Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5558
(415 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 73 8e-14
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 73 8e-14
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 73 8e-14
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 73 8e-14
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 73 8e-14
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 68 2e-12
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 38 0.002
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 36 0.009
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 36 0.009
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 36 0.012
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 36 0.012
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 36 0.012
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 36 0.012
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 36 0.015
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 36 0.015
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 36 0.015
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 36 0.015
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 36 0.015
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.020
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.020
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 35 0.020
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 35 0.020
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 35 0.020
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 35 0.027
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 35 0.027
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 35 0.027
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 34 0.047
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 34 0.047
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 34 0.047
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 34 0.047
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 34 0.047
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 33 0.082
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 33 0.082
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 33 0.11
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 33 0.11
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 33 0.11
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 33 0.11
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 33 0.11
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 32 0.19
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 32 0.19
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 32 0.19
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.19
AF022977-3|AAB88609.1| 554|Caenorhabditis elegans Hypothetical ... 31 0.25
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 31 0.25
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 31 0.33
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 31 0.33
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 31 0.33
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 31 0.33
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 31 0.33
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 31 0.33
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 31 0.33
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 31 0.44
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 31 0.44
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 30 0.58
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 30 0.76
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 29 1.0
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 29 1.0
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 29 1.0
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 29 1.0
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 29 1.0
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 29 1.0
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 29 1.8
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 29 1.8
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z81142-8|CAO82053.1| 370|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 27 5.4
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 27 5.4
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 27 7.1
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 27 7.1
Z73427-7|CAA97799.1| 371|Caenorhabditis elegans Hypothetical pr... 27 7.1
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 27 7.1
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 27 7.1
AL132951-11|CAN86614.1| 502|Caenorhabditis elegans Hypothetical... 27 7.1
AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin ... 27 7.1
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 27 7.1
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 27 7.1
Z81114-3|CAB03289.1| 664|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical p... 26 9.4
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 26 9.4
U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical pr... 26 9.4
U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical pr... 26 9.4
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 26 9.4
AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA s... 26 9.4
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 26 9.4
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 26 9.4
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 72.9 bits (171), Expect = 8e-14
Identities = 34/91 (37%), Positives = 57/91 (62%)
Frame = +1
