Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5569
         (542 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    27   0.093
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    27   0.093
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   1.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   1.2  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   2.7  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.1  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   8.1  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 0.093
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -2

Query: 334 FPLSMPSIQPYRNDCYVWH 278
           F LS+ +I+PY N+ Y+WH
Sbjct: 132 FQLSLKNIEPY-NNYYIWH 149


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 0.093
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -2

Query: 334 FPLSMPSIQPYRNDCYVWH 278
           F LS+ +I+PY N+ Y+WH
Sbjct: 132 FQLSLKNIEPY-NNYYIWH 149


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -3

Query: 345 ETLFFRFQCPVSS---HTVMIATSGTHPSYSRFLRLPY 241
           +T  F +  P++S    T+M +   T P  +RF  LPY
Sbjct: 283 KTAEFDWNKPINSGFYSTIMYSNGVTFPQRNRFSSLPY 320


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -3

Query: 345 ETLFFRFQCPVSS---HTVMIATSGTHPSYSRFLRLPY 241
           +T  F +  P++S    T+M +   T P  +RF  LPY
Sbjct: 283 KTAEFDWNKPINSGFYSTIMYSNGVTFPQRNRFSSLPY 320


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 469 RFNYNSGCFGQKLKYKS 519
           ++NYN+  + +KL YK+
Sbjct: 103 KYNYNNNNYNKKLYYKN 119


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 237 RDKEGAGSGSR 269
           +DK+ AGSGSR
Sbjct: 582 KDKKNAGSGSR 592


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +3

Query: 177 RSGGRLRRFKCYCRK 221
           R GG  R   C CRK
Sbjct: 90  RKGGSCRNGVCICRK 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,307
Number of Sequences: 438
Number of extensions: 2816
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)