Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5559
         (667 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U38951-1|AAB09739.1|  226|Drosophila melanogaster vacuolar ATPas...   184   1e-46
U38198-1|AAB09738.1|  226|Drosophila melanogaster V-ATPase subun...   184   1e-46
AF145618-1|AAD38593.1|  226|Drosophila melanogaster BcDNA.GH0368...   184   1e-46
AE014297-290|AAF51997.1|  226|Drosophila melanogaster CG1088-PB,...   184   1e-46
AE014297-289|AAF51998.1|  226|Drosophila melanogaster CG1088-PA,...   184   1e-46
AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA...    33   0.26 
D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein.         29   4.3  
AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p pro...    29   4.3  
AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,...    29   4.3  
AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,...    29   4.3  
BT022091-1|AAY33507.1|  432|Drosophila melanogaster RE01056p pro...    28   9.9  
BT010091-1|AAQ22560.1|  784|Drosophila melanogaster HL05804p pro...    28   9.9  
AE013599-78|AAF57331.2|  733|Drosophila melanogaster CG30437-PB,...    28   9.9  
AE013599-77|AAF57332.4|  784|Drosophila melanogaster CG30437-PA,...    28   9.9  
AE013599-76|AAN16124.1|  855|Drosophila melanogaster CG30437-PC,...    28   9.9  

>U38951-1|AAB09739.1|  226|Drosophila melanogaster vacuolar ATPase
           subunit E protein.
          Length = 226

 Score =  184 bits (447), Expect = 1e-46
 Identities = 98/180 (54%), Positives = 116/180 (64%)
 Frame = +1

Query: 109 RNSIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXXXXXXX 288
           +  IKHMMAFIEQ                FNIEKGRLVQQQRLKIM              
Sbjct: 9   QKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQK 68

Query: 289 XIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALFQLM 468
            IQSSNMLNQARLKVLKVREDHV +VLD+ARKRL EV K+   Y  +L  LIVQ LFQ+M
Sbjct: 69  KIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQGLFQIM 128

Query: 469 EPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIELVAARG 648
           EP V +R R+ D  LV ++L  A   YK +I ++V L +D ++FLS DTCGG+EL+A  G
Sbjct: 129 EPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVELLALNG 188


>U38198-1|AAB09738.1|  226|Drosophila melanogaster V-ATPase subunit
           E protein.
          Length = 226

 Score =  184 bits (447), Expect = 1e-46
 Identities = 98/180 (54%), Positives = 116/180 (64%)
 Frame = +1

Query: 109 RNSIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXXXXXXX 288
           +  IKHMMAFIEQ                FNIEKGRLVQQQRLKIM              
Sbjct: 9   QKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQK 68

Query: 289 XIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALFQLM 468
            IQSSNMLNQARLKVLKVREDHV +VLD+ARKRL EV K+   Y  +L  LIVQ LFQ+M
Sbjct: 69  KIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQGLFQIM 128

Query: 469 EPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIELVAARG 648
           EP V +R R+ D  LV ++L  A   YK +I ++V L +D ++FLS DTCGG+EL+A  G
Sbjct: 129 EPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVELLALNG 188


>AF145618-1|AAD38593.1|  226|Drosophila melanogaster BcDNA.GH03683
           protein.
          Length = 226

 Score =  184 bits (447), Expect = 1e-46
 Identities = 98/180 (54%), Positives = 116/180 (64%)
 Frame = +1

Query: 109 RNSIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXXXXXXX 288
           +  IKHMMAFIEQ                FNIEKGRLVQQQRLKIM              
Sbjct: 9   QKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQK 68

Query: 289 XIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALFQLM 468
            IQSSNMLNQARLKVLKVREDHV +VLD+ARKRL EV K+   Y  +L  LIVQ LFQ+M
Sbjct: 69  KIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQGLFQIM 128

Query: 469 EPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIELVAARG 648
           EP V +R R+ D  LV ++L  A   YK +I ++V L +D ++FLS DTCGG+EL+A  G
Sbjct: 129 EPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVELLALNG 188


>AE014297-290|AAF51997.1|  226|Drosophila melanogaster CG1088-PB,
           isoform B protein.
          Length = 226

 Score =  184 bits (447), Expect = 1e-46
 Identities = 98/180 (54%), Positives = 116/180 (64%)
 Frame = +1

Query: 109 RNSIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXXXXXXX 288
           +  IKHMMAFIEQ                FNIEKGRLVQQQRLKIM              
Sbjct: 9   QKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQK 68

Query: 289 XIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALFQLM 468
            IQSSNMLNQARLKVLKVREDHV +VLD+ARKRL EV K+   Y  +L  LIVQ LFQ+M
Sbjct: 69  KIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQGLFQIM 128

Query: 469 EPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIELVAARG 648
           EP V +R R+ D  LV ++L  A   YK +I ++V L +D ++FLS DTCGG+EL+A  G
Sbjct: 129 EPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVELLALNG 188


>AE014297-289|AAF51998.1|  226|Drosophila melanogaster CG1088-PA,
           isoform A protein.
          Length = 226

 Score =  184 bits (447), Expect = 1e-46
 Identities = 98/180 (54%), Positives = 116/180 (64%)
 Frame = +1

Query: 109 RNSIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXXXXXXX 288
           +  IKHMMAFIEQ                FNIEKGRLVQQQRLKIM              
Sbjct: 9   QKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQK 68