Query: 139 KPPAPKNELNSKPLTFDEVYNQSSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVF 318
KP + + ++DE+YNQ+SG N +VY G + + LTE+ +++ FG I E+R+F
Sbjct: 101 KPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIF 159
Query: 319 KDKGYALMRFWTKESGTHAIDAVHNTDMNGQ 411
K +GYA ++F K++ AI ++N D+ GQ
Sbjct: 160 KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 190
Score = 72.5 bits (170), Expect = 1e-13
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D T KSKGYGFVSY K+ EAE AI MNGQWLG R+IRTNWA
Sbjct: 56 DTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWA 98
Score = 35.9 bits (79), Expect = 0.012
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNW 128
K +GY FV + K A AI MN Q +G + +R +W
Sbjct: 160 KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSW 196
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 72.9 bits (171), Expect = 8e-14
Identities = 34/91 (37%), Positives = 57/91 (62%)
Frame = +1
Query: 139 KPPAPKNELNSKPLTFDEVYNQSSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVF 318
KP + + ++DE+YNQ+SG N +VY G + + LTE+ +++ FG I E+R+F
Sbjct: 111 KPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIF 169
Query: 319 KDKGYALMRFWTKESGTHAIDAVHNTDMNGQ 411
K +GYA ++F K++ AI ++N D+ GQ
Sbjct: 170 KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 200
Score = 72.5 bits (170), Expect = 1e-13
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D T KSKGYGFVSY K+ EAE AI MNGQWLG R+IRTNWA
Sbjct: 66 DTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWA 108
Score = 35.9 bits (79), Expect = 0.012
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNW 128
K +GY FV + K A AI MN Q +G + +R +W
Sbjct: 170 KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSW 206
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 72.9 bits (171), Expect = 8e-14
Identities = 34/91 (37%), Positives = 57/91 (62%)
Frame = +1
Query: 139 KPPAPKNELNSKPLTFDEVYNQSSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVF 318
KP + + ++DE+YNQ+SG N +VY G + + LTE+ +++ FG I E+R+F
Sbjct: 214 KPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIF 272
Query: 319 KDKGYALMRFWTKESGTHAIDAVHNTDMNGQ 411
K +GYA ++F K++ AI ++N D+ GQ
Sbjct: 273 KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 303
Score = 72.5 bits (170), Expect = 1e-13
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D T KSKGYGFVSY K+ EAE AI MNGQWLG R+IRTNWA
Sbjct: 169 DTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWA 211
Score = 35.9 bits (79), Expect = 0.012
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNW 128
K +GY FV + K A AI MN Q +G + +R +W
Sbjct: 273 KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSW 309
Score = 30.3 bits (65), Expect = 0.58
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 30 YGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
Y FV + +A A+ +MN + L R ++ NWA
Sbjct: 86 YAFVEFSDHGQASQALQTMNKRLLLDREMKVNWA 119
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 72.9 bits (171), Expect = 8e-14
Identities = 34/91 (37%), Positives = 57/91 (62%)
Frame = +1
Query: 139 KPPAPKNELNSKPLTFDEVYNQSSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVF 318
KP + + ++DE+YNQ+SG N +VY G + + LTE+ +++ FG I E+R+F
Sbjct: 182 KPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIF 240
Query: 319 KDKGYALMRFWTKESGTHAIDAVHNTDMNGQ 411
K +GYA ++F K++ AI ++N D+ GQ
Sbjct: 241 KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 271
Score = 72.5 bits (170), Expect = 1e-13
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D T KSKGYGFVSY K+ EAE AI MNGQWLG R+IRTNWA
Sbjct: 137 DTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWA 179
Score = 35.9 bits (79), Expect = 0.012
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNW 128
K +GY FV + K A AI MN Q +G + +R +W
Sbjct: 241 KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSW 277
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 72.9 bits (171), Expect = 8e-14
Identities = 33/82 (40%), Positives = 51/82 (62%)
Frame = +1
Query: 166 NSKPLTFDEVYNQSSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKDKGYALMR 345
N T+DE++NQ++ N +VY G + L E+ +++ FG I E+R FK +GYA ++
Sbjct: 238 NQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVRTFKIQGYAFVK 296
Query: 346 FWTKESGTHAIDAVHNTDMNGQ 411
F TKES AI ++N D+ GQ
Sbjct: 297 FETKESAARAIVQMNNADIGGQ 318
Score = 64.9 bits (151), Expect = 2e-11
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D T K KGYGFVSY ++ +AE AI MNG WLG R+IRTNWA
Sbjct: 166 DNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWA 208
Score = 35.9 bits (79), Expect = 0.012
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 9 QTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNW 128
+T K +GY FV + K A AI MN +G + +R +W
Sbjct: 285 RTFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSW 324
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +1
Query: 226 VYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKD------KGYALMRFWTKESGTHAIDAV 387
V+ G L + + +++ FG + E ++ +D KGY + + +E AID +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 388 H 390
+
Sbjct: 194 N 194
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 30 YGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
Y FV + ++A A+ S NG+ L + + WA
Sbjct: 80 YAFVEFSDHNQATLALQSHNGRELLEKEMHVTWA 113
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 68.1 bits (159), Expect = 2e-12
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D QT KSKGYGFVS+ K AE+AI MNG+W+G R++RTNWA
Sbjct: 169 DVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWA 211
Score = 62.1 bits (144), Expect = 2e-10
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +1
