Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5533
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 35 0.036
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 34 0.082
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 33 0.19
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 31 0.58
AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical ... 31 0.58
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 31 0.77
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 31 0.77
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 30 1.0
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 30 1.0
AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protei... 29 1.8
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 29 3.1
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 28 5.4
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 28 5.4
Z81464-7|CAB03857.2| 338|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical p... 27 7.2
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81513-11|CAB04184.2| 254|Caenorhabditis elegans Hypothetical p... 27 9.5
Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical pr... 27 9.5
U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative transc... 27 9.5
U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain fami... 27 9.5
AL132943-4|CAB81975.1| 690|Caenorhabditis elegans Hypothetical ... 27 9.5
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 27 9.5
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 35.1 bits (77), Expect = 0.036
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = +2
Query: 101 AVSSQSIVRHDEPSHQATAHYTPVLSHAAPVL---THAAPLIQHAGPIVHAAPVEHSSYI 271
A + Q V P Q PV A P A P++Q A P+ A+P + +
Sbjct: 179 APTQQPPVVQQTPPPQQPVVQAPVAQQAPPSQPQQAQAQPVVQQAPPVQQASPKPVAQPV 238
Query: 272 HASPVVQHFSP--VQHAPVVHHAAIP 343
PVVQ VQ APVV A P
Sbjct: 239 QQQPVVQAPPKPIVQQAPVVQQAPPP 264
Score = 33.9 bits (74), Expect = 0.082
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 110 SQSIVRHDEPSHQATAHYTPVLSHAAPVL-THAAPLIQHAGPIVHAAPVEHSSYIHASPV 286
+Q +V+ P QA+ PV+ P++Q A P+V AP A PV
Sbjct: 216 AQPVVQQAPPVQQASPKPVAQPVQQQPVVQAPPKPIVQQA-PVVQQAPPPKQQQAQAQPV 274
Query: 287 VQHFSPVQHAPVVHHAAIPI 346
Q P APVV A+ P+
Sbjct: 275 QQ---PPNPAPVVQQASAPV 291
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 33.9 bits (74), Expect = 0.082
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 251 VEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 388
VE SSYIH+S +QH H P + ++H H P+
Sbjct: 87 VESSSYIHSSQQIQHPPQQHHPPPPSPPPVAETIQHQPHPSQQQPS 132
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 32.7 bits (71), Expect = 0.19
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 9/107 (8%)
Frame = +2
Query: 86 EGHGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH--AAPVE- 256
E G S S + H A +PV + + HA+ +H + H AA E
Sbjct: 692 EHRGEVPQSPSSNQFHSSEHIEEARQSPVTNQESVHSPHASEHFEHREVVPHSPAASQEE 751
Query: 257 --HSSYIHASPVVQHF---SPVQHAPVV-HHAAIPIAVEHSDHVEDH 379
S +H+ V +HF QH+PV A HS H +H
Sbjct: 752 FGRSPSVHSPHVSEHFEHHEEAQHSPVASQEEAARSPSVHSSHASEH 798
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 1/112 (0%)
Frame = +2
Query: 104 VSSQSIVRHDEP-SHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHAS 280
V S++ H E S A+ H L + + + P+ + P S + +S
Sbjct: 627 VQSENFEHHAEVHSFHASEHIDEALPSPVQSVHSSHDHHDRSSPVA-SEPAARSPSVQSS 685
Query: 281 PVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDH 436
+HF +H V + S+H+E+ + SV PH +H
Sbjct: 686 RTSEHF---EHRGEVPQSPSSNQFHSSEHIEEARQSPVTNQESVHSPHASEH 734
Score = 29.1 bits (62), Expect = 2.3
