Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5558
         (415 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          26   0.19 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      26   0.19 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   0.59 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   2.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   4.2  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   4.2  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 25.8 bits (54), Expect = 0.19
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 79  VIADSASDFFKYETKPYPFDLRV 11
           V+++  S+ FKY ++PY F  R+
Sbjct: 580 VVSEDGSETFKYSSQPYGFPERL 602


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.8 bits (54), Expect = 0.19
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 79  VIADSASDFFKYETKPYPFDLRV 11
           V+++  S+ FKY ++PY F  R+
Sbjct: 580 VVSEDGSETFKYSSQPYGFPERL 602


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.2 bits (50), Expect = 0.59
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 304 EIRVFKDKGYALMRFWTKESGTHAIDAVHNTDM 402
           EIRVF D    L +     +G +   AV N D+
Sbjct: 358 EIRVFNDGSLYLTKVQLIHAGNYTCHAVRNQDV 390


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 349 WTKESGTHAIDAVHNTDMN 405
           WT+E    A++A+ N DM+
Sbjct: 411 WTQEDMDAALEALRNHDMS 429


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 216 QLHGVLWRSDHRTDRRTDAEDLAAIR 293
           Q+HG   R+ HR  R+     +A +R
Sbjct: 203 QIHGYRCRTMHRLTRQVVVSSVANVR 228


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 216 QLHGVLWRSDHRTDRRTDAEDLAAIR 293
           Q+HG   R+ HR  R+     +A +R
Sbjct: 203 QIHGYRCRTMHRLTRQVVVSSVANVR 228


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 406 RSYQCCEQHRLRG 368
           ++YQC  +HRL G
Sbjct: 177 KTYQCRTKHRLTG 189


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 52  FKYETKPYPF 23
           FKY +KPY F
Sbjct: 215 FKYSSKPYXF 224


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,734
Number of Sequences: 438
Number of extensions: 2281
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)