Query: 148 APKN-ELNSKPLTFDEVYNQSSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKD 324
A KN E N LTF++V+N + N +VY G ++ T+ ++ +G I E+R+FK
Sbjct: 212 ARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKT 271
Query: 325 KGYALMRFWTKESGTHAIDAVHNTDMNG 408
+ YA +R+ KE T AI ++ +M G
Sbjct: 272 QRYAFVRYEKKECATKAIMEMNGKEMAG 299
Score = 35.1 bits (77), Expect = 0.020
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNW 128
K++ Y FV Y KK A AI MNG+ + +R +W
Sbjct: 270 KTQRYAFVRYEKKECATKAIMEMNGKEMAGNQVRCSW 306
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/43 (39%), Positives = 31/43 (72%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D T +S GYGFV+Y+++ +A A++S NG L +++I+ ++A
Sbjct: 76 DKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYA 118
Score = 32.3 bits (70), Expect = 0.14
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNG 92
D T SKG GFV + KK EA+ AI ++NG
Sbjct: 162 DNVTGLSKGVGFVRFDKKDEADVAIKTLNG 191
Score = 30.7 bits (66), Expect = 0.44
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 12 TLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
T + KGY FVS +EA +A+ S+NG L ++++
Sbjct: 410 TQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQ 445
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
+ +T KSKGYGFVS+ + A+ M+G+++G+R I+
Sbjct: 237 ESRTNKSKGYGFVSFRDSEDYVRAMREMDGKYVGNRPIK 275
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 37.5 bits (83), Expect = 0.004
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
+SKG+GFV + K EA +A+T MN + +G++ +
Sbjct: 381 RSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPL 413
Score = 32.3 bits (70), Expect = 0.14
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
SKGYGFV + + A++AI +NG L + +
Sbjct: 184 SKGYGFVHFETEHSAQTAIEKVNGMLLSDKKV 215
Score = 31.1 bits (67), Expect = 0.33
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
S GY +V++ + ++AE A+ +MN + + R +R W+
Sbjct: 97 SLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWS 133
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +1
Query: 214 SNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKDK------GYALMRFWTKESGTHA 375
S ++Y G L ++E ++ + G + IRV +D GYA + F A
Sbjct: 55 SMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERA 114
Query: 376 IDAVHNTDMNGQP 414
+D ++ ++G+P
Sbjct: 115 LDTMNFEVIHGRP 127
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 37.5 bits (83), Expect = 0.004
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
+SKG+GFV + K EA +A+T MN + +G++ +
Sbjct: 381 RSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPL 413
Score = 32.3 bits (70), Expect = 0.14
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
SKGYGFV + + A++AI +NG L + +
Sbjct: 184 SKGYGFVHFETEHSAQTAIEKVNGMLLSDKKV 215
Score = 31.1 bits (67), Expect = 0.33
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
S GY +V++ + ++AE A+ +MN + + R +R W+
Sbjct: 97 SLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWS 133
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +1
Query: 214 SNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKDK------GYALMRFWTKESGTHA 375
S ++Y G L ++E ++ + G + IRV +D GYA + F A
Sbjct: 55 SMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERA 114
Query: 376 IDAVHNTDMNGQP 414
+D ++ ++G+P
Sbjct: 115 LDTMNFEVIHGRP 127
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 36.3 bits (80), Expect = 0.009
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D +T K KGYGF+ + AE AI ++NG L R +R + A
Sbjct: 52 DRETGKPKGYGFIEFPDIQTAEVAIRNLNGYELSGRILRVDSA 94
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 36.3 bits (80), Expect = 0.009
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Frame = +1
Query: 223 TVYCGGLTTGLTEELMQKTLQPFGTIQEIRV------FKDKGYALMRFWTKESGTHAIDA 384
T+Y GG T +TE+++ PFG + I + K +G+ + F E AID
Sbjct: 12 TLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDN 71
Query: 385 VHNTDMNGQ 411
++ +++ G+
Sbjct: 72 MNESELFGK 80
Score = 33.1 bits (72), Expect = 0.082
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D ++ K +G+GFV + +A AI +MN L ++IR N+A
Sbjct: 45 DYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFA 87
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 35.9 bits (79), Expect = 0.012
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
+SKG+GFV + K EA SA+T MN + + S+ +
Sbjct: 355 RSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPL 387
Score = 32.3 bits (70), Expect = 0.14
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
SKGYGFV + + A++AI +NG L + +
Sbjct: 159 SKGYGFVHFETEEAAQNAIQKVNGMLLAGKKV 190
Score = 31.9 bits (69), Expect = 0.19
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D T S GY +V++ + ++AE A+ +MN + L + +R W+
Sbjct: 66 DNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWS 108
Score = 30.7 bits (66), Expect = 0.44
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +1
Query: 205 SSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKDK------GYALMRFWTKESG 366
SS + ++Y G L + E ++ + G + IRV +D GYA + F
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 367 THAIDAVHNTDMNGQP 414
A+D ++ ++G+P
Sbjct: 87 ERAMDTMNFEALHGKP 102
Score = 30.7 bits (66), Expect = 0.44
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +1
Query: 226 VYCGGLTTGLTEELMQKTLQPFGTIQEIRVF----KDKGYALMRFWTKESGTHAIDAVHN 393
VY +E ++K FG I V K KG+ + F E A+ A+H+
Sbjct: 215 VYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 394 TDMNG 408
+ + G
Sbjct: 275 STIEG 279
Score = 30.7 bits (66), Expect = 0.44
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMN 89
KSKG+GFV++ EAE+A+ +++
