Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5552
(612 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1527|AAF47979.1| 592|Drosophila melanogaster CG2145-PA... 31 0.93
AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alph... 31 1.2
AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-P... 31 1.2
AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-P... 31 1.2
X97197-1|CAA65831.1| 366|Drosophila melanogaster spliceosomal p... 29 3.7
BT023489-1|AAY84889.1| 347|Drosophila melanogaster RE50839p pro... 29 3.7
AE014298-857|AAF46136.1| 347|Drosophila melanogaster CG3780-PA ... 29 3.7
D50542-1|BAA09102.1| 486|Drosophila melanogaster GATA transcrip... 29 6.5
AY071369-1|AAL48991.1| 486|Drosophila melanogaster RE40104p pro... 29 6.5
AE014297-700|AAF54195.1| 486|Drosophila melanogaster CG9656-PA ... 29 6.5
>AE014298-1527|AAF47979.1| 592|Drosophila melanogaster CG2145-PA
protein.
Length = 592
Score = 31.5 bits (68), Expect = 0.93
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 274 STRATPRLPSPSQHPSLRPLRPQYLPFHPTLPR 372
STRATP PS PS +P P + + P P+
Sbjct: 129 STRATPSHPSQPSQPSQQPPLPGFASYRPQKPQ 161
>AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alpha1,2
protein.
Length = 3367
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = -2
Query: 605 GKRSCMSVTGYRGSVCLGHQRSGMGIGCVRGGVSNRGCMC---GISCEWCSMRSVSCNRC 435
G+ SC+ GY G +C Q G + + C C GI E C + + C C
Sbjct: 1736 GEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGIQTEGCDVETGRC-YC 1794
Query: 434 GSGVSRYRSDSFGEER 387
GV+ + D ER
Sbjct: 1795 REGVTGLKCDKCQAER 1810
>AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-PA,
isoform A protein.
Length = 2731
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = -2
Query: 605 GKRSCMSVTGYRGSVCLGHQRSGMGIGCVRGGVSNRGCMC---GISCEWCSMRSVSCNRC 435
G+ SC+ GY G +C Q G + + C C GI E C + + C C
Sbjct: 1736 GEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGIQTEGCDVETGRC-YC 1794
Query: 434 GSGVSRYRSDSFGEER 387
GV+ + D ER
Sbjct: 1795 REGVTGLKCDKCQAER 1810
>AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-PB,
isoform B protein.
Length = 3375
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = -2
Query: 605 GKRSCMSVTGYRGSVCLGHQRSGMGIGCVRGGVSNRGCMC---GISCEWCSMRSVSCNRC 435
G+ SC+ GY G +C Q G + + C C GI E C + + C C
Sbjct: 1736 GEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGIQTEGCDVETGRC-YC 1794
Query: 434 GSGVSRYRSDSFGEER 387
GV+ + D ER
Sbjct: 1795 REGVTGLKCDKCQAER 1810
>X97197-1|CAA65831.1| 366|Drosophila melanogaster spliceosomal
protein protein.
Length = 366
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 256 PTLRLPSTRATPRLPSPSQHPSLRPLRPQYLPFHPT 363
P + P+ A P +P+P P RP +PF PT
Sbjct: 318 PRMMQPNAWAPPGMPAPPPRPPPTNWRPPPVPFPPT 353
>BT023489-1|AAY84889.1| 347|Drosophila melanogaster RE50839p
protein.
Length = 347
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 256 PTLRLPSTRATPRLPSPSQHPSLRPLRPQYLPFHPT 363
P + P+ A P +P+P P RP +PF PT
Sbjct: 299 PRMMQPNAWAPPGMPAPPPRPPPTNWRPPPVPFPPT 334
>AE014298-857|AAF46136.1| 347|Drosophila melanogaster CG3780-PA
protein.
Length = 347
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 256 PTLRLPSTRATPRLPSPSQHPSLRPLRPQYLPFHPT 363
P + P+ A P +P+P P RP +PF PT
Sbjct: 299 PRMMQPNAWAPPGMPAPPPRPPPTNWRPPPVPFPPT 334
>D50542-1|BAA09102.1| 486|Drosophila melanogaster GATA
transcription factor protein.
Length = 486
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 253 QPTLRLPSTRATPRLPSPSQHPSLRP-LRPQYLPFHP 360
Q T R+PST A+P++ P H L P L ++ F P
Sbjct: 106 QHTSRMPSTHASPQVCRPHFHTPLSPWLTSEHKSFAP 142
>AY071369-1|AAL48991.1| 486|Drosophila melanogaster RE40104p
protein.
Length = 486
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 253 QPTLRLPSTRATPRLPSPSQHPSLRP-LRPQYLPFHP 360
Q T R+PST A+P++ P H L P L ++ F P
Sbjct: 106 QHTSRMPSTHASPQVCRPHFHTPLSPWLTSEHKSFAP 142
>AE014297-700|AAF54195.1| 486|Drosophila melanogaster CG9656-PA
protein.
Length = 486
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 253 QPTLRLPSTRATPRLPSPSQHPSLRP-LRPQYLPFHP 360
Q T R+PST A+P++ P H L P L ++ F P
Sbjct: 106 QHTSRMPSTHASPQVCRPHFHTPLSPWLTSEHKSFAP 142
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,232,477
Number of Sequences: 53049
Number of extensions: 290919
Number of successful extensions: 1421
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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