Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5568
         (635 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069544-1|AAL39689.1|  328|Drosophila melanogaster LD27203p pro...    51   1e-06
AE013599-2451|AAF57876.1|  328|Drosophila melanogaster CG30101-P...    51   1e-06
AE014298-356|AAF45746.1|   96|Drosophila melanogaster CG17777-PA...    34   0.14 
BT010220-1|AAQ23538.1|  277|Drosophila melanogaster RH05666p pro...    34   0.19 
AY061007-1|AAL28555.1|  277|Drosophila melanogaster HL02234p pro...    34   0.19 
AE014134-2434|AAF53359.1|  277|Drosophila melanogaster CG16884-P...    34   0.19 
BT021214-1|AAX33362.1|  373|Drosophila melanogaster RH73259p pro...    32   0.57 
AE014134-2431|AAF53357.3|  373|Drosophila melanogaster CG16886-P...    32   0.57 
AY128449-1|AAM75042.1|  506|Drosophila melanogaster LD43863p pro...    31   1.3  
AE014134-1246|AAF52491.1|  506|Drosophila melanogaster CG4497-PA...    31   1.3  
AY128487-1|AAM75080.1|  170|Drosophila melanogaster RE73921p pro...    29   7.0  
AE014298-2527|AAF48701.1|  170|Drosophila melanogaster CG5010-PA...    29   7.0  
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical...    28   9.2  

>AY069544-1|AAL39689.1|  328|Drosophila melanogaster LD27203p
           protein.
          Length = 328

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 29/71 (40%), Positives = 30/71 (42%)
 Frame = +3

Query: 420 HVPYTXXXXXXXXXXXXXXXXXTVEKKVPFXXXXXXXXXXXXXXXXXXXXKVPYEVKVHV 599
           HVPYT                  VEKKVP                     K+PYEVKV V
Sbjct: 72  HVPYTVEKKIPYEVKVDVPQPYIVEKKVPVHVKEYVKVPVHVPKPYEVIKKIPYEVKVPV 131

Query: 600 DKPYEVKVKVP 632
           DKPYEVKV VP
Sbjct: 132 DKPYEVKVPVP 142



 Score = 37.9 bits (84), Expect = 0.011
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = +3

Query: 570 KVPYEVKVHVDKPYEVKVKVP 632
           KVPYEVKV VDKPY+V+V+ P
Sbjct: 224 KVPYEVKVPVDKPYKVEVEKP 244



 Score = 34.7 bits (76), Expect = 0.11
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +3

Query: 570 KVPYEVKVHVDKPYEVKVKVP 632
           K+PYEVKV V +PYEV  KVP
Sbjct: 150 KIPYEVKVPVPQPYEVIKKVP 170



 Score = 34.7 bits (76), Expect = 0.11
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +3

Query: 570 KVPYEVKVHVDKPYEVKVKVP 632
           KVPYEVK  V+KPY+V+V  P
Sbjct: 188 KVPYEVKYEVEKPYDVEVPKP 208



 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/23 (69%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = +3

Query: 570 KVPYEVKVHVD--KPYEVKVKVP 632
           KVP+EVKV V   KPYEV  KVP
Sbjct: 168 KVPHEVKVEVPVPKPYEVIKKVP 190



 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/22 (63%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
 Frame = +3

Query: 573 VPYEVKVHVDKPYEV--KVKVP 632
           VPYEVKV ++KP  V  +VKVP
Sbjct: 271 VPYEVKVPIEKPIPVYTEVKVP 292


>AE013599-2451|AAF57876.1|  328|Drosophila melanogaster CG30101-PA
           protein.
          Length = 328

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 29/71 (40%), Positives = 30/71 (42%)
 Frame = +3

Query: 420 HVPYTXXXXXXXXXXXXXXXXXTVEKKVPFXXXXXXXXXXXXXXXXXXXXKVPYEVKVHV 599
           HVPYT                  VEKKVP                     K+PYEVKV V
Sbjct: 72  HVPYTVEKKIPYEVKVDVPQPYIVEKKVPVHVKEYVKVPVHVPKPYEVIKKIPYEVKVPV 131

Query: 600 DKPYEVKVKVP 632
           DKPYEVKV VP
Sbjct: 132 DKPYEVKVPVP 142



 Score = 37.9 bits (84), Expect = 0.011
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = +3