Sbjct: 250 KSKGFGFVAFANPEEAETAVQALH 273
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 35.9 bits (79), Expect = 0.012
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
+SKG+GFV + K EA SA+T MN + + S+ +
Sbjct: 295 RSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPL 327
Score = 31.9 bits (69), Expect = 0.19
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D T S GY +V++ + ++AE A+ +MN + L + +R W+
Sbjct: 66 DNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWS 108
Score = 30.7 bits (66), Expect = 0.44
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +1
Query: 205 SSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKDK------GYALMRFWTKESG 366
SS + ++Y G L + E ++ + G + IRV +D GYA + F
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 367 THAIDAVHNTDMNGQP 414
A+D ++ ++G+P
Sbjct: 87 ERAMDTMNFEALHGKP 102
Score = 30.7 bits (66), Expect = 0.44
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMN 89
KSKG+GFV++ EAE+A+ +++
Sbjct: 190 KSKGFGFVAFANPEEAETAVQALH 213
Score = 30.3 bits (65), Expect = 0.58
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +1
Query: 226 VYCGGLTTGLTEELMQKTLQPFGTIQEIRVF----KDKGYALMRFWTKESGTHAIDAVHN 393
VY +E ++K FG I V K KG+ + F E A+ A+H+
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 214
Query: 394 TDMNG 408
+ + G
Sbjct: 215 STIEG 219
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 35.9 bits (79), Expect = 0.012
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
+SKG+GFV + K EA SA+T MN + + S+ +
Sbjct: 292 RSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPL 324
Score = 32.3 bits (70), Expect = 0.14
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
SKGYGFV + + A++AI +NG L + +
Sbjct: 96 SKGYGFVHFETEEAAQNAIQKVNGMLLAGKKV 127
Score = 30.7 bits (66), Expect = 0.44
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMN 89
KSKG+GFV++ EAE+A+ +++
Sbjct: 187 KSKGFGFVAFANPEEAETAVQALH 210
Score = 30.3 bits (65), Expect = 0.58
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +1
Query: 226 VYCGGLTTGLTEELMQKTLQPFGTIQEIRVF----KDKGYALMRFWTKESGTHAIDAVHN 393
VY +E ++K FG I V K KG+ + F E A+ A+H+
Sbjct: 152 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 211
Query: 394 TDMNG 408
+ + G
Sbjct: 212 STIEG 216
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 35.9 bits (79), Expect = 0.012
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
+SKG+GFV + K EA SA+T MN + + S+ +
Sbjct: 355 RSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPL 387
Score = 32.3 bits (70), Expect = 0.14
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
SKGYGFV + + A++AI +NG L + +
Sbjct: 159 SKGYGFVHFETEEAAQNAIQKVNGMLLAGKKV 190
Score = 31.9 bits (69), Expect = 0.19
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D T S GY +V++ + ++AE A+ +MN + L + +R W+
Sbjct: 66 DNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWS 108
Score = 30.7 bits (66), Expect = 0.44
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +1
Query: 205 SSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKDK------GYALMRFWTKESG 366
SS + ++Y G L + E ++ + G + IRV +D GYA + F
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 367 THAIDAVHNTDMNGQP 414
A+D ++ ++G+P
Sbjct: 87 ERAMDTMNFEALHGKP 102
Score = 30.7 bits (66), Expect = 0.44
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMN 89
KSKG+GFV++ EAE+A+ +++
Sbjct: 250 KSKGFGFVAFANPEEAETAVQALH 273
Score = 30.3 bits (65), Expect = 0.58
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +1
Query: 226 VYCGGLTTGLTEELMQKTLQPFGTIQEIRVF----KDKGYALMRFWTKESGTHAIDAVHN 393
VY +E ++K FG I V K KG+ + F E A+ A+H+
Sbjct: 215 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 394 TDMNG 408
+ + G
Sbjct: 275 STIEG 279
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 35.5 bits (78), Expect = 0.015
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
D T SK +GFVSY A +AI++MNG +GS+ ++
Sbjct: 369 DKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLK 407
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 35.5 bits (78), Expect = 0.015
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
D T SK +GFVSY A +AI++MNG +GS+ ++
Sbjct: 533 DKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLK 571
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 35.5 bits (78), Expect = 0.015
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
D T SK +GFVSY A +AI++MNG +GS+ ++
Sbjct: 533 DKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLK 571
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 35.5 bits (78), Expect = 0.015
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
D T SK +GFVSY A +AI++MNG +GS+ ++
Sbjct: 462 DKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLK 500
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 35.5 bits (78), Expect = 0.015
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
D T SK +GFVSY A +AI++MNG +GS+ ++
Sbjct: 533 DKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLK 571
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.020
Identities = 13/37 (35%), Positives = 27/37 (72%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
SKG+ F+++ +++A+ +MNGQ+L +R+I ++A
Sbjct: 141 SKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYA 177
Score = 31.9 bits (69), Expect = 0.19
Identities = 16/72 (22%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +1
Query: 217 NCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKDK------GYALMRFWTKESGTHAI 378
+ T+Y GGL ++E ++ + + G + + + KD+ G+ + F +E +AI
Sbjct: 12 DATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAI 71
Query: 379 DAVHNTDMNGQP 414
++ + G+P
