Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5554
         (539 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128479-1|AAM75072.1| 1058|Drosophila melanogaster RE53774p pro...    31   1.0  
AE014296-225|AAF47475.2| 1058|Drosophila melanogaster CG9153-PB,...    29   4.1  
AE014296-224|AAF47474.2| 1058|Drosophila melanogaster CG9153-PA,...    29   4.1  
BT022921-1|AAY55337.1|  164|Drosophila melanogaster IP04412p pro...    28   7.1  
AF132169-1|AAD34757.1|  879|Drosophila melanogaster unknown prot...    28   7.1  
AE014298-2468|AAF48659.1|  879|Drosophila melanogaster CG9634-PA...    28   7.1  
AE014134-2092|AAF53118.1|  169|Drosophila melanogaster CG14932-P...    28   7.1  

>AY128479-1|AAM75072.1| 1058|Drosophila melanogaster RE53774p protein.
          Length = 1058

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = -1

Query: 401  TGSPSLPLQLISCANLTITPLIRRKNKPEHRTAFD-----RSKTNDKMPRKAERFIQERF 237
            TGS  +P+Q +    LTI P    +  P   T FD     R KT +++  K  + IQ+  
Sbjct: 994  TGSDRIPIQGMKALKLTIQPTPDERFLPVAHTCFDLLDLPRYKTKERLKYKLLQAIQQTQ 1053

Query: 236  FFSV 225
             FS+
Sbjct: 1054 GFSL 1057


>AE014296-225|AAF47475.2| 1058|Drosophila melanogaster CG9153-PB,
            isoform B protein.
          Length = 1058

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = -1

Query: 401  TGSPSLPLQLISCANLTITPLIRRKNKPEHRTAFD-----RSKTNDKMPRKAERFIQERF 237
            TGS  +P+Q +    LTI P    +  P   T F+     R KT +++  K  + IQ+  
Sbjct: 994  TGSDRIPIQGMKALKLTIQPTPDERFLPVAHTCFNLLDLPRYKTKERLKYKLLQAIQQTQ 1053

Query: 236  FFSV 225
             FS+
Sbjct: 1054 GFSL 1057


>AE014296-224|AAF47474.2| 1058|Drosophila melanogaster CG9153-PA,
            isoform A protein.
          Length = 1058

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = -1

Query: 401  TGSPSLPLQLISCANLTITPLIRRKNKPEHRTAFD-----RSKTNDKMPRKAERFIQERF 237
            TGS  +P+Q +    LTI P    +  P   T F+     R KT +++  K  + IQ+  
Sbjct: 994  TGSDRIPIQGMKALKLTIQPTPDERFLPVAHTCFNLLDLPRYKTKERLKYKLLQAIQQTQ 1053

Query: 236  FFSV 225
             FS+
Sbjct: 1054 GFSL 1057


>BT022921-1|AAY55337.1|  164|Drosophila melanogaster IP04412p
           protein.
          Length = 164

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
 Frame = -1

Query: 407 YDTGSPSLPLQLISCANLTITPLIRRKNKPEHRTAFDRSKTNDKMPRKAERFIQERFFFS 228
           Y+ G+P  P   +    +T  P I +KN         + +T    P + +   QER  FS
Sbjct: 9   YEAGTPRRPHSALEITEITEFPKIPKKNPTSPELVIQKPET----PDQNDSGSQERLTFS 64

Query: 227 --VNLLSECRFYRVS 189
              N LSE    RVS
Sbjct: 65  RANNALSESIGARVS 79


>AF132169-1|AAD34757.1|  879|Drosophila melanogaster unknown
           protein.
          Length = 879

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +3

Query: 375 LQGKRRATCIITLRVRSSIVHVSTACSCILVIHI 476
           L G+R    +++L  +  I++V+TAC C L++ I
Sbjct: 110 LPGRRSFDALMSLSRKRRILYVTTACLCALLLLI 143


>AE014298-2468|AAF48659.1|  879|Drosophila melanogaster CG9634-PA
           protein.
          Length = 879

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +3

Query: 375 LQGKRRATCIITLRVRSSIVHVSTACSCILVIHI 476
           L G+R    +++L  +  I++V+TAC C L++ I
Sbjct: 110 LPGRRSFDALMSLSRKRRILYVTTACLCALLLLI 143


>AE014134-2092|AAF53118.1|  169|Drosophila melanogaster CG14932-PA
           protein.
          Length = 169

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
 Frame = -1

Query: 407 YDTGSPSLPLQLISCANLTITPLIRRKNKPEHRTAFDRSKTNDKMPRKAERFIQERFFFS 228
           Y+ G+P  P   +    +T  P I +KN         + +T    P + +   QER  FS
Sbjct: 14  YEAGTPRRPHSALEITEITEFPKIPKKNPTSPELVIQKPET----PDQNDSGSQERLTFS 69

Query: 227 --VNLLSECRFYRVS 189
              N LSE    RVS
Sbjct: 70  RANNALSESIGARVS 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,463,254
Number of Sequences: 53049
Number of extensions: 558826
Number of successful extensions: 1787
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1787
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)