Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5534
(349 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 1.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 1.8
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 1.8
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 2.4
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 2.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 2.4
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 5.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 7.3
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 20 7.3
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 20 7.3
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 20 7.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 20 7.3
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 1.8
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +1
Query: 151 IKYTACTWWNWCCT 192
I Y C WW C T
Sbjct: 483 IGYYPCCWWKICWT 496
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 1.8
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +1
Query: 151 IKYTACTWWNWCCT 192
I Y C WW C T
Sbjct: 536 IGYYPCCWWKICWT 549
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 22.2 bits (45), Expect = 1.8
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +1
Query: 40 LQYHSSTTIL--IKHGSTTRFDVCQNT 114
++ H TI+ + HG TT D +NT
Sbjct: 142 IKRHPIVTIMGHVDHGKTTLLDALRNT 168
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.8 bits (44), Expect = 2.4
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 192 GTTPVPPSTGCVFNSDTTSAFWACTPGVLTNI 97
GT+ + TGC S++ A T V T++
Sbjct: 789 GTSSITKYTGCELTSESMPLQSALTAAVQTSV 820
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.8 bits (44), Expect = 2.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -2
Query: 225 PGGACGTSLKIGTTPVPPS 169
P GTS TP PPS
Sbjct: 38 PEHLAGTSTTAAATPTPPS 56
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 2.4
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 192 GTTPVPPSTGCVFNSDTTSAFWACTPGVLTNI 97
GT+ + TGC S++ A T V T++
Sbjct: 879 GTSSITKYTGCELTSESMPLQSALTAAVQTSV 910
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 20.6 bits (41), Expect = 5.5
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -1
Query: 133 VLGLHPRCFDKHQ 95
+L L+P+ +DKH+
Sbjct: 9 ILPLNPKLYDKHR 21
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.2 bits (40), Expect = 7.3
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 240 CGIGIPGGACGTSLKIGTTPVPP 172
CG+ PG A G S + T+ P
Sbjct: 89 CGMRWPGDATGLSNRSSTSSNDP 111
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.2 bits (40), Expect = 7.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 243 YCGIGIPGGACGTSLKIGTTPVPPST 166
YC + I G T K P PPS+
Sbjct: 325 YCLVNIVLGDSDTPPKPAPPPPPPSS 350
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 20.2 bits (40), Expect = 7.3
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +3
Query: 57 HHHPYQTWLHHQ 92
HHH + HHQ
Sbjct: 432 HHHSHAATPHHQ 443
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.2 bits (40), Expect = 7.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 237 GIGIPGGACGTSLKIGTTPVPPSTG 163
GI I CG LK TPV ++G
Sbjct: 667 GILITLFVCGVFLKHNDTPVVRASG 691
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.2 bits (40), Expect = 7.3
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +3
Query: 39 PPISQFHHH 65
PP Q HHH
Sbjct: 809 PPHQQLHHH 817
Score = 19.8 bits (39), Expect = 9.6
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = +3
Query: 24 HSPISPPISQFHHHPYQ 74
H + Q HH PYQ
Sbjct: 148 HHHLQSTAVQDHHRPYQ 164
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,843
Number of Sequences: 438
Number of extensions: 2599
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 7936320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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