Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5537
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 33 0.19
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 32 0.32
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 32 0.43
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 1.3
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 29 2.3
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 4.0
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 4.0
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 4.0
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 5.3
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 5.3
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 28 5.3
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 5.3
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 5.3
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 5.3
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 28 5.3
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 28 5.3
Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical pr... 28 7.0
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein. 28 7.0
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 28 7.0
U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical pr... 27 9.2
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 9.2
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 33.1 bits (72), Expect = 0.19
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Frame = +3
Query: 405 KSSEIPDAEAKSADIKV-----EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADS 569
KS E P E K ++ V +EPAA E+ K + V E KEE P++ +E D
Sbjct: 126 KSEEAPAPEEKKSEEVVAAEEKKEPAAVVEEKKEVPETPVVEDKKEEAPAS--SEEKKDE 183
Query: 570 AAIIPNMVKKIDLAPNVESDAAAVPE 647
+ K AP + ++ A E
Sbjct: 184 PVVNTEEKKDAAEAPAADEESEAAEE 209
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 32.3 bits (70), Expect = 0.32
Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 5/136 (3%)
Frame = +3
Query: 282 SNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEE 461
+++ PA EA D A ++ A A SS +P+ A E
Sbjct: 504 ASEPAPAPIEAPATDAATLETAPAPAAEPAPAAEAAAGYDAPSS-VPEETPAPAPAADET 562
Query: 462 PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID----LAPNVESD 629
PA P +T A AE + P+A + +A +A P D AP E
Sbjct: 563 PAPAPAAEETPAPAPAAEETPAPAPAAEETPATAPAAEETPAPAPAADETPAPAPAAEET 622
Query: 630 AAAVPEI-KTPEAADA 674
A P + +TP A A
Sbjct: 623 PAPAPAVEETPAPAPA 638
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +3
Query: 402 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAA 575
A+++E A A +A+ E PA+ P +T A AE + P+A T A + +AA
Sbjct: 684 AQAAEETPAPAPAAE---ETPASAPAAEETPAPAPAAEEAPAPAPAAPETPAPAAEGAAA 740
Query: 576 IIPNMVKKIDLAPNVESDAAAVPEIKTPEAADA 674
P + D A + ++ A+ + +A+ A
Sbjct: 741 PAPIVSSGYDAAQSTDTVVASSAPATSSDASGA 773
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 31.9 bits (69), Expect = 0.43
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 435 KSADIKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 611
KSA K+ P+ + ED++ T+ A+ E S + KP T E SAD + ++ + LA
Sbjct: 66 KSASKKLRVPSKESEDTQPTKSDASQTEKSTK-KPPVTLVESSADVTTAVESISSQQQLA 124
Query: 612 P 614
P
Sbjct: 125 P 125
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 453 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 599
VEEP P KT + A + PSA + GS+ + N +KK
Sbjct: 235 VEEPIPPPNTRKTLLGEPPAGAASSSSPSAQSSTGSSTGTSSYQNNIKK 283
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 402 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 563
A+ E +A A+ A + EEP A E++ E + +EEKP A E A
Sbjct: 21 AEEVEEEEAAAEDAAAEEEEPEAAEEEAPVEEKPKPRPPVQEEKPPAEMTEAEA 74
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = +3
Query: 402 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 581
AK P E+ + PA +P D + A A K + + G ADS
Sbjct: 549 AKKDPAPAKESLKPKADTKAPA-KPRDPSPKKVAPTAPEKKTPVLAKKEPAGPADSKTKE 607
Query: 582 PNMVKKIDLAPNVESDAAAVPEIKTPEAA 668
P K D +P A VP+ + AA
Sbjct: 608 PEKSKPRDPSPKKAVPAKPVPKTEVAPAA 636
>Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 471 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 614
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 471 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 614
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 429 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 608
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 609 APNVESDAAAVPEIKTP 659
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 429 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 608
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 609 APNVESDAAAVPEIKTP 659
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 429 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 608
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 609 APNVESDAAAVPEIKTP 659
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 429 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 608
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 609 APNVESDAAAVPEIKTP 659
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = +3
Query: 405 KSSEIPDAEAKSADIKV--------EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGS 560
K SEIPD + +KV E+P + PE+S+ E ++K++K + S
Sbjct: 2869 KGSEIPDEDENGESVKVMKRKEYQIEKPQSMPEESEDE---EFKLLTKKKKMGVIANDPS 2925
Query: 561 ADSAAIIPNMVKK 599
D + II KK
Sbjct: 2926 NDGSEIIKMSKKK 2938
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/89 (23%), Positives = 42/89 (47%)
Frame = +3
Query: 405 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 584
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 585 NMVKKIDLAPNVESDAAAVPEIKTPEAAD 671
+ KK + +P+ + P T + D
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGD 1456
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 135 VSLAMPVAEEKDVVPAQPIL 194
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 135 VSLAMPVAEEKDVVPAQPIL 194
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/89 (23%), Positives = 42/89 (47%)
Frame = +3
Query: 405 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 584
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 585 NMVKKIDLAPNVESDAAAVPEIKTPEAAD 671
+ KK + +P+ + P T + D
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGD 1456
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/89 (23%), Positives = 42/89 (47%)
Frame = +3
Query: 405 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 584
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 585 NMVKKIDLAPNVESDAAAVPEIKTPEAAD 671
+ KK + +P+ + P T + D
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGD 1456
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/89 (23%), Positives = 42/89 (47%)
Frame = +3
Query: 405 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 584
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 585 NMVKKIDLAPNVESDAAAVPEIKTPEAAD 671
+ KK + +P+ + P T + D
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGD 1456
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 135 VSLAMPVAEEKDVVPAQPIL 194
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 135 VSLAMPVAEEKDVVPAQPIL 194
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical
protein F53A2.4 protein.