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 10/111 (9%)
Frame = +2
Query: 122 VRHDEPSHQATAHYTPVLS-HAAPVLTHAAPLIQHAGPIVHAAPV-EH-SSYIHASPVVQ 292
V D +H +PV S H++ H Q P VH++ EH SPV
Sbjct: 556 VHTDHKAHSEDVPQSPVQSVHSSHASEHIDEAPQSPVPSVHSSHASEHIEQEALPSPVAS 615
Query: 293 HFS-PVQHAPVV------HHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPH 424
P +P+V HHA + + S+H+++ P+ + +S D H
Sbjct: 616 ERDVPSAESPLVQSENFEHHAEVH-SFHASEHIDEALPSPVQSVHSSHDHH 665
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 31.1 bits (67), Expect = 0.58
Identities = 29/119 (24%), Positives = 38/119 (31%)
Frame = +2
Query: 92 HGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYI 271
HGH H + H+ SH +P H H P H EH ++
Sbjct: 468 HGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPA-HHGHHGEHHHAPAHHGHHGEHGTH- 525
Query: 272 HASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKCQH 448
H H +P H HH H H H+PA + + E H H H
Sbjct: 526 HGHHGEHHHAPAHHG---HHGEH--GTHHGHHGSHHSPAHH--GHHGEHHHAPAHHGHH 577
Score = 28.7 bits (61), Expect = 3.1
Identities = 33/130 (25%), Positives = 41/130 (31%), Gaps = 5/130 (3%)
Frame = +2
Query: 74 GVIDEGHG-HAVSSQSIVRHDEPS----HQATAHYTPVLSHAAPVLTHAAPLIQHAGPIV 238
GV HG H + S H E H H+ P +H +H H P
Sbjct: 400 GVHHRHHGEHHGTHHSPAHHGEHGTHHGHHGEHHHAP--AHHGHHESHGHG---HHSPAH 454
Query: 239 HAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVED 418
H H + HA H HAP H H H H+PA + + E
Sbjct: 455 HG---HHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHH--GHHGEH 509
Query: 419 PHTGDHKCQH 448
H H H
Sbjct: 510 HHAPAHHGHH 519
>AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical
protein F54E2.2 protein.
Length = 174
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 333 AWCTTGACCTGLKCWTTGEACIYEEC 256
+WCTT C G KC TG C Y C
Sbjct: 150 SWCTTDQDCKGKKCCPTG--CDYNVC 173
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 30.7 bits (66), Expect = 0.77
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = +2
Query: 101 AVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHA--GPIVHAAPVEHSSYIH 274
A +Q + + SH T P S+ AP A + QH+ G + A P S + H
Sbjct: 1212 APGAQFGAKPEASSHAPTPPPQPHPSYQAPAPPPALSVFQHSPQGAPITAPPPASSHHEH 1271
Query: 275 ASPVVQHFSPVQHAPVVHHA 334
+ F+P AP HA
Sbjct: 1272 IAAPQARFTPTPGAPSPWHA 1291
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 30.7 bits (66), Expect = 0.77
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = +2
Query: 101 AVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHA--GPIVHAAPVEHSSYIH 274
A +Q + + SH T P S+ AP A + QH+ G + A P S + H
Sbjct: 1232 APGAQFGAKPEASSHAPTPPPQPHPSYQAPAPPPALSVFQHSPQGAPITAPPPASSHHEH 1291
Query: 275 ASPVVQHFSPVQHAPVVHHA 334
+ F+P AP HA
Sbjct: 1292 IAAPQARFTPTPGAPSPWHA 1311
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/79 (30%), Positives = 29/79 (36%)
Frame = +3
Query: 225 PVLLFTPPPWNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLPRSMSSH 404
P L PP W R+ S TS N TT PS TP+ ++ P S
Sbjct: 610 PTDLPPPPVWPAPNFDRRRKSSETSFTTN-----TTTNTLTPS-TPVTPPVLRPAFSESK 663
Query: 405 IPSRIPTPAITSANTKPVM 461
P P T N KP +
Sbjct: 664 APQEPSKPVETKENNKPAL 682
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/79 (30%), Positives = 29/79 (36%)
Frame = +3
Query: 225 PVLLFTPPPWNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLPRSMSSH 404
P L PP W R+ S TS N TT PS TP+ ++ P S
Sbjct: 512 PTDLPPPPVWPAPNFDRRRKSSETSFTTN-----TTTNTLTPS-TPVTPPVLRPAFSESK 565
Query: 405 IPSRIPTPAITSANTKPVM 461
P P T N KP +
Sbjct: 566 APQEPSKPVETKENNKPAL 584
>AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protein
protein.