Sbjct: 72 KILNMIKLYGKP 83
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.020
Identities = 13/37 (35%), Positives = 27/37 (72%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
SKG+ F+++ +++A+ +MNGQ+L +R+I ++A
Sbjct: 151 SKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYA 187
Score = 31.9 bits (69), Expect = 0.19
Identities = 16/72 (22%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +1
Query: 217 NCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKDK------GYALMRFWTKESGTHAI 378
+ T+Y GGL ++E ++ + + G + + + KD+ G+ + F +E +AI
Sbjct: 22 DATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAI 81
Query: 379 DAVHNTDMNGQP 414
++ + G+P
Sbjct: 82 KILNMIKLYGKP 93
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 35.1 bits (77), Expect = 0.020
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTN 125
DP T K + FV Y A A SMNGQ LG R+++ N
Sbjct: 136 DPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVN 176
Score = 31.9 bits (69), Expect = 0.19
Identities = 16/80 (20%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 190 EVYNQSSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKD------KGYALMRFW 351
++Y+Q+ +Y G ++ + E+++++ PFG I+ I + D K +A + +
Sbjct: 92 QMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Query: 352 TKESGTHAIDAVHNTDMNGQ 411
E+ A ++++ + G+
Sbjct: 152 VPEAALLAQESMNGQMLGGR 171
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 35.1 bits (77), Expect = 0.020
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTN 125
DP T K + FV Y A A SMNGQ LG R+++ N
Sbjct: 136 DPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVN 176
Score = 31.9 bits (69), Expect = 0.19
Identities = 16/80 (20%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 190 EVYNQSSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKD------KGYALMRFW 351
++Y+Q+ +Y G ++ + E+++++ PFG I+ I + D K +A + +
Sbjct: 92 QMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Query: 352 TKESGTHAIDAVHNTDMNGQ 411
E+ A ++++ + G+
Sbjct: 152 VPEAALLAQESMNGQMLGGR 171
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 35.1 bits (77), Expect = 0.020
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTN 125
DP T K + FV Y A A SMNGQ LG R+++ N
Sbjct: 136 DPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVN 176
Score = 31.9 bits (69), Expect = 0.19
Identities = 16/80 (20%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 190 EVYNQSSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKD------KGYALMRFW 351
++Y+Q+ +Y G ++ + E+++++ PFG I+ I + D K +A + +
Sbjct: 92 QMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Query: 352 TKESGTHAIDAVHNTDMNGQ 411
E+ A ++++ + G+
Sbjct: 152 VPEAALLAQESMNGQMLGGR 171
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 34.7 bits (76), Expect = 0.027
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
D T +SK +GFVSY +++AIT+MNG +G + ++
Sbjct: 463 DRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLK 501
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 34.7 bits (76), Expect = 0.027
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D +T + +G+ FV + +++ A+ A+ +NG R++R N+A
Sbjct: 40 DRETGRPRGFAFVEFSEEAGAQRAVEQLNGVAFNGRNLRVNYA 82
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 34.7 bits (76), Expect = 0.027
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
D T +SK +GFVSY +++AIT+MNG +G + ++
Sbjct: 463 DRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLK 501
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 33.9 bits (74), Expect = 0.047
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = +1
Query: 202 QSSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKD------KGYALMRFWTKES 363
Q S V+ + TE+ + +G I+ I + D KGYAL+ + T++
Sbjct: 49 QRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKE 108
Query: 364 GTHAIDAVHNTDMNGQ 411
AID ++TD+ GQ
Sbjct: 109 ANEAIDQSNDTDLLGQ 124
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNW 128
D +T KGY V Y + EA AI N L ++++ +W
Sbjct: 89 DRRTGFLKGYALVEYETQKEANEAIDQSNDTDLLGQNVKVDW 130
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 33.9 bits (74), Expect = 0.047
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D + +SKG+GFV + ++ +AE A+ +G+ + R +R A
Sbjct: 53 DKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLA 95
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Frame = +1
Query: 268 MQKTLQPFGTIQEIRVFKDK------GYALMRFWTKESGTHAIDAVHNTDMNGQ 411
+++T + +G I ++ + +DK G+ +RF+ + HA+D ++G+
Sbjct: 35 LRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGR 88
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 33.9 bits (74), Expect = 0.047
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D + +SKG+GFV + ++ +AE A+ +G+ + R +R A
Sbjct: 53 DKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLA 95
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Frame = +1
Query: 268 MQKTLQPFGTIQEIRVFKDK------GYALMRFWTKESGTHAIDAVHNTDMNGQ 411
+++T + +G I ++ + +DK G+ +RF+ + HA+D ++G+
Sbjct: 35 LRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGR 88
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 33.9 bits (74), Expect = 0.047
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = +1
Query: 187 DEVYNQSSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKDKGYALMRFWTKESG 366
DEV + C ++ G L + E +++ P G I E KG+A +R T+
Sbjct: 105 DEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-YLSGKGFAFLRLDTRAHA 163
Query: 367 THAIDAVHNTDMNGQ 411
A +A+ ++G+
Sbjct: 164 ESAKEAIDGRIIHGR 178
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 15 LKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
