Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5569
         (542 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49127-10|CAA88951.1|  400|Caenorhabditis elegans Hypothetical p...   131   3e-31
AL033535-3|CAA22133.1|  400|Caenorhabditis elegans Hypothetical ...   131   3e-31
Z96047-9|CAB09417.1|  372|Caenorhabditis elegans Hypothetical pr...   120   7e-28
Z81077-16|CAB03073.1|  372|Caenorhabditis elegans Hypothetical p...   120   7e-28
Z93374-8|CAB07555.1|  359|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z81462-3|CAB03842.2| 1034|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z49127-10|CAA88951.1|  400|Caenorhabditis elegans Hypothetical
           protein VF13D12L.3 protein.
          Length = 400

 Score =  131 bits (317), Expect = 3e-31
 Identities = 62/126 (49%), Positives = 83/126 (65%)
 Frame = +1

Query: 10  TRAETKAQADLLIHADTVGHYSHGT*QHWEFYINDILSKATDPCAKPVILKESAATALVD 189
           T +     A +L+  D  GHYSHG     + Y+ DI         +P+ILKE A TA VD
Sbjct: 68  TESHATQLALVLLEGDIRGHYSHGL-NRLDMYVRDIEQNVCKGDGEPIILKEKAGTAWVD 126

Query: 190 GCDALSATVGNFCMDVAIRKAQEAGVGWVGARRSNHYGMAGYWALKAEKQGLIGLSFTNS 369
           G + L   VGNFCMD+AI KA+ AG+GWV A+ SNHYG+AG++AL+A K+G++G+S TN+
Sbjct: 127 GNNLLGPVVGNFCMDLAIEKAKNAGIGWVVAKGSNHYGIAGWYALRAMKKGMLGMSMTNT 186

Query: 370 SPILVP 387
           SPI  P
Sbjct: 187 SPISFP 192



 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 26/52 (50%), Positives = 35/52 (67%)
 Frame = +2

Query: 383 YPTRSKTSALGTNPIALAAPAKNGDNLVXDLTTTAVALGKS*NTSPQRGNPV 538
           +PTRS   ALGTNPI+LAAP    D+ V D+ +T VA+GK    + ++ NPV
Sbjct: 191 FPTRSAVPALGTNPISLAAPGTGDDSFVLDMASTTVAIGKV-ELAARKENPV 241


>AL033535-3|CAA22133.1|  400|Caenorhabditis elegans Hypothetical
           protein VF13D12L.3 protein.
          Length = 400

 Score =  131 bits (317), Expect = 3e-31
 Identities = 62/126 (49%), Positives = 83/126 (65%)
 Frame = +1

Query: 10  TRAETKAQADLLIHADTVGHYSHGT*QHWEFYINDILSKATDPCAKPVILKESAATALVD 189
           T +     A +L+  D  GHYSHG     + Y+ DI         +P+ILKE A TA VD
Sbjct: 68  TESHATQLALVLLEGDIRGHYSHGL-NRLDMYVRDIEQNVCKGDGEPIILKEKAGTAWVD 126

Query: 190 GCDALSATVGNFCMDVAIRKAQEAGVGWVGARRSNHYGMAGYWALKAEKQGLIGLSFTNS 369
           G + L   VGNFCMD+AI KA+ AG+GWV A+ SNHYG+AG++AL+A K+G++G+S TN+
Sbjct: 127 GNNLLGPVVGNFCMDLAIEKAKNAGIGWVVAKGSNHYGIAGWYALRAMKKGMLGMSMTNT 186

Query: 370 SPILVP 387
           SPI  P
Sbjct: 187 SPISFP 192



 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 26/52 (50%), Positives = 35/52 (67%)
 Frame = +2

Query: 383 YPTRSKTSALGTNPIALAAPAKNGDNLVXDLTTTAVALGKS*NTSPQRGNPV 538
           +PTRS   ALGTNPI+LAAP    D+ V D+ +T VA+GK    + ++ NPV
Sbjct: 191 FPTRSAVPALGTNPISLAAPGTGDDSFVLDMASTTVAIGKV-ELAARKENPV 241


>Z96047-9|CAB09417.1|  372|Caenorhabditis elegans Hypothetical
           protein F36A2.3 protein.
          Length = 372