Query: 289 XIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALFQLM 468
            IQSSNMLNQARLKVLKVREDHV +VLD+ARKRL EV K+   Y  +L  LIVQ LFQ+M
Sbjct: 69  KIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQGLFQIM 128

Query: 469 EPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIELVAARG 648
           EP V +R R+ D  LV ++L  A   YK +I ++V L +D ++FLS DTCGG+EL+A  G
Sbjct: 129 EPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVELLALNG 188


>AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA
           protein.
          Length = 841

 Score = 33.5 bits (73), Expect = 0.26
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +3

Query: 465 HGTHCHHPRPSNRQGSGGVPARKSPNRLQE*DQEGCCVESRHRKL 599
           H  H  H R S RQGSG +P     +      +   C   RHR +
Sbjct: 178 HSHHSRHSRRSRRQGSGSLPGAHQGSANHSVMRPSICTSRRHRSV 222


>D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein.
          Length = 1893

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
 Frame = +1

Query: 316  QARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALF-----QLMEPTV 480
            + R K L++R +H+R   ++    L+++   + +  E L TLI++  F     +L E   
Sbjct: 1428 EEREKDLEMRREHIRQWREQQISELSQIVSRSPMQEEQLKTLILERDFERRAQELQEQEE 1487

Query: 481  TIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTE 594
              + +Q DK  V+ L   A     + I+  +     TE
Sbjct: 1488 QDQEQQYDKENVQELFRLAGGGQVSAIQTPITSYRQTE 1525


>AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p protein.
          Length = 2051

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
 Frame = +1

Query: 316  QARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALF-----QLMEPTV 480
            + R K L++R +H+R   ++    L+++   + +  E L TLI++  F     +L E   
Sbjct: 1586 EEREKDLEMRREHIRQWREQQISELSQIVSRSPMQEEQLKTLILERDFERRAQELQEQEE 1645

Query: 481  TIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTE 594
              + +Q DK  V+ L   A     + I+  +     TE
Sbjct: 1646 QDQEQQYDKENVQELFRLAGGGQVSAIQTPITSYRQTE 1683


>AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,
            isoform A protein.
          Length = 2051

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
 Frame = +1

Query: 316  QARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALF-----QLMEPTV 480
            + R K L++R +H+R   ++    L+++   + +  E L TLI++  F     +L E   
Sbjct: 1586 EEREKDLEMRREHIRQWREQQISELSQIVSRSPMQEEQLKTLILERDFERRAQELQEQEE 1645

Query: 481  TIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTE 594
              + +Q DK  V+ L   A     + I+  +     TE
Sbjct: 1646 QDQEQQYDKENVQELFRLAGGGQVSAIQTPITSYRQTE 1683


>AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,
            isoform B protein.
          Length = 1882

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
 Frame = +1

Query: 316  QARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALF-----QLMEPTV 480
            + R K L++R +H+R   ++    L+++   + +  E L TLI++  F     +L E   
Sbjct: 1417 EEREKDLEMRREHIRQWREQQISELSQIVSRSPMQEEQLKTLILERDFERRAQELQEQEE 1476

Query: 481  TIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTE 594
              + +Q DK  V+ L   A     + I+  +     TE
Sbjct: 1477 QDQEQQYDKENVQELFRLAGGGQVSAIQTPITSYRQTE 1514


>BT022091-1|AAY33507.1|  432|Drosophila melanogaster RE01056p
           protein.
          Length = 432

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 365 YLTKLASAWLKCQRTPNCTQSCWSHLLC 448
           Y T L +A   C  TPN T + WSH  C
Sbjct: 166 YYTVLGAACQVC--TPNATNTVWSHCQC 191


>BT010091-1|AAQ22560.1|  784|Drosophila melanogaster HL05804p
           protein.
          Length = 784

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 365 YLTKLASAWLKCQRTPNCTQSCWSHLLC 448
           Y T L +A   C  TPN T + WSH  C
Sbjct: 201 YYTVLGAACQVC--TPNATNTVWSHCQC 226


>AE013599-78|AAF57331.2|  733|Drosophila melanogaster CG30437-PB,
           isoform B protein.
          Length = 733

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 365 YLTKLASAWLKCQRTPNCTQSCWSHLLC 448
           Y T L +A   C  TPN T + WSH  C
Sbjct: 150 YYTVLGAACQVC--TPNATNTVWSHCQC 175


>AE013599-77|AAF57332.4|  784|Drosophila melanogaster CG30437-PA,
           isoform A protein.
          Length = 784

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 365 YLTKLASAWLKCQRTPNCTQSCWSHLLC 448
           Y T L +A   C  TPN T + WSH  C
Sbjct: 201 YYTVLGAACQVC--TPNATNTVWSHCQC 226


>AE013599-76|AAN16124.1|  855|Drosophila melanogaster CG30437-PC,
           isoform C protein.
          Length = 855

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 365 YLTKLASAWLKCQRTPNCTQSCWSHLLC 448
           Y T L +A   C  TPN T + WSH  C
Sbjct: 201 YYTVLGAACQVC--TPNATNTVWSHCQC 226


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,826,532
Number of Sequences: 53049
Number of extensions: 589210
Number of successful extensions: 1910
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1905
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)