Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5561
         (430 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain poly...    31   1.3  
U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2 pr...    31   1.3  
U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2 pr...    31   1.3  
U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy cha...    31   1.3  
X55878-1|CAA39363.1|  305|Homo sapiens clathrin heavy  chain pro...    31   1.7  
D21260-1|BAA04801.2| 1685|Homo sapiens KIAA0034 protein.               31   1.7  
BC054489-1|AAH54489.1| 1675|Homo sapiens clathrin, heavy chain (...    31   1.7  
BC051800-1|AAH51800.1| 1639|Homo sapiens CLTC protein protein.         31   1.7  

>X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain
           polypeptide protein.
          Length = 1640

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 204 YDRRNLARLNIAAGELSEPYRELPNLYDVKKSVV 305
           YDR ++A+L   AG L +      +LYD+K++VV
Sbjct: 608 YDRAHIAQLCEKAGLLQQALEHYTDLYDIKRAVV 641


>U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2
           protein.
          Length = 1569

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 204 YDRRNLARLNIAAGELSEPYRELPNLYDVKKSVV 305
           YDR ++A+L   AG L +      +LYD+K++VV
Sbjct: 608 YDRAHIAQLCEKAGLLQQALEHYTDLYDIKRAVV 641


>U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2
           protein.
          Length = 1626

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 204 YDRRNLARLNIAAGELSEPYRELPNLYDVKKSVV 305
           YDR ++A+L   AG L +      +LYD+K++VV
Sbjct: 608 YDRAHIAQLCEKAGLLQQALEHYTDLYDIKRAVV 641


>U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy chain
           protein.
          Length = 1640

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 204 YDRRNLARLNIAAGELSEPYRELPNLYDVKKSVV 305
           YDR ++A+L   AG L +      +LYD+K++VV
Sbjct: 608 YDRAHIAQLCEKAGLLQQALEHYTDLYDIKRAVV 641


>X55878-1|CAA39363.1|  305|Homo sapiens clathrin heavy  chain
           protein.
          Length = 305

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 204 YDRRNLARLNIAAGELSEPYRELPNLYDVKKSVV 305
           YDR ++A+L   AG L        +LYD+K++VV
Sbjct: 49  YDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVV 82


>D21260-1|BAA04801.2| 1685|Homo sapiens KIAA0034 protein.
          Length = 1685

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 204 YDRRNLARLNIAAGELSEPYRELPNLYDVKKSVV 305
           YDR ++A+L   AG L        +LYD+K++VV
Sbjct: 618 YDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVV 651


>BC054489-1|AAH54489.1| 1675|Homo sapiens clathrin, heavy chain (Hc)
           protein.
          Length = 1675

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 204 YDRRNLARLNIAAGELSEPYRELPNLYDVKKSVV 305
           YDR ++A+L   AG L        +LYD+K++VV
Sbjct: 608 YDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVV 641


>BC051800-1|AAH51800.1| 1639|Homo sapiens CLTC protein protein.
          Length = 1639

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 204 YDRRNLARLNIAAGELSEPYRELPNLYDVKKSVV 305
           YDR ++A+L   AG L        +LYD+K++VV
Sbjct: 608 YDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVV 641


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,186,759
Number of Sequences: 237096
Number of extensions: 765604
Number of successful extensions: 894
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)