Length = 1198
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = -2
Query: 395 HTSREHDLRHDRSVRRQLESQRGARLEHVAQG*SVGLLAKHVYTKNVPRGRREQ*DRHVE 216
H+S+ R D + L +++ L+ +AQG V+ +P G+REQ D+ +
Sbjct: 27 HSSKSFRNRRDNDLLDWLTAEQKVSLKDIAQGTEEFKKKVAVFYNELPSGKREQRDKFYK 86
Query: 215 SKGLR 201
+ L+
Sbjct: 87 THCLQ 91
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 28.7 bits (61), Expect = 3.1
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = -2
Query: 473 SRHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQ--G 300
S+HHHH + D+ +++ R H RE + D R+ + + R + +
Sbjct: 114 SKHHHHHHKKERKDKEHKKHKKD-REHRDREKERERDERKERERQQKEKEREDAARREIE 172
Query: 299 *SVGLLAKHVYTKNVPRGRREQ*DRHVESKGLRESVLEQHDS 174
+ AK V + R R+E+ R E K +E + E+ S
Sbjct: 173 EKAEMDAKRVAEEEEER-RKEKEKRREEKKKQKELLKEKERS 213
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +1
Query: 115 KHRSP*RAFSSSNGTLYPSIESCCSSTDSRSPFD 216
K+RSP + + G P +CC D FD
Sbjct: 247 KNRSPPKCIQQATGLFQPPTTTCCQGVDLNRNFD 280
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +2
Query: 167 PVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPI 346
P + APVL APL+ P V AAP + +PV +PV P +A P+
Sbjct: 101 PFFASPAPVLAAPAPLLAPPAP-VFAAPRPVFAAPALAPVAP-MAPVLRGPAFAYAPSPV 158
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 470 RHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQR 330
RH HHG R G R G RRN S D D+ R+Q+ ++
Sbjct: 85 RHGHHG-RHGM-GRHGGHGRRNKSGSDSDSSDSSEDKKKRKQMRDKK 129
>Z81464-7|CAB03857.2| 338|Caenorhabditis elegans Hypothetical
protein C08E8.2 protein.
Length = 338
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -2
Query: 398 THTSREHDLRHDRSVRRQLESQRGARLEH--VAQG*SVGLLAKHVYTKN 258
TH+S HD RH ++ LE Q R+ H ++ G +V +LAK++Y N
Sbjct: 139 THSSIRHDCRHFFNL--VLEHQGDGRILHLKISTG-TVKVLAKNLYFPN 184
>Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 180
Score = 27.5 bits (58), Expect = 7.2
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +2
Query: 167 PVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPI 346
PV++ AAP A A P++ AAP ++ I+ PV +P AP AA+P
Sbjct: 100 PVVA-AAPAFAPAYAPAPVASPMIAAAPALAAASINGLPVAA--APA-FAPAFAPAAVPA 155
Query: 347 AV 352
AV
Sbjct: 156 AV 157
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +2
Query: 134 EPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSP 304
+P+ A+ P A P P+I P AP ++S A PV + F P
Sbjct: 455 KPAVSYDAYEEPPAEPAPPTFLAPTPVIAPPPPEPTPAPSHYASQYDAPPVHESFEP 511
>Z81513-11|CAB04184.2| 254|Caenorhabditis elegans Hypothetical
protein F26D2.14 protein.
Length = 254
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 178 SCCSSTDSRSPFDSTCRSYCSRRPRGTFFVYTCFASSPTLQPCATCSSRAPRCDSN 345
S C+S + + C+ CSR P T + SS T +TCSS P S+
Sbjct: 172 SICNSIGMQVFVNQNCQRTCSRCPSST----SARISSSTTSITSTCSSYNPDSSSS 223
>Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical
protein T06E4.8 protein.
