Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5535
         (585 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL441992-5|CAI15405.1|  205|Homo sapiens zinc finger, DHHC-type ...    31   2.3  
BC040062-1|AAH40062.1|  313|Homo sapiens potassium channel tetra...    30   6.9  
AY205299-1|AAO47716.1|  313|Homo sapiens ULR061 protein.               30   6.9  
AK027543-1|BAB55188.1|  310|Homo sapiens protein ( Homo sapiens ...    30   6.9  
BC110451-1|AAI10452.1| 1042|Homo sapiens corin, serine peptidase...    29   9.1  
AK222548-1|BAD96268.1|  313|Homo sapiens potassium channel tetra...    29   9.1  
AF133845-1|AAD31850.1| 1042|Homo sapiens corin protein.                29   9.1  

>AL441992-5|CAI15405.1|  205|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 205

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = -2

Query: 518 CVSVRNNTEYILMLSLELLVISRFLLLAGKRNLCARLLLLPVTLSFLGFVVEI 360
           CV  RN+  +++ L+L+L+V+   L LA  R L     + P  L  LG VV +
Sbjct: 133 CVGERNHPLFVVYLALQLVVLLWGLYLACTRPLSPAPQVRPPVLPALGSVVAV 185


>BC040062-1|AAH40062.1|  313|Homo sapiens potassium channel
           tetramerisation domain containing 10 protein.
          Length = 313

 Score = 29.9 bits (64), Expect = 6.9
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 355 IEISTTKPKNDKVTGSSNKRAHKFRFPASNRKRLITRSSSDNI 483
           + + T+  +  K+  +SNK A K  +  SN K   T +S DN+
Sbjct: 140 VPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNSDDNM 182


>AY205299-1|AAO47716.1|  313|Homo sapiens ULR061 protein.
          Length = 313

 Score = 29.9 bits (64), Expect = 6.9
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 355 IEISTTKPKNDKVTGSSNKRAHKFRFPASNRKRLITRSSSDNI 483
           + + T+  +  K+  +SNK A K  +  SN K   T +S DN+
Sbjct: 140 VPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNSDDNM 182


>AK027543-1|BAB55188.1|  310|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14637 fis, clone NT2RP2001327, moderately
           similar to TUMOR NECROSIS FACTOR, ALPHA-INDUCED PROTEIN
           1. ).
          Length = 310

 Score = 29.9 bits (64), Expect = 6.9
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 355 IEISTTKPKNDKVTGSSNKRAHKFRFPASNRKRLITRSSSDNI 483
           + + T+  +  K+  +SNK A K  +  SN K   T +S DN+
Sbjct: 137 VPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNSDDNM 179


>BC110451-1|AAI10452.1| 1042|Homo sapiens corin, serine peptidase
           protein.
          Length = 1042

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -2

Query: 452 RFLLLAGKRNLCARLLLLPVTLSFLGFVVEISIKS 348
           RFLLL     +CA +LLL + LS++G + ++  KS
Sbjct: 45  RFLLLVLIPCICALVLLLVILLSYVGTLQKVYFKS 79


>AK222548-1|BAD96268.1|  313|Homo sapiens potassium channel
           tetramerisation domain containing 10 variant protein.
          Length = 313

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 355 IEISTTKPKNDKVTGSSNKRAHKFRFPASNRKRLITRSSSDNI 483
           + + T+  +  K+  +SNK A K  +  SN K   T +S DN+
Sbjct: 140 VPVITSSKEEQKLIATSNKPAVKLLYNRSNTKYSYTSNSDDNM 182


>AF133845-1|AAD31850.1| 1042|Homo sapiens corin protein.
          Length = 1042

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -2

Query: 452 RFLLLAGKRNLCARLLLLPVTLSFLGFVVEISIKS 348
           RFLLL     +CA +LLL + LS++G + ++  KS
Sbjct: 45  RFLLLVLIPCICALVLLLVILLSYVGTLQKVYFKS 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,657,897
Number of Sequences: 237096
Number of extensions: 1725640
Number of successful extensions: 3051
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3051
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)