Length = 320
Score = 27.9 bits (59), Expect = 7.0
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 432 AKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 608
AK ++ EE AA + E +K V+ + E + S DS + PN DL
Sbjct: 99 AKVVEVTDEEAAAFEKEQAKNSVENLEKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADL 158
Query: 609 APNVESDAAAVPEIKTPEAA 668
A + E+K P AA
Sbjct: 159 AKYQWTQTLQELEVKIPIAA 178
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 528 EKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAA 668
EKP++ +AE D + K ++L V A PE PEA+
Sbjct: 280 EKPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEAS 326
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 429 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEK---PSATDAEGSADSAAIIPNMVKK 599
EA ++ VEEP TE A ++ +E K + T A+ A+ + +
Sbjct: 440 EAAASSESVEEPITAVHVEATESAAPADKVHEETKIDSAAETHADAPVVDASPAEDQASE 499
Query: 600 IDLAPNVESDAAA 638
+ AP+VES +A
Sbjct: 500 VTEAPHVESAKSA 512
>Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical
protein T14B1.1 protein.
Length = 375
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 417 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVA-EISKEEKPSATDAEGSADSAAIIPNMV 593
+PD E D +VEEP A+ K V A A E + E +A+ S++ + P+
Sbjct: 1 MPDPEDPGRDEEVEEPLAK----KIRVVAQEAGEDEESEMEKEPNADLSSEEELVAPDAE 56
Query: 594 KKIDLAPNVESDAAA 638
D P ++++A A
Sbjct: 57 ---DFVPEIDNEATA 68
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 414 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 554
E + E + + K+EEPAA+ E+ + E + E EE+ + E
Sbjct: 347 EPEEEEEEEEEEKIEEPAAKEEEEEEEEEEEEEEEELEEEEEEEEEE 393
>AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein.
Length = 320
Score = 27.9 bits (59), Expect = 7.0
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 432 AKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 608
AK ++ EE AA + E +K V+ + E + S DS + PN DL
Sbjct: 99 AKVVEVTDEEAAAFEKEQAKNSVENLEKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADL 158
Query: 609 APNVESDAAAVPEIKTPEAA 668
A + E+K P AA
Sbjct: 159 AKYQWTQTLQELEVKIPIAA 178
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 421 PMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQ 522
P L N+LI WK + K ++ KY + LK Q
Sbjct: 199 PKLSLNVLISMWKKEFSDWKDEEFKYFIDFLKSQ 232
>U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical
protein C32E12.1 protein.
Length = 552
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +3
Query: 444 DIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVE 623
DIK + A + ++ +T+ + + +E K + D+ P K N++
Sbjct: 235 DIKAFQ-AEKSKEIETKKNEEMEKKQEEPKVKPVPPGTTPDTTTTTPEKKSKSITDSNIK 293
Query: 624 SDAAAVPEIKTPEA 665
+ +PE +TPEA
Sbjct: 294 PELDEIPEARTPEA 307
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 9.2
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = +3
Query: 411 SEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM 590
S P+A + D AAQ ED +E Q + E E AE SAA +
Sbjct: 2855 SVAPNASTRGDDTLTTPAAAQVEDQASEDQ-HIEEEPMEVGEDDGAAEAPQSSAATAASS 2913
Query: 591 VKKIDLAPNVESDAAA--VPEIK 653
V + +VE A VPEI+
Sbjct: 2914 VAGTEEIEDVERQAVEDHVPEIQ 2936
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,665,545
Number of Sequences: 27780
Number of extensions: 190563
Number of successful extensions: 795
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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