565711
Number of successful extensions: 986
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)