Query: 570 KVPYEVKVHVDKPYEVKVKVP 632
           KVPYEVKV VDKPY+V+V+ P
Sbjct: 224 KVPYEVKVPVDKPYKVEVEKP 244



 Score = 34.7 bits (76), Expect = 0.11
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +3

Query: 570 KVPYEVKVHVDKPYEVKVKVP 632
           K+PYEVKV V +PYEV  KVP
Sbjct: 150 KIPYEVKVPVPQPYEVIKKVP 170



 Score = 34.7 bits (76), Expect = 0.11
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +3

Query: 570 KVPYEVKVHVDKPYEVKVKVP 632
           KVPYEVK  V+KPY+V+V  P
Sbjct: 188 KVPYEVKYEVEKPYDVEVPKP 208



 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/23 (69%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = +3

Query: 570 KVPYEVKVHVD--KPYEVKVKVP 632
           KVP+EVKV V   KPYEV  KVP
Sbjct: 168 KVPHEVKVEVPVPKPYEVIKKVP 190



 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/22 (63%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
 Frame = +3

Query: 573 VPYEVKVHVDKPYEV--KVKVP 632
           VPYEVKV ++KP  V  +VKVP
Sbjct: 271 VPYEVKVPIEKPIPVYTEVKVP 292


>AE014298-356|AAF45746.1|   96|Drosophila melanogaster CG17777-PA
           protein.
          Length = 96

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +3

Query: 81  PKAVEEKKQDKRGIYDIG-SYGGH 149
           P AV+EKK +KRGIY  G  YGG+
Sbjct: 19  PSAVDEKKTEKRGIYGFGHGYGGY 42


>BT010220-1|AAQ23538.1|  277|Drosophila melanogaster RH05666p
           protein.
          Length = 277

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +3

Query: 12  MKYTVILVASLAVVAFAKEEKGTPKAVEEKKQDKRGIYDIGSYGGH 149
           MK  + L A L   A A + +G  K   EKK DKRG+ D+G   GH
Sbjct: 1   MKVFICLAALLVASACASKTEGE-KVPLEKKLDKRGLLDLGYGYGH 45



 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +3

Query: 570 KVPYEVKVHVDKPYEVKVKVP 632
           +VP EVKV V +PYEV  KVP
Sbjct: 141 RVPVEVKVPVPQPYEVIRKVP 161



 Score = 30.3 bits (65), Expect = 2.3
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +3

Query: 573 VPYEVKVHVDKPYEVKVKVP 632
           V  +V VHVD+PY V VKVP
Sbjct: 220 VNVQVPVHVDRPYPVYVKVP 239


>AY061007-1|AAL28555.1|  277|Drosophila melanogaster HL02234p
           protein.
          Length = 277

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +3

Query: 12  MKYTVILVASLAVVAFAKEEKGTPKAVEEKKQDKRGIYDIGSYGGH 149
           MK  + L A L   A A + +G  K   EKK DKRG+ D+G   GH
Sbjct: 1   MKVFICLAALLVASACASKTEGE-KVPLEKKLDKRGLLDLGYGYGH 45



 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +3

Query: 570 KVPYEVKVHVDKPYEVKVKVP 632
           +VP EVKV V +PYEV  KVP
Sbjct: 141 RVPVEVKVPVPQPYEVIRKVP 161



 Score = 30.3 bits (65), Expect = 2.3
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +3

Query: 573 VPYEVKVHVDKPYEVKVKVP 632
           V  +V VHVD+PY V VKVP
Sbjct: 220 VNVQVPVHVDRPYPVYVKVP 239


>AE014134-2434|AAF53359.1|  277|Drosophila melanogaster CG16884-PA
           protein.
          Length = 277

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +3

Query: 12  MKYTVILVASLAVVAFAKEEKGTPKAVEEKKQDKRGIYDIGSYGGH 149
           MK  + L A L   A A + +G  K   EKK DKRG+ D+G   GH
Sbjct: 1   MKVFICLAALLVASACASKTEGE-KVPLEKKLDKRGLLDLGYGYGH 45