L KG+ F+ ++ AESA +++G+ + R +R +A
Sbjct: 147 LSGKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.9 bits (74), Expect = 0.047
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = +1
Query: 187 DEVYNQSSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKDKGYALMRFWTKESG 366
DEV + C ++ G L + E +++ P G I E KG+A +R T+
Sbjct: 105 DEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-YLSGKGFAFLRLDTRAHA 163
Query: 367 THAIDAVHNTDMNGQ 411
A +A+ ++G+
Sbjct: 164 ESAKEAIDGRIIHGR 178
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 15 LKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
L KG+ F+ ++ AESA +++G+ + R +R +A
Sbjct: 147 LSGKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFA 185
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 33.1 bits (72), Expect = 0.082
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +1
Query: 223 TVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKDK------GYALMRFWTKESGTHAIDA 384
+VY G TEE + G I +R+ D+ G+A + F + S A++
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 385 VHNTDMNGQP 414
++ + NG+P
Sbjct: 66 MNGAEFNGRP 75
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 33.1 bits (72), Expect = 0.082
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +1
Query: 223 TVYCGGLTTGLTEELMQKTLQPF----GTIQEIRVFKDKGYALMRFWTKESGTHAIDAVH 390
T+Y G L +++ +K L F G I+ +RV +KG A + F T+E+ A +
Sbjct: 236 TLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTEKGCAFIEFTTREAAERAAERSF 295
Query: 391 N 393
N
Sbjct: 296 N 296
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
SKGY F YL + + AI +NG LG + +
Sbjct: 330 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQL 361
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
SKGY F YL + + AI +NG LG + +
Sbjct: 330 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQL 361
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
SKGY F YL + + AI +NG LG + +
Sbjct: 305 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQL 336
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
SKGY F YL + + AI +NG LG + +
Sbjct: 308 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQL 339
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 27 GYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
GYGFV + ++ A+ I M+G+ L + I +WA
Sbjct: 131 GYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWA 165
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 31.9 bits (69), Expect = 0.19
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
DP+T G+GF+ +++K++AE N + RS+ +WA
Sbjct: 132 DPKTCA--GFGFIQFVEKADAEKGREFFNTNKVLGRSVAADWA 172
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 31.9 bits (69), Expect = 0.19
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 15 LKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
L G+GFV + K +AE A+ +NG+ LG +
Sbjct: 33 LLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERV 66
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 31.9 bits (69), Expect = 0.19
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 15 LKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
L G+GFV + K +AE A+ +NG+ LG +
Sbjct: 33 LLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERV 66
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 31.9 bits (69), Expect = 0.19
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 15 LKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
L G+GFV + K +AE A+ +NG+ LG +
Sbjct: 33 LLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERV 66
>AF022977-3|AAB88609.1| 554|Caenorhabditis elegans Hypothetical
protein ZK994.1 protein.
Length = 554
Score = 31.5 bits (68), Expect = 0.25
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -2
Query: 309 DLLNSSEWLQGLLHQFFGQSGGQTSTVHRAIAT-GALIVDLVESQRLGVQFILRSRWFYL 133
D++ W+ + F G S T HR+ AT GA++ L ES+ L Q IL S Y+
Sbjct: 186 DVIEGCNWVDREIGNFGGDSSKITYFGHRSGATIGAILSLLPESENLFHQMILMSTPLYM 245
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 31.5 bits (68), Expect = 0.25
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +1
Query: 223 TVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKDKGYAL---MRFWTKESGTHAIDAVHN 393
TVY L G +EE + + +GT+ E+R+ K G + F + SG H
Sbjct: 820 TVYVDNLPEGCSEEKLLRLCSCYGTVVEVRISKKGGRWIRPKQNFKKRTSGVSTNRQAHR 879
Query: 394 TDMNGQP 414
T +P
Sbjct: 880 TPPKKKP 886
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 31.1 bits (67), Expect = 0.33
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
SKG+GFV+ + +AE A ++G + R I N A
Sbjct: 191 SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCA 227
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 31.1 bits (67), Expect = 0.33
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
SKG+GFV+ + +AE A ++G + R I N A
Sbjct: 191 SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCA 227
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 31.1 bits (67), Expect = 0.33
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAI 77
DP T +S+G+GFV++ K+E ++A+
Sbjct: 57 DPTTKRSRGFGFVTFSGKTEVDAAM 81
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 31.1 bits (67), Expect = 0.33
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAI 77
DP T +S+G+GFV++ K+E ++A+
Sbjct: 19 DPTTKRSRGFGFVTFSGKTEVDAAM 43
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 31.1 bits (67), Expect = 0.33
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAI 77
DP T +S+G+GFV++ K+E ++A+
Sbjct: 19 DPTTKRSRGFGFVTFSGKTEVDAAM 43
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 31.1 bits (67), Expect = 0.33
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAI 77
DP T +S+G+GFV++ K+E ++A+