Length = 199
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +2
Query: 167 PVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPI 346
P + APVL APL+ P V AAP + +PV +P+ P +A P+
Sbjct: 88 PFFTPPAPVLAAPAPLLAPPAP-VFAAPRPVFASPALAPVAP-MAPILRGPAFAYAPSPV 145
>Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical
protein R01E6.5 protein.
Length = 245
Score = 27.1 bits (57), Expect = 9.5
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = +2
Query: 242 AAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDP 421
A+P+ HSS+ +AS + QH H A EHS H AK E YS +D
Sbjct: 2 ASPISHSSHENASGKYGYGDESQHGKNFHQKA-----EHSGH-----EAK-EKGYS-QDG 49
Query: 422 HTGDHKCQHE 451
DH H+
Sbjct: 50 KAADHDALHK 59
>U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative
transcription factor LIM-4 protein.
Length = 355
Score = 27.1 bits (57), Expect = 9.5
Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 3/115 (2%)
Frame = +1
Query: 7 SKASQHVLQNCCSLLDFGYLPRWCYRRGPRPC---CVFPKHRSP*RAFSSSNGTLYPSIE 177
S S + + L D+ + P R P C +H+ + F S +G Y E
Sbjct: 63 SDESSVYISSALRLADYAFTPDDNIRIKPDAVIVICTQCQHQIQDKFFLSIDGRNYH--E 120
Query: 178 SCCSSTDSRSPFDSTCRSYCSRRPRGTFFVYTCFASSPTLQPCATCSSRAPRCDS 342
+C + +P + C Y + TF+ C+ + ++C P+C S
Sbjct: 121 NCLQCSTCENPLSNKC-FYKDK----TFYCKGCYFRTHVTSTASSCRELGPKCAS 170
>U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain family
protein 4 protein.
Length = 355
Score = 27.1 bits (57), Expect = 9.5
Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 3/115 (2%)
Frame = +1
Query: 7 SKASQHVLQNCCSLLDFGYLPRWCYRRGPRPC---CVFPKHRSP*RAFSSSNGTLYPSIE 177
S S + + L D+ + P R P C +H+ + F S +G Y E
Sbjct: 63 SDESSVYISSALRLADYAFTPDDNIRIKPDAVIVICTQCQHQIQDKFFLSIDGRNYH--E 120
Query: 178 SCCSSTDSRSPFDSTCRSYCSRRPRGTFFVYTCFASSPTLQPCATCSSRAPRCDS 342
+C + +P + C Y + TF+ C+ + ++C P+C S
Sbjct: 121 NCLQCSTCENPLSNKC-FYKDK----TFYCKGCYFRTHVTSTASSCRELGPKCAS 170
>AL132943-4|CAB81975.1| 690|Caenorhabditis elegans Hypothetical
protein Y116F11B.7 protein.
Length = 690
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 121 DALGRHSMAVALVYNTTLANSQNRADYSNFEE 26
+ALG + +AL+ N +LA N D+ FE+
Sbjct: 344 EALGDKILDLALILNLSLAYGSNAFDFPEFEK 375
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 273 MLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLPRSMSSHIPSRIPTPAITSAN 446
+LR +N+ L SC + N+ S PRSM+ ++P + A +AN
Sbjct: 175 ILRGSANSITLSRFFDSCLDRTRRTSLNSSSSSFFTKPRSMTPNLPGASASAAAAAAN 232
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Frame = -2
Query: 494 GVQSIRLSRHHHHGFRVGTC--DRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGAR 321
G R + HHH R D R D R R H + R DR R S+R R
Sbjct: 271 GADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREHREHKEHRRDDR--HRSERSERSER 328
Query: 320 LE 315
E
Sbjct: 329 SE 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,340,344
Number of Sequences: 27780
Number of extensions: 373819
Number of successful extensions: 1437
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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