 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +3

Query: 570 KVPYEVKVHVDKPYEVKVKVP 632
           +VP EVKV V +PYEV  KVP
Sbjct: 141 RVPVEVKVPVPQPYEVIRKVP 161



 Score = 30.3 bits (65), Expect = 2.3
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +3

Query: 573 VPYEVKVHVDKPYEVKVKVP 632
           V  +V VHVD+PY V VKVP
Sbjct: 220 VNVQVPVHVDRPYPVYVKVP 239


>BT021214-1|AAX33362.1|  373|Drosophila melanogaster RH73259p
           protein.
          Length = 373

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +3

Query: 573 VPYEVKVHVDKPYEVKVKVP 632
           VPYEVKVHV  PY V  +VP
Sbjct: 269 VPYEVKVHVPAPYPVIKEVP 288



 Score = 29.1 bits (62), Expect = 5.3
 Identities = 16/24 (66%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
 Frame = +3

Query: 573 VPYE--VKVHVDKP--YEVKVKVP 632
           VPY+  V VHV+KP  YEVKV VP
Sbjct: 255 VPYDRPVPVHVEKPVPYEVKVHVP 278


>AE014134-2431|AAF53357.3|  373|Drosophila melanogaster CG16886-PA
           protein.
          Length = 373

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +3

Query: 573 VPYEVKVHVDKPYEVKVKVP 632
           VPYEVKVHV  PY V  +VP
Sbjct: 269 VPYEVKVHVPAPYPVIKEVP 288



 Score = 29.1 bits (62), Expect = 5.3
 Identities = 16/24 (66%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
 Frame = +3

Query: 573 VPYE--VKVHVDKP--YEVKVKVP 632
           VPY+  V VHV+KP  YEVKV VP
Sbjct: 255 VPYDRPVPVHVEKPVPYEVKVHVP 278


>AY128449-1|AAM75042.1|  506|Drosophila melanogaster LD43863p
           protein.
          Length = 506

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
 Frame = +1

Query: 424 SPIPSRRKYPMR*KCPYLS--PT---PLKRKFPLPSRNTSNTQYTYLSPTPLKR 570
           SP P+RR +  R     ++  P+   P+KRKF L    T  + ++  SP P+K+
Sbjct: 233 SPSPTRRTFATRRSMSPIAMRPSQLGPVKRKFELDDNPTQGSNWSVYSPPPVKK 286


>AE014134-1246|AAF52491.1|  506|Drosophila melanogaster CG4497-PA
           protein.
          Length = 506

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
 Frame = +1

Query: 424 SPIPSRRKYPMR*KCPYLS--PT---PLKRKFPLPSRNTSNTQYTYLSPTPLKR 570
           SP P+RR +  R     ++  P+   P+KRKF L    T  + ++  SP P+K+
Sbjct: 233 SPSPTRRTFATRRSMSPIAMRPSQLGPVKRKFELDDNPTQGSNWSVYSPPPVKK 286


>AY128487-1|AAM75080.1|  170|Drosophila melanogaster RE73921p
           protein.
          Length = 170

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 409 QSRNTSPIPS-RRKYPMR*KCPYLSPTPLKRKFPLPS 516
           + R+ SP PS RR  P++ + P  +P P++ + P P+
Sbjct: 4   RGRSASPPPSTRRTAPVQARAPAPAPAPVQTRAPAPA 40


>AE014298-2527|AAF48701.1|  170|Drosophila melanogaster CG5010-PA
           protein.
          Length = 170

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 409 QSRNTSPIPS-RRKYPMR*KCPYLSPTPLKRKFPLPS 516
           + R+ SP PS RR  P++ + P  +P P++ + P P+
Sbjct: 4   RGRSASPPPSTRRTAPVQARAPAPAPAPVQTRAPAPA 40


>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1830

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = -3

Query: 195 HSFRDRRSLHRYLRNYVLHKILCHRCPFCLVSSLRLPSVCLSPPWQRQPRPT 40
           H  RD  S+H        H  L HR P     +    S   SPP Q+ PRP+
Sbjct: 472 HQLRDCTSMHSCFTCKGRHHTLLHRSP----PNSENASSSTSPPTQQLPRPS 519


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,865,128
Number of Sequences: 53049
Number of extensions: 422526
Number of successful extensions: 1302
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)