Sbjct: 57 DPTTKRSRGFGFVTFSGKTEVDAAM 81
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 31.1 bits (67), Expect = 0.33
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAI 77
DP T +S+G+GFV++ K+E ++A+
Sbjct: 57 DPTTKRSRGFGFVTFSGKTEVDAAM 81
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 30.7 bits (66), Expect = 0.44
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Frame = +1
Query: 214 SNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKDK------GYALMRFWTKESGTHA 375
S +VY G TE+ + G + +R+ D+ G+A + F + + A
Sbjct: 2 SGFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRA 61
Query: 376 IDAVHNTDMNGQ 411
+D + D NG+
Sbjct: 62 VDQFNGVDFNGR 73
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 154 KNELNSKPLTFDEVYNQSSGSNCTVYCGGL 243
+ + N+ L D V +SSGS+ ++YC GL
Sbjct: 1204 EGDANTPQLQLDAVLGESSGSSLSIYCRGL 1233
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 30.3 bits (65), Expect = 0.58
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNG 92
DP + S+GY FV+Y K +A +A + +G
Sbjct: 234 DPMSGASRGYAFVTYCNKEDAAAAAKTYDG 263
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.9 bits (64), Expect = 0.76
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 24 KGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
KG+ +V++ + + +AI+ +NG G+R ++ N A
Sbjct: 53 KGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRA 88
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
SKG+GFV+ +A+ A NG + R + N A
Sbjct: 20 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 56
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
SKG+GFV+ +A+ A NG + R + N A
Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 174
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTN 125
D T KSKG+ F+ Y + A+ + NG L R IR +
Sbjct: 72 DKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRMIRVD 112
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 196 YNQSSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKD------KGYALMRFWTK 357
++Q+ + +Y GGL+ L+E + +G + I + +D KG+A + + +
Sbjct: 30 WHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQ 89
Query: 358 ESGTHAID 381
S A+D
Sbjct: 90 RSTILAVD 97
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
SKG+GFV+ +A+ A NG + R + N A
Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 174
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
DP T S+G+GFV++ AESA+ + LG +++
Sbjct: 83 DPNTKHSRGFGFVTFASIFSAESAMNDRPHK-LGGKTV 119
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
DP T S+G+GFV++ AESA+ + LG +++
Sbjct: 103 DPNTKHSRGFGFVTFASIFSAESAMNDRPHK-LGGKTV 139
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
DP T S+G+GFV++ AESA+ + LG +++
Sbjct: 104 DPNTKHSRGFGFVTFASIFSAESAMNDRPHK-LGGKTV 140
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 187 DEVYNQSSGSNCTVYCGGLTTGLTEELMQKTLQPFGTIQEIRVFKDKGYALMR 345
DEV + C ++ G L + E +++ P G I E KG+A +R
Sbjct: 105 DEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-YLSGKGFAFLR 156
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMN 89
D T KS+GYGFV+ ++ AE A N
Sbjct: 69 DRNTQKSRGYGFVTMKDRASAERACKDPN 97
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
KSKG + Y EA A++ +NGQ L R++
Sbjct: 226 KSKGVCVIQYTHPIEAVQAVSMLNGQRLFDRNL 258
>Z81142-8|CAO82053.1| 370|Caenorhabditis elegans Hypothetical
protein ZK1037.13 protein.
Length = 370
Score = 27.1 bits (57), Expect = 5.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 175 PLTFDEVYNQSSGSNCTVYCGGLTTG 252
PL F ++ N + S+C CGG G
Sbjct: 26 PLVFPQMSNSETTSDCCSVCGGAPNG 51
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 15 LKSKGYGFVSYLKKSEAESAITSMNGQWL-GSRSI 116
+ G+GFV + + +A+ A+ +NG+ L G R I
Sbjct: 32 IMKNGFGFVDFQDQRDADDAVHDLNGKELCGERVI 66
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 27.1 bits (57), Expect = 5.4
Identities = 8/36 (22%), Positives = 21/36 (58%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSR 110
DP T +++G+GF++++ S + + + + G +
Sbjct: 79 DPATKRARGFGFITFVDPSSVDKVLNNREHELDGKK 114
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 27.1 bits (57), Expect = 5.4
Identities = 8/36 (22%), Positives = 21/36 (58%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSR 110
DP T +++G+GF++++ S + + + + G +
Sbjct: 79 DPATKRARGFGFITFVDPSSVDKVLNNREHELDGKK 114
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = -2
Query: 345 SHQSISFVLEDSDLLNSSEWLQGLLHQFFGQSGGQTSTVHRAIATGAL 202
SH ++F+ ++ +N + ++ +L + ++G Q ST++ TGAL
Sbjct: 397 SHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIY--AGTGAL 442
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = -2
Query: 345 SHQSISFVLEDSDLLNSSEWLQGLLHQFFGQSGGQTSTVHRAIATGAL 202
SH ++F+ ++ +N + ++ +L + ++G Q ST++ TGAL
Sbjct: 397 SHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIY--AGTGAL 442
>Z73427-7|CAA97799.1| 371|Caenorhabditis elegans Hypothetical
protein F58B3.7 protein.
Length = 371
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 36 FVSYLKKSEAESAITSMNGQWLGSRSI 116
FV + ++A A MNG++ G RS+
Sbjct: 330 FVEFTNNAQAIKAFVMMNGRFFGGRSV 356
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = -2
Query: 345 SHQSISFVLEDSDLLNSSEWLQGLLHQFFGQSGGQTSTVHRAIATGAL 202
SH ++F+ ++ +N + ++ +L + ++G Q ST++ TGAL
Sbjct: 397 SHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIY--AGTGAL 442
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = -2
Query: 345 SHQSISFVLEDSDLLNSSEWLQGLLHQFFGQSGGQTSTVHRAIATGAL 202
SH ++F+ ++ +N + ++ +L + ++G Q ST++ TGAL
Sbjct: 397 SHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIY--AGTGAL 442
>AL132951-11|CAN86614.1| 502|Caenorhabditis elegans Hypothetical
protein JC8.10c protein.
