Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5569
(542 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D83692-1|BAA12059.1| 118|Homo sapiens IgM protein. 32 1.1
AF471502-1|AAQ05677.1| 125|Homo sapiens Ig heavy chain variable... 31 2.0
DQ926649-1|ABI50508.1| 110|Homo sapiens immunoglobulin heavy ch... 31 2.6
CR456403-1|CAG30289.1| 357|Homo sapiens bK268H5.4 protein. 31 2.6
BC013696-1|AAH13696.1| 357|Homo sapiens family with sequence si... 31 2.6
AL008718-6|CAI17949.1| 357|Homo sapiens protein ( Human DNA seq... 31 2.6
AK000642-1|BAA91301.1| 357|Homo sapiens protein ( Homo sapiens ... 31 2.6
AF103239-1|AAD30799.1| 126|Homo sapiens immunoglobulin heavy ch... 29 8.0
>D83692-1|BAA12059.1| 118|Homo sapiens IgM protein.
Length = 118
Score = 32.3 bits (70), Expect = 1.1
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 193 CDALSATVGNFCMDVAIRKAQEAGVGWVGARRSNHYGMAGYWALKAEKQGLIGLSFTNSS 372
C A T G++ M +R+A G+ WVG RSN YG G A +G +S +S
Sbjct: 22 CTASGFTFGDYAMSW-VRQAPGKGLEWVGFIRSNAYG--GTTEYAASVKGRFTISRDDSK 78
Query: 373 PI 378
I
Sbjct: 79 SI 80
>AF471502-1|AAQ05677.1| 125|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 125
Score = 31.5 bits (68), Expect = 2.0
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +1
Query: 151 VILKESAATALVDGCDA-LSATVGNFCMDVA----IRKAQEAGVGWVGARRSNHYGMAGY 315
V+L ES + G LS + F D+ +R+A G+ WVG R+N YG A
Sbjct: 2 VLLVESGGNLVQPGRSLRLSCSTSGFTFDLYAMGWVRQAPGKGLEWVGLSRTNPYGGASE 61
Query: 316 WA 321
+A
Sbjct: 62 YA 63
>DQ926649-1|ABI50508.1| 110|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 110
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 193 CDALSATVGNFCMDVAIRKAQEAGVGWVGARRSNHYG 303
C A T G++ ++ +R+A G+ WVG RSN YG
Sbjct: 22 CTASGFTFGDYVINW-VRQAPGKGLEWVGIIRSNSYG 57
>CR456403-1|CAG30289.1| 357|Homo sapiens bK268H5.4 protein.
Length = 357
Score = 31.1 bits (67), Expect = 2.6
Identities = 27/81 (33%), Positives = 39/81 (48%)
Frame = +1
Query: 25 KAQADLLIHADTVGHYSHGT*QHWEFYINDILSKATDPCAKPVILKESAATALVDGCDAL 204
K QAD+L+H V Y H+ Y+ D+ AT C K+ + A D D+
Sbjct: 273 KHQADMLLHGIKVVSYGDCF-DHFPGYVQDL---ATQIC------KQQSPDA--DRVDS- 319
Query: 205 SATVGNFCMDVAIRKAQEAGV 267
+ +GN C D A RK +E G+
Sbjct: 320 TTLLGNACQDCAKRKLEENGI 340
>BC013696-1|AAH13696.1| 357|Homo sapiens family with sequence
similarity 118, member A protein.
Length = 357
Score = 31.1 bits (67), Expect = 2.6
Identities = 27/81 (33%), Positives = 39/81 (48%)
Frame = +1
Query: 25 KAQADLLIHADTVGHYSHGT*QHWEFYINDILSKATDPCAKPVILKESAATALVDGCDAL 204
K QAD+L+H V Y H+ Y+ D+ AT C K+ + A D D+
Sbjct: 273 KHQADMLLHGIKVVSYGDCF-DHFPGYVQDL---ATQIC------KQQSPDA--DRVDS- 319
Query: 205 SATVGNFCMDVAIRKAQEAGV 267
+ +GN C D A RK +E G+
Sbjct: 320 TTLLGNACQDCAKRKLEENGI 340
>AL008718-6|CAI17949.1| 357|Homo sapiens protein ( Human DNA
sequence from clone CTA-268H5 on chromosome
22q13.2-13.3. ).
Length = 357
Score = 31.1 bits (67), Expect = 2.6
Identities = 27/81 (33%), Positives = 39/81 (48%)
Frame = +1
Query: 25 KAQADLLIHADTVGHYSHGT*QHWEFYINDILSKATDPCAKPVILKESAATALVDGCDAL 204
K QAD+L+H V Y H+ Y+ D+ AT C K+ + A D D+
Sbjct: 273 KHQADMLLHGIKVVSYGDCF-DHFPGYVQDL---ATQIC------KQQSPDA--DRVDS- 319
Query: 205 SATVGNFCMDVAIRKAQEAGV 267
+ +GN C D A RK +E G+
Sbjct: 320 TTLLGNACQDCAKRKLEENGI 340
>AK000642-1|BAA91301.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ20635 fis, clone KAT03466. ).
Length = 357
Score = 31.1 bits (67), Expect = 2.6
Identities = 27/81 (33%), Positives = 39/81 (48%)
Frame = +1
Query: 25 KAQADLLIHADTVGHYSHGT*QHWEFYINDILSKATDPCAKPVILKESAATALVDGCDAL 204
K QAD+L+H V Y H+ Y+ D+ AT C K+ + A D D+
Sbjct: 273 KHQADMLLHGIKVVSYGDCF-DHFPGYVQDL---ATQIC------KQQSPDA--DRVDS- 319
Query: 205 SATVGNFCMDVAIRKAQEAGV 267
+ +GN C D A RK +E G+
Sbjct: 320 TTLLGNACQDCAKRKLEENGI 340
>AF103239-1|AAD30799.1| 126|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 126
Score = 29.5 bits (63), Expect = 8.0
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +1
Query: 193 CDALSATVGNFCMDVAIRKAQEAGVGWVGARRSNHYGMAGYWALKAEKQGLIGLSFTNSS 372
C A T G++ M R+A G+ WVG RS YG +A + + +I + S
Sbjct: 14 CTASGFTFGDYAMSW-FRQAPGKGLEWVGFIRSKDYGGTTDYAASVKGRFIISRDDSKSI 72
Query: 373 PILVPD 390
L D
Sbjct: 73 AYLQMD 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,249,837
Number of Sequences: 237096
Number of extensions: 1566498
Number of successful extensions: 3577
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3576
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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