Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5528
         (729 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024943-1|ABE01173.1| 1116|Drosophila melanogaster IP16022p pro...    29   4.9  
AE014134-2240|AAF53222.3| 1334|Drosophila melanogaster CG5792-PB...    29   4.9  
AY118985-1|AAM50845.1|  342|Drosophila melanogaster LP02169p pro...    29   8.6  
AF435923-1|AAL31569.1|  342|Drosophila melanogaster suppressor o...    29   8.6  
AE013599-595|AAF59129.1|  342|Drosophila melanogaster CG2160-PA ...    29   8.6  

>BT024943-1|ABE01173.1| 1116|Drosophila melanogaster IP16022p
           protein.
          Length = 1116

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 163 HRSTR-MNRTAYPLGHDDFNHCFTAEINRKSVHSN 62
           +R+TR +N  A+P GH+  N    A+ NRK+   N
Sbjct: 371 NRNTRNVNNQAFPQGHNHNNRNANAQFNRKTFDEN 405


>AE014134-2240|AAF53222.3| 1334|Drosophila melanogaster CG5792-PB,
           isoform B protein.
          Length = 1334

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 163 HRSTR-MNRTAYPLGHDDFNHCFTAEINRKSVHSN 62
           +R+TR +N  A+P GH+  N    A+ NRK+   N
Sbjct: 350 NRNTRNVNNQAFPQGHNHNNRNANAQFNRKTFDEN 384


>AY118985-1|AAM50845.1|  342|Drosophila melanogaster LP02169p
           protein.
          Length = 342

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 112 SRRGLKDKPSGSFVLSDAPVFESQAGTNF 198
           S+R L DKP+GSF++ D+    SQ   +F
Sbjct: 199 SQRQLSDKPTGSFLVRDSETSGSQFTLSF 227


>AF435923-1|AAL31569.1|  342|Drosophila melanogaster suppressor of
           cytokine signalingat 44A protein.
          Length = 342

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 112 SRRGLKDKPSGSFVLSDAPVFESQAGTNF 198
           S+R L DKP+GSF++ D+    SQ   +F
Sbjct: 199 SQRQLSDKPTGSFLVRDSETSGSQFTLSF 227


>AE013599-595|AAF59129.1|  342|Drosophila melanogaster CG2160-PA
           protein.
          Length = 342

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 112 SRRGLKDKPSGSFVLSDAPVFESQAGTNF 198
           S+R L DKP+GSF++ D+    SQ   +F
Sbjct: 199 SQRQLSDKPTGSFLVRDSETSGSQFTLSF 227


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,166,728
Number of Sequences: 53049
Number of extensions: 707222
Number of successful extensions: 1174
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)