Length = 502
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = -2
Query: 345 SHQSISFVLEDSDLLNSSEWLQGLLHQFFGQSGGQTSTVHRAIATGAL 202
SH ++F+ ++ +N + ++ +L + ++G Q ST++ TGAL
Sbjct: 397 SHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIY--AGTGAL 442
>AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin
UNC-26C protein.
Length = 502
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = -2
Query: 345 SHQSISFVLEDSDLLNSSEWLQGLLHQFFGQSGGQTSTVHRAIATGAL 202
SH ++F+ ++ +N + ++ +L + ++G Q ST++ TGAL
Sbjct: 397 SHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIY--AGTGAL 442
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = -2
Query: 345 SHQSISFVLEDSDLLNSSEWLQGLLHQFFGQSGGQTSTVHRAIATGAL 202
SH ++F+ ++ +N + ++ +L + ++G Q ST++ TGAL
Sbjct: 397 SHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIY--AGTGAL 442
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = -2
Query: 345 SHQSISFVLEDSDLLNSSEWLQGLLHQFFGQSGGQTSTVHRAIATGAL 202
SH ++F+ ++ +N + ++ +L + ++G Q ST++ TGAL
Sbjct: 397 SHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIY--AGTGAL 442
>Z81114-3|CAB03289.1| 664|Caenorhabditis elegans Hypothetical
protein T04D3.3 protein.
Length = 664
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -1
Query: 232 STPCNCYRSSDCRPRRKSEAWSSVHSSEPVVLLVAQLV 119
++ C C+RS+ C + + + S H LL QL+
Sbjct: 7 TSSCGCFRSAFCLLKPSTSSASEEHGDSDKKLLSVQLI 44
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 24 KGYGFVSYLKKSEAESAITSMNGQWL-GSRSIRTN 125
KGY F+ ++ EA + +NG + G + IR N
Sbjct: 108 KGYCFIEFITFDEARQTLYDLNGNRIPGFKDIRFN 142
>Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical
protein W02B12.6a protein.
Length = 793
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 267 QFFGQSGGQTSTVHRAIATGALIVDLVESQRL 172
QF+G+ GGQTS + G + ++ ++++
Sbjct: 525 QFYGEQGGQTSDTGHLLIDGREVFEVENAKKI 556
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMN 89
D T KGYGFV + A +A+ +N
Sbjct: 141 DKATNNCKGYGFVDFESPQAAAAAVDGLN 169
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMN 89
D T KGYGFV + A +A+ +N
Sbjct: 115 DKATNNCKGYGFVDFESPQAAAAAVDGLN 143
>U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical
protein C26E6.7a protein.
Length = 633
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 384 SIDCVGATFLCPESHQSISFVLEDSD 307
S V +T + ESHQ IS +EDS+
Sbjct: 470 SSSAVSSTTVLEESHQKISGAMEDSE 495
>U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical
protein C26E6.7b protein.
Length = 635
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 384 SIDCVGATFLCPESHQSISFVLEDSD 307
S V +T + ESHQ IS +EDS+
Sbjct: 472 SSSAVSSTTVLEESHQKISGAMEDSE 497
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 24 KGYGFVSYLKKSEAESAITSMNG 92
+GYG+V Y +AE +I M+G
Sbjct: 175 RGYGYVEYDNLEDAEKSIKHMDG 197
>AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA
synthetase protein.
Length = 793
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 267 QFFGQSGGQTSTVHRAIATGALIVDLVESQRL 172
QF+G+ GGQTS + G + ++ ++++
Sbjct: 525 QFYGEQGGQTSDTGHLLIDGREVFEVENAKKI 556
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +3
Query: 189 RGLQSELR*QLHGVLWRSDHRTDRRTDAEDLAAIRNYSGDQSLQGQRI 332
RG+ S ++HG+++ D+ TD T E + A+ + + + +Q + I
Sbjct: 83 RGIWSNYYAEVHGIIYVIDYSTD-ETFTESIEALHSLTSNPHVQKKPI 129
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +3
Query: 189 RGLQSELR*QLHGVLWRSDHRTDRRTDAEDLAAIRNYSGDQSLQGQRI 332
RG+ S ++HG+++ D+ TD T E + A+ + + + +Q + I
Sbjct: 83 RGIWSNYYAEVHGIIYVIDYSTD-ETFTESIEALHSLTSNPHVQKKPI 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,796,137
Number of Sequences: 27780
Number of extensions: 185833
Number of successful extensions: 891
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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