 Score =  120 bits (289), Expect = 7e-28
 Identities = 56/127 (44%), Positives = 82/127 (64%)
 Frame = +1

Query: 34  ADLLIHADTVGHYSHGT*QHWEFYINDILSKATDPCAKPVILKESAATALVDGCDALSAT 213
           A+ L+ +D  GHYSHG       Y++D++ K+T     P +LK   +TA VDG + L   
Sbjct: 44  AETLLCSDYRGHYSHGI-NRLHIYVHDLMMKSTAVTGTPQVLKSKGSTAWVDGNNLLGPV 102

Query: 214 VGNFCMDVAIRKAQEAGVGWVGARRSNHYGMAGYWALKAEKQGLIGLSFTNSSPILVPD* 393
           VGNFCM +A+ KA+E G+GWV  R SNH+G+AG++A  A + GL+G++FTN+SP + P  
Sbjct: 103 VGNFCMQLAVEKAKEFGIGWVVCRNSNHFGIAGWYADFACRNGLVGMAFTNTSPCVFPTG 162

Query: 394 I*NKCIG 414
              K +G
Sbjct: 163 SREKSLG 169



 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 19/40 (47%), Positives = 27/40 (67%)
 Frame = +2

Query: 383 YPTRSKTSALGTNPIALAAPAKNGDNLVXDLTTTAVALGK 502
           +PT S+  +LG+NPI +AAP   GD+   D+ +T VA GK
Sbjct: 159 FPTGSREKSLGSNPICMAAPGMEGDSFFLDMASTTVAYGK 198


>Z81077-16|CAB03073.1|  372|Caenorhabditis elegans Hypothetical
           protein F36A2.3 protein.
          Length = 372

 Score =  120 bits (289), Expect = 7e-28
 Identities = 56/127 (44%), Positives = 82/127 (64%)
 Frame = +1

Query: 34  ADLLIHADTVGHYSHGT*QHWEFYINDILSKATDPCAKPVILKESAATALVDGCDALSAT 213
           A+ L+ +D  GHYSHG       Y++D++ K+T     P +LK   +TA VDG + L   
Sbjct: 44  AETLLCSDYRGHYSHGI-NRLHIYVHDLMMKSTAVTGTPQVLKSKGSTAWVDGNNLLGPV 102

Query: 214 VGNFCMDVAIRKAQEAGVGWVGARRSNHYGMAGYWALKAEKQGLIGLSFTNSSPILVPD* 393
           VGNFCM +A+ KA+E G+GWV  R SNH+G+AG++A  A + GL+G++FTN+SP + P  
Sbjct: 103 VGNFCMQLAVEKAKEFGIGWVVCRNSNHFGIAGWYADFACRNGLVGMAFTNTSPCVFPTG 162

Query: 394 I*NKCIG 414
              K +G
Sbjct: 163 SREKSLG 169



 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 19/40 (47%), Positives = 27/40 (67%)
 Frame = +2

Query: 383 YPTRSKTSALGTNPIALAAPAKNGDNLVXDLTTTAVALGK 502
           +PT S+  +LG+NPI +AAP   GD+   D+ +T VA GK
Sbjct: 159 FPTGSREKSLGSNPICMAAPGMEGDSFFLDMASTTVAYGK 198


>Z93374-8|CAB07555.1|  359|Caenorhabditis elegans Hypothetical
           protein C06C6.5a protein.
          Length = 359

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -2

Query: 202 KRRNRPPERSQPTLSISPALHKDLLLLTGYRLYRIPNAVKSRDCN 68
           KR   PP++++P  SIS AL           + ++P+ +  RDC+
Sbjct: 73  KRERHPPKKNKPP-SISEALTSSSSTPPSLPISQLPSRIIPRDCS 116


>Z81462-3|CAB03842.2| 1034|Caenorhabditis elegans Hypothetical
           protein C04H5.3 protein.
          Length = 1034

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -3

Query: 516 LVFQLLPKATAVVVKSXTKLSPFLAGAAKAM 424
           L+FQLLPK  A+ +K+   ++P +  +A  M
Sbjct: 813 LLFQLLPKHVAIELKAGRTVAPKMYDSATVM 843


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,379,000
Number of Sequences: 27780
Number of extensions: 247285
Number of successful extensions: 611
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)